Miyakogusa Predicted Gene
- Lj2g3v2171850.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2171850.2 Non Chatacterized Hit- tr|I1JH54|I1JH54_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.18679
PE,82.82,0,DEAD-like helicases superfamily,Helicase, superfamily 1/2,
ATP-binding domain; PHD zinc finger,Zinc ,CUFF.38803.2
(3924 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76133 similar to UniRef100_A7Q3Y7 Cluster: Chromosome... 430 e-119
gnl|LJGI|DC598170 similar to UniRef100_Q7XJP0 Cluster: SNF2/SWI2... 404 e-111
gnl|LJGI|DC593101 similar to UniRef100_Q7XJP0 Cluster: SNF2/SWI2... 396 e-109
gnl|LJGI|BW596395 212 1e-53
>gnl|LJGI|TC76133 similar to UniRef100_A7Q3Y7 Cluster: Chromosome chr13 scaffold_48,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_48, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 501
Score = 430 bits (217), Expect = e-119
Identities = 223/225 (99%)
Strand = Plus / Plus
Query: 3700 ttgaacaggagcaggagcaaccattcattcattagtgggaacacaaaaaaccaagatcaa 3759
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct: 1 ttgaacaggagcaggagcaaccattcattcattagtgggaacacaaaaaaccgagatcca 60
Query: 3760 cctgttttgaccctgaaggatgttgagtccttgctgtcaagaacaccagtaaccatgcca 3819
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctgttttgaccctgaaggatgttgagtccttgctgtcaagaacaccagtaaccatgcca 120
Query: 3820 gaaagtgatgaaaatcctattgcaaatgcagacctgagaaactttccaccatcaatggct 3879
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaaagtgatgaaaatcctattgcaaatgcagacctgagaaactttccaccatcaatggct 180
Query: 3880 gcggctatagctgctgagaggagacttaatgatcataggacatga 3924
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcggctatagctgctgagaggagacttaatgatcataggacatga 225
>gnl|LJGI|DC598170 similar to UniRef100_Q7XJP0 Cluster: SNF2/SWI2 family global
transcription factor; n=1; Arabidopsis thaliana|Rep:
SNF2/SWI2 family global transcription factor -
Arabidopsis thaliana (Mouse-ear cress), partial (3%)
Length = 514
Score = 404 bits (204), Expect = e-111
Identities = 262/279 (93%), Gaps = 3/279 (1%)
Strand = Plus / Plus
Query: 1542 gctggcagaaaatgttgcattgatattgccttccaaaggaaagcaattctctggaacttc 1601
||||||||| ||||||||||| |||||||||||||||||||| |||||||||||||||||
Sbjct: 236 gctggcagagaatgttgcattcatattgccttccaaaggaaatcaattctctggaacttc 295
Query: 1602 tgcagttaagtcaaccagaaagcattttattgcaaaggttgatcg-ttgtcttgtgaaga 1660
||||||||||||||||||||||||||||||| ||||||||||||| || |||||||||||
Sbjct: 296 tgcagttaagtcaaccagaaagcattttatttcaaaggttgatcgtttttcttgtgaaga 355
Query: 1661 ggcaaaaaataagtggctgcgatgataaaaatttagaagtggcttctgcagaaccatcac 1720
|||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||
Sbjct: 356 ggcaaaaaataagtggctgcaatgacaaaaatttagaagtggcttctgcagaaccatcac 415
Query: 1721 atattgcatc--cagcctttcagaaaatgacttaaatgaggatttgaaatttgatgattt 1778
| |||||||| ||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 416 acattgcatctagagcctttcagaaaataacttaaatgaggatttggaatttgatgattt 475
Query: 1779 atcagccagtcctgtcaaatctctgatagcagaatgtga 1817
|||||| | |||||||||||||||||||||| |||||||
Sbjct: 476 atcagctaatcctgtcaaatctctgatagcaaaatgtga 514
Score = 331 bits (167), Expect = 2e-89
Identities = 186/191 (97%), Gaps = 1/191 (0%)
Strand = Plus / Plus
Query: 1215 gaatgctttactgaaacttcgtcaggcttgttgtcatccccaggttggaagttctggttt 1274
|||||||||||||||||||||| |||||||||||||||||| |||||| ||||||||||
Sbjct: 1 gaatgctttactgaaacttcgtg-ggcttgttgtcatccccatgttggatgttctggttt 59
Query: 1275 gcgttccctgcagcagtcacctatgaccatggaggaaatactaatggttcttataaataa 1334
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 60 gcgttccctgcagcagtcacctatgaccatggaggaaatattaatggttcttataaataa 119
Query: 1335 gaccaagatcgaaggggaggaagctcttaggaggttagttgtttctctgaatgggcttgc 1394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 gaccaagatcgaaggggaggaagctcttaggaggttagttgtttctctgaatgggcttgc 179
Query: 1395 agcaatagcta 1405
|||||||||||
Sbjct: 180 agcaatagcta 190
>gnl|LJGI|DC593101 similar to UniRef100_Q7XJP0 Cluster: SNF2/SWI2 family global
transcription factor; n=1; Arabidopsis thaliana|Rep:
SNF2/SWI2 family global transcription factor -
Arabidopsis thaliana (Mouse-ear cress), partial (7%)
Length = 549
Score = 396 bits (200), Expect = e-109
Identities = 227/235 (96%), Gaps = 2/235 (0%)
Strand = Plus / Plus
Query: 1 atgggcttgggtaaaactgttgaattgctcgcttgcatctatgctcaccggagatcagca 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 315 atgggcttgggtaaaactgttgaattgctcgcttgcatctttgctcaccggagatcagca 374
Query: 61 tctggaagcgacacactaattgagtcagtgccccaagttaacggggaccaaaatatcact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tctggaagcgacacactaattgagtcagtgccccaagttaacggggaccaaaatatcact 434
Query: 121 ttaaaaagactcaaaagagaacgagtggagtgcatatgtggggctgtgaacgaaagtatc 180
|||||||||||||||||||| |||| ||||||||||||||| |||||||| |||||||||
Sbjct: 435 ttaaaaagactcaaaagagagcgaggggagtgcatatgtggagctgtgaatgaaagtatc 494
Query: 181 aaatatcaagggc--tatgggttcaatgtgacatttgcgatgcttggcaacatgc 233
||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 495 aaatatcaagggctatatgggttcaatgtgacatttgcaatgcttggcaacatgc 549
>gnl|LJGI|BW596395
Length = 486
Score = 212 bits (107), Expect = 1e-53
Identities = 116/119 (97%)
Strand = Plus / Plus
Query: 2487 ggtttcaagatcagcatctgagttggagcttattcttggagctatgaagaactattgcaa 2546
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 ggttttaagatcagcatctgagttggagcttattcttggagctatgaagaactattgcaa 402
Query: 2547 ggctcggttaggcaggggcagtgtctcagcagccactaggcatttacatatgcttgagg 2605
||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 403 ggctctgttaggcaggggcagtgtctcagcagccaccaggcatttacatatgcttgagg 461
Score = 147 bits (74), Expect = 6e-34
Identities = 98/105 (93%), Gaps = 1/105 (0%)
Strand = Plus / Plus
Query: 913 ggagatattggagctatggaatttacacacacaattttcaagcaaatcatgtggcgttct 972
||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 8 ggagatattggagctgtggaatttacacacang-ttttcaagcaaatcatgtggcgttct 66
Query: 973 tctaaaaaacatgttgcagatgaattggaccttccatcccaagag 1017
|| ||||||||||||||||||||||||||| |||| |||||||||
Sbjct: 67 tcgaaaaaacatgttgcagatgaattggacattccctcccaagag 111