Miyakogusa Predicted Gene

Lj2g3v2171880.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2171880.1 Non Chatacterized Hit- tr|D7LYB7|D7LYB7_ARALL
Putative uncharacterized protein OS=Arabidopsis
lyrata,58.21,8e-18,seg,NULL; DUF3133,Protein of unknown function
DUF3133; SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NU,CUFF.38808.1
         (3300 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS338120 weakly similar to UniRef100_A7QNA6 Cluster: Ch...   367   e-100
gnl|LJGI|TC69836                                                      119   1e-25

>gnl|LJGI|FS338120 weakly similar to UniRef100_A7QNA6 Cluster: Chromosome chr2
           scaffold_132, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr2 scaffold_132, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (4%)
          Length = 632

 Score =  367 bits (185), Expect = e-100
 Identities = 185/185 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctggtgaatcggctcccaaacctcgactagtattgtgtcctaaatgccggcaactt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 atgtctggtgaatcggctcccaaacctcgactagtattgtgtcctaaatgccggcaactt 507

                                                                       
Query: 61  cttccggagtctccagattatgatgtgtacaagtgtggaggatgtggcacgatccttcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 cttccggagtctccagattatgatgtgtacaagtgtggaggatgtggcacgatccttcaa 567

                                                                       
Query: 121 gctaagaaacgaagaagtagagctgtgaactcagaatccagctcacttcaaactgatgcc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gctaagaaacgaagaagtagagctgtgaactcagaatccagctcacttcaaactgatgcc 627

                
Query: 181 actcc 185
           |||||
Sbjct: 628 actcc 632


>gnl|LJGI|TC69836 
          Length = 579

 Score =  119 bits (60), Expect = 1e-25
 Identities = 62/63 (98%)
 Strand = Plus / Plus

                                                                        
Query: 3238 agacccaatggagaaaatgatctaagtcataactctcaacagagctcaagtgtcatgcat 3297
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    agacccnatggagaaaatgatctaagtcataactctcaacagagctcaagtgtcatgcat 60

               
Query: 3298 tga 3300
            |||
Sbjct: 61   tga 63