Miyakogusa Predicted Gene

Lj2g3v2103090.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2103090.1 Non Chatacterized Hit- tr|I1M4S0|I1M4S0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.26361
PE,85.11,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
PPR,Pentatricopeptide repeat; PPR: pentatricopeptid,CUFF.38583.1
         (2025 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS318362 weakly similar to UniRef100_A7R3R7 Cluster: Ch...  1495   0.0  
gnl|LJGI|FS354774 similar to UniRef100_A2Q3P0 Cluster: Tetratric...    60   6e-08

>gnl|LJGI|FS318362 weakly similar to UniRef100_A7R3R7 Cluster: Chromosome undetermined
           scaffold_560, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_560,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (35%)
          Length = 792

 Score = 1495 bits (754), Expect = 0.0
 Identities = 754/754 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgttctctgcatccaccaagattcgtagagccttctcctcttcctctcaattccgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39  atggcgttctctgcatccaccaagattcgtagagccttctcctcttcctctcaattccgc 98

                                                                       
Query: 61  cacgacaaccttctttcttcttcacccaacaatctcaatgccaaaaccaacaacaacttc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99  cacgacaaccttctttcttcttcacccaacaatctcaatgccaaaaccaacaacaacttc 158

                                                                       
Query: 121 gaggaagccattaatgccttatgtcaacaaaaacgcctcaaggaagccgttgacttgctc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gaggaagccattaatgccttatgtcaacaaaaacgcctcaaggaagccgttgacttgctc 218

                                                                       
Query: 181 caccacgttgaccgaccctcccctcgtctctactccaccctcattgctgcttgcgttcgc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 caccacgttgaccgaccctcccctcgtctctactccaccctcattgctgcttgcgttcgc 278

                                                                       
Query: 241 catcgagctcttgaacaaggcagaagagtccatgctctcacaaaatcatctaatttcatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 catcgagctcttgaacaaggcagaagagtccatgctctcacaaaatcatctaatttcatt 338

                                                                       
Query: 301 cctgggattttcatttccaatcgtttgcttgacttgtatgccaaatgtgggagtttagcg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 cctgggattttcatttccaatcgtttgcttgacttgtatgccaaatgtgggagtttagcg 398

                                                                       
Query: 361 gatgctcagaggctgtttgatgaaatgggtgatagagatttgtgttcctggaatactatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 gatgctcagaggctgtttgatgaaatgggtgatagagatttgtgttcctggaatactatg 458

                                                                       
Query: 421 atagctggttatgctaagcttggctggcttgaacaagctcggaagctgtttgatgaaatg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 atagctggttatgctaagcttggctggcttgaacaagctcggaagctgtttgatgaaatg 518

                                                                       
Query: 481 cctcgcagggatcatttttcttggaatgctgctatatcgggttatgttagccatggtcga 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 cctcgcagggatcatttttcttggaatgctgctatatcgggttatgttagccatggtcga 578

                                                                       
Query: 541 cctcgggaggctttggagatgtttaggatgatgcagaagcatgagagttcgaattcgaat 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 cctcgggaggctttggagatgtttaggatgatgcagaagcatgagagttcgaattcgaat 638

                                                                       
Query: 601 aagtttaccttgtccagtggtttggctgctgcagctgctattccgtgtttgcgtctcggg 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 aagtttaccttgtccagtggtttggctgctgcagctgctattccgtgtttgcgtctcggg 698

                                                                       
Query: 661 aaagaaattcacggttacttggtacgggctgggttggacttggatgaggtggtttggagt 720
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 aaagaaattcacggttacttggtacgggctgggttggacttggatgaggtggtttggagt 758

                                             
Query: 721 gctcttttggatttgtatggcaagtgtgggagtt 754
           ||||||||||||||||||||||||||||||||||
Sbjct: 759 gctcttttggatttgtatggcaagtgtgggagtt 792


>gnl|LJGI|FS354774 similar to UniRef100_A2Q3P0 Cluster: Tetratricopeptide-like helical;
            n=1; Medicago truncatula|Rep: Tetratricopeptide-like
            helical - Medicago truncatula (Barrel medic), partial
            (27%)
          Length = 692

 Score = 60.0 bits (30), Expect = 6e-08
 Identities = 33/34 (97%)
 Strand = Plus / Minus

                                              
Query: 1814 accacagtgagaagcttgctgttgcctttgggat 1847
            |||||||||||||||| |||||||||||||||||
Sbjct: 345  accacagtgagaagctggctgttgcctttgggat 312