Miyakogusa Predicted Gene

Lj2g3v2161680.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2161680.1 Non Chatacterized Hit- tr|I1LC10|I1LC10_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,42.39,0.0000003,seg,NULL,
gene.Ljchr2_pseudomol_20120830.path1.gene6076.1
         (552 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC80208                                                      145   3e-34
gnl|LJGI|BP038600                                                      54   9e-07
gnl|LJGI|TC74643 similar to UniRef100_A7PHE6 Cluster: Chromosome...    54   9e-07

>gnl|LJGI|TC80208 
          Length = 931

 Score =  145 bits (73), Expect = 3e-34
 Identities = 76/77 (98%)
 Strand = Plus / Plus

                                                                       
Query: 469 agggagaaaacactggatgattctttggtgctgcgaatcagtgaaaggaagatccttcaa 528
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 719 agggagaaaacactggatgattctttggtgctgcgaatcagcgaaaggaagatccttcaa 778

                            
Query: 529 tcggaaattatgcttca 545
           |||||||||||||||||
Sbjct: 779 tcggaaattatgcttca 795



 Score = 52.0 bits (26), Expect = 4e-06
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                 
Query: 55  gaaggaactgcgaagcccattttgatggagcttcaaga 92
           ||||||| |||||||||||||||||  |||||||||||
Sbjct: 158 gaaggaattgcgaagcccattttgacagagcttcaaga 195


>gnl|LJGI|BP038600 
          Length = 558

 Score = 54.0 bits (27), Expect = 9e-07
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 126 agagggaaaacactggtcactaagcggaagcagaggtggagttgaag 172
           |||||||||||||||||||| ||| ||| ||||||| ||||| ||||
Sbjct: 143 agagggaaaacactggtcaccaaggggaggcagaggcggagtggaag 189


>gnl|LJGI|TC74643 similar to UniRef100_A7PHE6 Cluster: Chromosome chr17 scaffold_16,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr17 scaffold_16, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 1106

 Score = 54.0 bits (27), Expect = 9e-07
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 126 agagggaaaacactggtcactaagcggaagcagaggtggagttgaag 172
           |||||||||||||||||||| ||| ||| ||||||| ||||| ||||
Sbjct: 143 agagggaaaacactggtcaccaaggggaggcagaggcggagtggaag 189