Miyakogusa Predicted Gene

Lj2g3v2196580.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2196580.1 Non Chatacterized Hit- tr|I1MB68|I1MB68_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,81.48,0,PROTEIN_KINASE_DOM,Protein kinase, catalytic domain;
Protein kinase-like (PK-like),Protein kinase-li,CUFF.38717.1
         (1618 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66220 similar to UniRef100_A7QET5 Cluster: Chromosome...   876   0.0  
gnl|LJGI|TC71778 similar to UniRef100_A7QET5 Cluster: Chromosome...   351   9e-96
gnl|LJGI|FS358144 UniRef100_Q5GSK5 Cluster: DNA-directed RNA pol...   163   4e-39

>gnl|LJGI|TC66220 similar to UniRef100_A7QET5 Cluster: Chromosome chr16 scaffold_86,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_86, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (27%)
          Length = 767

 Score =  876 bits (442), Expect = 0.0
 Identities = 442/442 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatagtccaagatgagttcactgtgggaaggtcagggccatggcttggcatgctcaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atgatagtccaagatgagttcactgtgggaaggtcagggccatggcttggcatgctcaat 385

                                                                       
Query: 61  gatgcttgtgaaaatgcttacaaggcagtggccgtggaatttgacacaagaatgagccca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 gatgcttgtgaaaatgcttacaaggcagtggccgtggaatttgacacaagaatgagccca 445

                                                                       
Query: 121 gagtttggagatccaaatgacaatcatgttggtgtcaacttaggtagcatcatatctacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gagtttggagatccaaatgacaatcatgttggtgtcaacttaggtagcatcatatctacc 505

                                                                       
Query: 181 aaaatcatcaatgtttctgaatttggagtgtcccttaaggatggttttgttcaccatgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aaaatcatcaatgtttctgaatttggagtgtcccttaaggatggttttgttcaccatgct 565

                                                                       
Query: 241 tggatatcctatgatggtcctcagaggagaatggaaattcatcttggactacccaaccaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 tggatatcctatgatggtcctcagaggagaatggaaattcatcttggactacccaaccaa 625

                                                                       
Query: 301 gaactcaaaccttccaagccaatcttctcagaaacgttggatctctctccttatctcaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 gaactcaaaccttccaagccaatcttctcagaaacgttggatctctctccttatctcaat 685

                                                                       
Query: 361 gagtacatgtttgtggggttctcagcttccacaggtaaccacacccaaatccacaacata 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gagtacatgtttgtggggttctcagcttccacaggtaaccacacccaaatccacaacata 745

                                 
Query: 421 ctctcttggaacttcacttcca 442
           ||||||||||||||||||||||
Sbjct: 746 ctctcttggaacttcacttcca 767


>gnl|LJGI|TC71778 similar to UniRef100_A7QET5 Cluster: Chromosome chr16 scaffold_86,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_86, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (20%)
          Length = 614

 Score =  351 bits (177), Expect = 9e-96
 Identities = 180/181 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   atgatagtccaagatgagttcactgtgggaaggtcagggccatggcttggcatgctcaat 60
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 181 atgatagtccaagatgagttcactgtgggaaggtcacggccatggcttggcatgctcaat 122

                                                                       
Query: 61  gatgcttgtgaaaatgcttacaaggcagtggccgtggaatttgacacaagaatgagccca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gatgcttgtgaaaatgcttacaaggcagtggccgtggaatttgacacaagaatgagccca 62

                                                                       
Query: 121 gagtttggagatccaaatgacaatcatgttggtgtcaacttaggtagcatcatatctacc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  gagtttggagatccaaatgacaatcatgttggtgtcaacttaggtagcatcatatctacc 2

            
Query: 181 a 181
           |
Sbjct: 1   a 1


>gnl|LJGI|FS358144 UniRef100_Q5GSK5 Cluster: DNA-directed RNA polymerase sigma 32
            subunit  RpoH subfamily; n=1; Wolbachia endosymbiont,
            partial (3%)
          Length = 636

 Score =  163 bits (82), Expect = 4e-39
 Identities = 82/82 (100%)
 Strand = Plus / Minus

                                                                        
Query: 1537 agaactcgccctgttaccttgtttccttacaatagtgccaacactggactttgcaacaca 1596
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636  agaactcgccctgttaccttgtttccttacaatagtgccaacactggactttgcaacaca 577

                                  
Query: 1597 tactcttgcactttcaagtgaa 1618
            ||||||||||||||||||||||
Sbjct: 576  tactcttgcactttcaagtgaa 555