Miyakogusa Predicted Gene
- Lj2g3v2103080.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2103080.1 tr|D7MNI9|D7MNI9_ARALL Peptidyl-prolyl cis-trans
isomerase OS=Arabidopsis lyrata subsp. lyrata
GN=AR,45.83,3e-16,coiled-coil,NULL; FKBP_PPIASE,Peptidyl-prolyl
cis-trans isomerase, FKBP-type, domain; no description,CUFF.38569.1
(1089 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81810 similar to UniRef100_A7QGT1 Cluster: Peptidyl-p... 916 0.0
gnl|LJGI|TC60967 weakly similar to UniRef100_Q9STK2 Cluster: Pep... 769 0.0
>gnl|LJGI|TC81810 similar to UniRef100_A7QGT1 Cluster: Peptidyl-prolyl cis-trans
isomerase; n=1; Vitis vinifera|Rep: Peptidyl-prolyl
cis-trans isomerase - Vitis vinifera (Grape), partial
(90%)
Length = 664
Score = 916 bits (462), Expect = 0.0
Identities = 462/462 (100%)
Strand = Plus / Plus
Query: 628 acccaggagtctgaaggagtagccactggaaatcaagttgctacacctgttgagaaacag 687
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acccaggagtctgaaggagtagccactggaaatcaagttgctacacctgttgagaaacag 60
Query: 688 aatttgcttaccactgagaaaaaagggaaggaacagagtgaagccaagccatctcatatc 747
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aatttgcttaccactgagaaaaaagggaaggaacagagtgaagccaagccatctcatatc 120
Query: 748 agaacctttgcaaatgggttggttatagaggagctatccatgggtaaaccagatggcaaa 807
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agaacctttgcaaatgggttggttatagaggagctatccatgggtaaaccagatggcaaa 180
Query: 808 agagctactcctggacaaaaggtcagtgttaaatacattggcaagctgaaaaagaatgac 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 agagctactcctggacaaaaggtcagtgttaaatacattggcaagctgaaaaagaatgac 240
Query: 868 aaaatatttgactcaaatgtgggaaaagcaccctttaaattccgcctaggtatagggcaa 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaatatttgactcaaatgtgggaaaagcaccctttaaattccgcctaggtatagggcaa 300
Query: 928 gtcatcaaggggtgggatgttggtgtcaatgggatgagggttggggacaaaagaagaatc 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gtcatcaaggggtgggatgttggtgtcaatgggatgagggttggggacaaaagaagaatc 360
Query: 988 acaattccaccatctatgggatatgccgacaaacgcgtcggaagtataccagcaaattcg 1047
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acaattccaccatctatgggatatgccgacaaacgcgtcggaagtataccagcaaattcg 420
Query: 1048 tggcttgtatttgatgtggagttagttggtgttggtcgctga 1089
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tggcttgtatttgatgtggagttagttggtgttggtcgctga 462
>gnl|LJGI|TC60967 weakly similar to UniRef100_Q9STK2 Cluster: Peptidyl-prolyl
cis-trans isomerase; n=1; Arabidopsis thaliana|Rep:
Peptidyl-prolyl cis-trans isomerase - Arabidopsis
thaliana (Mouse-ear cress), partial (22%)
Length = 1114
Score = 769 bits (388), Expect = 0.0
Identities = 388/388 (100%)
Strand = Plus / Plus
Query: 1 atgtacccatcttcgccagtcccaaacagtggagttataattgaggaaatagtagacgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 atgtacccatcttcgccagtcccaaacagtggagttataattgaggaaatagtagacgaa 571
Query: 61 cctgagaatgagaatggagatgattcgaataagcaattgaagaaaaaggaacaggtgcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 cctgagaatgagaatggagatgattcgaataagcaattgaagaaaaaggaacaggtgcct 631
Query: 121 cgcttgaaagagaaacacagcaaaggttctcagcttcaaattgtcaataagggggagaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 cgcttgaaagagaaacacagcaaaggttctcagcttcaaattgtcaataagggggagaat 691
Query: 181 gaccttgttttggaaagtgaagatgaagacggctttccactttccaatgcagagaaaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gaccttgttttggaaagtgaagatgaagacggctttccactttccaatgcagagaaaggt 751
Query: 241 aaatctgaatctgagtctcagaaggctgaatcagaaataaaagaccagactaagagaact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 aaatctgaatctgagtctcagaaggctgaatcagaaataaaagaccagactaagagaact 811
Query: 301 aacaaggccaataagaaggcgaaagatgttgatcattccgcgaccttaaaacgaaaagtc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 aacaaggccaataagaaggcgaaagatgttgatcattccgcgaccttaaaacgaaaagtc 871
Query: 361 gaaagtgtcgttgaagatgagcagctgc 388
||||||||||||||||||||||||||||
Sbjct: 872 gaaagtgtcgttgaagatgagcagctgc 899
Score = 212 bits (107), Expect = 3e-54
Identities = 144/151 (95%), Gaps = 4/151 (2%)
Strand = Plus / Plus
Query: 452 ctcatgcatctgcaaagagcaatgagactaacgttaatacaccag-ttgaaaaa-ca-ta 508
||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||
Sbjct: 964 ctcatgcatctgcaaagagcaatgagactaacgttaatacaccagattgaaaaagcagta 1023
Query: 509 a-tgaggaggctgaaactacaccagatctgaacaacgtctctcattcaaaggatgggcat 567
| ||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 1024 agtgaggaggctgaaactacaccagatctgaacaatgtctctcatgtaaaggatgggcat 1083
Query: 568 gatggaaaactatccaataacgaggttgttg 598
|||||||||||||||||||||||||||||||
Sbjct: 1084 gatggaaaactatccaataacgaggttgttg 1114