Miyakogusa Predicted Gene
- Lj2g3v2124820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2124820.1 Non Chatacterized Hit- tr|J3L112|J3L112_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB01G2,49.56,8e-18,seg,NULL; Tudor/PWWP/MBT,NULL; PWWP,PWWP; no
description,NULL,CUFF.38604.1
(1875 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP034706 similar to UniRef100_A7PBE8 Cluster: Chromosom... 1035 0.0
gnl|LJGI|TC74554 similar to UniRef100_A7PBE8 Cluster: Chromosome... 262 7e-69
gnl|LJGI|BP074951 weakly similar to UniRef100_A7PBE8 Cluster: Ch... 111 2e-23
>gnl|LJGI|BP034706 similar to UniRef100_A7PBE8 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 549
Score = 1035 bits (522), Expect = 0.0
Identities = 522/522 (100%)
Strand = Plus / Minus
Query: 1354 tttggctttgagggaagtgcggtgcttccaccagcttggaggactgcgaggagaacagca 1413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 tttggctttgagggaagtgcggtgcttccaccagcttggaggactgcgaggagaacagca 490
Query: 1414 aatgttcgcgttcctcgtccgcatatacttggtgctgaaactgtggcagatttctcctta 1473
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aatgttcgcgttcctcgtccgcatatacttggtgctgaaactgtggcagatttctcctta 430
Query: 1474 gatcaagaaagaaatactgaatacaagaaattgaatggtggaagtttcagtcataataag 1533
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gatcaagaaagaaatactgaatacaagaaattgaatggtggaagtttcagtcataataag 370
Query: 1534 gcaagccttccgaggaaaagtggccataacagtgttggaccttcaatcaacaacaagtcc 1593
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gcaagccttccgaggaaaagtggccataacagtgttggaccttcaatcaacaacaagtcc 310
Query: 1594 ttcaaaaagacgccgaagaaagtgagcttgtcatctagtcagaaaactagaactctctcc 1653
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ttcaaaaagacgccgaagaaagtgagcttgtcatctagtcagaaaactagaactctctcc 250
Query: 1654 tcattatctgctgaacatcatagtaaaaagccatcacttggtagaagttttcatcaaaca 1713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tcattatctgctgaacatcatagtaaaaagccatcacttggtagaagttttcatcaaaca 190
Query: 1714 gaaaggttgactaaaccagaggtctctgggctcaccactgtagcttgcataccagttaaa 1773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gaaaggttgactaaaccagaggtctctgggctcaccactgtagcttgcataccagttaaa 130
Query: 1774 ttagtatttagtagattacttgagaagattaataggccacctctaagagcagctaataac 1833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 ttagtatttagtagattacttgagaagattaataggccacctctaagagcagctaataac 70
Query: 1834 gcagctttgttgaatactgctatggagagaaactcataggtt 1875
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 gcagctttgttgaatactgctatggagagaaactcataggtt 28
>gnl|LJGI|TC74554 similar to UniRef100_A7PBE8 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 575
Score = 262 bits (132), Expect = 7e-69
Identities = 279/328 (85%)
Strand = Plus / Plus
Query: 40 ggatccattgtgtgggtccgacgacggaacgggtcgtggtggccggggcaaatacttgac 99
|||||||| ||||||||||||||||| |||||||||||||||||||| |||||||||| |
Sbjct: 224 ggatccatcgtgtgggtccgacgacgaaacgggtcgtggtggccgggtcaaatacttggc 283
Query: 100 tccgatgaccattctacttctcatctcacctcacctcgatcaggaactcccgttaagctt 159
|||||| | || |||||||||||||||| |||||||||||||| ||||| ||||||
Sbjct: 284 ctcgatgatctctccgcttctcatctcacctctcctcgatcaggaacccccgtcaagctt 343
Query: 160 ctcggcagggaagatgcaagcgtagattggtacaatttggagaaatccaagcgtgtgaag 219
|||||| ||||||| || ||||| ||||||||||||||||||||||| |||||||| |||
Sbjct: 344 ctcggccgggaagacgccagcgtggattggtacaatttggagaaatctaagcgtgttaag 403
Query: 220 ccattccgatgtggtgaatttgatgcatgtattgaaagggcggagtcagcacatggtatg 279
| ||||||||||| || ||||||| |||||||| | ||| ||||| || || || |
Sbjct: 404 gcgttccgatgtggcgagtttgatgattgtattgagaaggctgagtccgctcagggggcg 463
Query: 280 ccattaaaaaagagagagaaatatgcacgtagagaagatgctatcctccatgctcttgaa 339
|| || || || || ||||||||||| ||| |||||||||| || || ||||| ||||||
Sbjct: 464 ccgttgaagaaaagggagaaatatgcgcgtcgagaagatgccattcttcatgcccttgaa 523
Query: 340 cttgagaagcaaatgttgaagaagcaag 367
|| |||| |||||||||| |||||||||
Sbjct: 524 ctcgagaggcaaatgttgcagaagcaag 551
>gnl|LJGI|BP074951 weakly similar to UniRef100_A7PBE8 Cluster: Chromosome chr16
scaffold_10, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr16 scaffold_10, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (3%)
Length = 531
Score = 111 bits (56), Expect = 2e-23
Identities = 199/244 (81%), Gaps = 7/244 (2%)
Strand = Plus / Minus
Query: 1616 tgagcttgtcatctagtcagaaaactagaactctctcctcattatctgctgaacat---c 1672
||||||||||||||| ||||| ||||||||||| |||||||||||| |||||||| |
Sbjct: 374 tgagcttgtcatctaaccagaagactagaactctttcctcattatctactgaacatagtc 315
Query: 1673 atagtaaaaagccatcacttggtagaag---ttttcatcaaacagaaaggttgactaaac 1729
||||| ||||||||||| || ||| || | | ||| |||||| || |||| |||||
Sbjct: 314 ttagtagaaagccatcacatgatagcagcagtagttatccaacagatagattgattaaac 255
Query: 1730 cagaggtctctgggctcaccactgtagcttgcataccagttaaattagtatttagtagat 1789
|||| | |||| || |||| | |||||||||||||||| | ||||||||||||||||
Sbjct: 254 cagaaatttctgtgcccacccccctagcttgcataccagtccagttagtatttagtagat 195
Query: 1790 tacttgagaagattaataggcc-acctctaagagcagctaataacgcagctttgttgaat 1848
|||||||||||| ||| ||||| || ||| ||||||| ||| ||||||||| |||||
Sbjct: 194 tacttgagaagaataacaggcctcccattaaaggcagctagtaatgcagctttgctgaat 135
Query: 1849 actg 1852
||||
Sbjct: 134 actg 131