Miyakogusa Predicted Gene
- Lj2g3v2183210.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2183210.1 Non Chatacterized Hit- tr|D8R5X8|D8R5X8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,29.23,8e-17,VIT1,Domain of unknown function DUF125,
transmembrane; seg,NULL,CUFF.38696.1
(2904 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82442 homologue to UniRef100_Q9FYX3 Cluster: BAC19.3;... 1003 0.0
gnl|LJGI|TC82148 406 e-112
>gnl|LJGI|TC82442 homologue to UniRef100_Q9FYX3 Cluster: BAC19.3; n=1; Solanum
lycopersicum|Rep: BAC19.3 - Solanum lycopersicum
(Tomato) (Lycopersicon esculentum), partial (4%)
Length = 578
Score = 1003 bits (506), Expect = 0.0
Identities = 517/521 (99%)
Strand = Plus / Plus
Query: 1 atggagcaggaacaccatcaattcatagcacttcatgatgatgatgaagaagaagtagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 58 atggagcaggaacaccatcaattcatagcacttcatgatgatgatgaagaagaagtagaa 117
Query: 61 gtggaagatggtgctttgaaaacaaggcaatccctgccacatagcaaggaaacccttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 118 gtggaagatggtgctttgaaaacaaggcaatccctgccacatagcaaggaaacccttgtt 177
Query: 121 acagaagtggtagccaatgggggtgagcatagaaatggtgtttcctcagttgtcacagac 180
|||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 178 acagaagtggtacccaacgggggtgagcatacaaatggtgtttcctcagttgtcacagac 237
Query: 181 ctagatggatcttttgttcagaaagagaaggaagttgcagaaattggaagtgttggtgaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 ctagatggatcttttgttcagaaagagaaggaagttgcagaaattggaagtgttggtgaa 297
Query: 241 aataacagccattttcatgatgacagagtagatggtggtgcagctgttgggcttagaatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 aataacagccattttcatgatgacagagtagatggtggtgcagctgttgggcttagaatt 357
Query: 301 gtagcagagtttgtagaagcagcaaaaaatggagaagccatagctgatgctagtgttggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gtagcagagtttgtagaagcagcaaaaaatggagaagccatagctgatgctagtgttggt 417
Query: 361 gctgctgaatcacagaatgagaacagtgtttactttgacaagcaacaagacaataaaatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 gctgctgaatcacagaatgagaacagtgtttactttgacaagcaacaagacaataaaatc 477
Query: 421 aatggacttaatggatttcaaaatggagatgctgcaacttctgtcagtctgacgaatcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 aatggacttaatggatttcaaaatggagatgctgcaacttctgtcagtctgacgaatcct 537
Query: 481 ggggaaagcgattatgatgtacaaatagaaaattcagttac 521
| |||||||||||||||||||||||||||||||||||||||
Sbjct: 538 gnggaaagcgattatgatgtacaaatagaaaattcagttac 578
>gnl|LJGI|TC82148
Length = 471
Score = 406 bits (205), Expect = e-112
Identities = 237/245 (96%), Gaps = 2/245 (0%)
Strand = Plus / Plus
Query: 2662 tctgttgtatgcatcattctacttgctattgccaaagtttacaccaggaaaccacctaaa 2721
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 tctgttgtatgcatcattctacttgctattgcccaagtttacaccaggaaaccacctaaa 60
Query: 2722 tactactttaaaactatgttatactatgtggcattggcacttggagcctcaggaatatcc 2781
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 61 tactactttaaaactatgttatactatgtggccttggcacttggagcctcaggaatatcc 120
Query: 2782 tatatagcaggaatcctaatcaaggagcttctagagaaaatcagcaactccgagtcaggt 2841
|||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 tatatagccggaatcctaatcaaggagcttttagagaaaatcagcaactccgagtcaggt 180
Query: 2842 tttgcttttatcaccatgcccaattcagacacaagtatggaacca-gca-tggatgtctt 2899
||||||||||||||||||||| |||||||||| |||||||||||| ||| ||||||||||
Sbjct: 181 tttgcttttatcaccatgccccattcagacaccagtatggaaccacgcactggatgtctt 240
Query: 2900 actga 2904
|||||
Sbjct: 241 actga 245