Miyakogusa Predicted Gene
- Lj2g3v2124190.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2124190.1 Non Chatacterized Hit- tr|C6SX87|C6SX87_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.54882
PE,94,4e-19,Cytochrome c,Cytochrome c domain; CYTCHRMECIAB,Cytochrome
c, class IA/ IB; SUBFAMILY NOT NAMED,NULL;,CUFF.38579.1
(153 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP064293 homologue to UniRef100_P00062 Cluster: Cytochr... 303 2e-82
gnl|LJGI|TC62353 homologue to UniRef100_P62772 Cluster: Cytochro... 303 2e-82
gnl|LJGI|TC62230 homologue to UniRef100_A7PPW4 Cluster: Chromoso... 157 2e-38
>gnl|LJGI|BP064293 homologue to UniRef100_P00062 Cluster: Cytochrome c; n=1; Sambucus
nigra|Rep: Cytochrome c - Sambucus nigra (European
elder), partial (68%)
Length = 505
Score = 303 bits (153), Expect = 2e-82
Identities = 153/153 (100%)
Strand = Plus / Minus
Query: 1 atggctgtgaattgggaggagaagactttgtacgattacttgcttaaccctaaaaagtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atggctgtgaattgggaggagaagactttgtacgattacttgcttaaccctaaaaagtat 284
Query: 61 attccagggacaaagatggtatttcctggtcttaagaagccccaagaacgtgctgatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 attccagggacaaagatggtatttcctggtcttaagaagccccaagaacgtgctgatctt 224
Query: 121 attgcgtacctgaaagaagccacagcacagtga 153
|||||||||||||||||||||||||||||||||
Sbjct: 223 attgcgtacctgaaagaagccacagcacagtga 191
>gnl|LJGI|TC62353 homologue to UniRef100_P62772 Cluster: Cytochrome c; n=2;
Brassica|Rep: Cytochrome c - Brassica napus (Rape),
complete
Length = 685
Score = 303 bits (153), Expect = 2e-82
Identities = 153/153 (100%)
Strand = Plus / Plus
Query: 1 atggctgtgaattgggaggagaagactttgtacgattacttgcttaaccctaaaaagtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 atggctgtgaattgggaggagaagactttgtacgattacttgcttaaccctaaaaagtat 342
Query: 61 attccagggacaaagatggtatttcctggtcttaagaagccccaagaacgtgctgatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 attccagggacaaagatggtatttcctggtcttaagaagccccaagaacgtgctgatctt 402
Query: 121 attgcgtacctgaaagaagccacagcacagtga 153
|||||||||||||||||||||||||||||||||
Sbjct: 403 attgcgtacctgaaagaagccacagcacagtga 435
>gnl|LJGI|TC62230 homologue to UniRef100_A7PPW4 Cluster: Chromosome chr18
scaffold_24, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr18 scaffold_24, whole genome
shotgun sequence - Vitis vinifera (Grape), complete
Length = 715
Score = 157 bits (79), Expect = 2e-38
Identities = 121/135 (89%)
Strand = Plus / Plus
Query: 1 atggctgtgaattgggaggagaagactttgtacgattacttgcttaaccctaaaaagtat 60
|||||||||| ||||||||||||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 252 atggctgtgatttgggaggagaagaccttgtatgattacttgcttaaccccaaaaagtac 311
Query: 61 attccagggacaaagatggtatttcctggtcttaagaagccccaagaacgtgctgatctt 120
||||||||||| |||||||| ||||||||||| |||||||| || || |||||||||||
Sbjct: 312 attccagggacgaagatggtgtttcctggtctcaagaagccacaggatcgtgctgatctg 371
Query: 121 attgcgtacctgaaa 135
||||| || ||||||
Sbjct: 372 attgcatatctgaaa 386