Miyakogusa Predicted Gene
- Lj2g3v2102980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2102980.1 Non Chatacterized Hit- tr|I1N3L5|I1N3L5_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,31.74,3e-19,PPR,Pentatricopeptide repeat; PPR_2,Pentatricopeptide
repeat; PPR_1,Pentatricopeptide repeat; PPR: p,CUFF.38691.1
(626 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO037297 weakly similar to UniRef100_A7Q622 Cluster: Ch... 264 6e-70
gnl|LJGI|FS341384 weakly similar to UniRef100_A7Q622 Cluster: Ch... 143 1e-33
gnl|LJGI|FS333759 weakly similar to UniRef100_A7Q622 Cluster: Ch... 135 4e-31
gnl|LJGI|FS336741 weakly similar to UniRef100_A7QVP2 Cluster: Ch... 131 6e-30
gnl|LJGI|GO030841 weakly similar to UniRef100_A7R617 Cluster: Ch... 121 5e-27
gnl|LJGI|TC69898 similar to UniRef100_A7QPA9 Cluster: Chromosome... 96 3e-19
gnl|LJGI|FS342564 weakly similar to UniRef100_A7Q622 Cluster: Ch... 76 3e-13
gnl|LJGI|AV429083 weakly similar to UniRef100_A7QQ24 Cluster: Ch... 76 3e-13
gnl|LJGI|TC77080 weakly similar to UniRef100_A7QVP2 Cluster: Chr... 56 3e-07
>gnl|LJGI|GO037297 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 537
Score = 264 bits (133), Expect = 6e-70
Identities = 304/361 (84%)
Strand = Plus / Plus
Query: 65 atgtggtaatgtacaacacaatcattgatagcttgtgtaaagataaacttgtaaatgatg 124
||||||| ||||||| |||||||||||||||| | || |||||||||||||||| |||||
Sbjct: 173 atgtggtcatgtacagcacaatcattgatagcctctgcaaagataaacttgtaagtgatg 232
Query: 125 cctacaatctattttctgaaatggttaccaagagaatatcacctactgttatcacttaca 184
||| | || ||| ||| |||||||| ||||||||| || ||||||||| |||||| ||
Sbjct: 233 cctgcgatttatattcggaaatggtactcaagagaatttctcctactgttgtcactttca 292
Query: 185 atactctaatatttggcttttgcattgtgggtcaaatggaagcagcggtttgtttgttaa 244
|| ||||||| | |||||||||||||||||||||| || ||| ||| ||| ||||| |||
Sbjct: 293 atgctctaatttatggcttttgcattgtgggtcaattgaaagaagcagttggtttgctaa 352
Query: 245 atgaaatggtattgaaaagcatcaatccagatgtaattacctttaatacattagttgatg 304
|||||||||| ||||||| |||||| ||| ||| | ||| ||||||| | |||||||
Sbjct: 353 atgaaatggtgttgaaaaacatcaacccaattgttaatacttttaatattctggttgatg 412
Query: 305 ctttatccaaggaaggaagggtgaaagaagccaaaaatgtgttagctgtgatgatcaaag 364
|||| |||||||||| |||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 413 ggttatgtaaggaaggaaaggtgaaagaagctaaaaatgtgttagctgtgatgatgaaag 472
Query: 365 aaggggaaaaacctaatgttgttacttataattctttgatggatgggtattgcttagtta 424
|||| | ||| ||| || || | ||||| |||||| | ||||||||||||||| ||||||
Sbjct: 473 aaggtgtaaagcctgatattttcacttacaattctatcatggatgggtattgcctagtta 532
Query: 425 a 425
|
Sbjct: 533 a 533
>gnl|LJGI|FS341384 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 802
Score = 143 bits (72), Expect = 1e-33
Identities = 171/204 (83%)
Strand = Plus / Plus
Query: 59 aacctaatgtggtaatgtacaacacaatcattgatagcttgtgtaaagataaacttgtaa 118
||||| ||||||||||||||| || |||||||||||| |||||||||||||||||||||
Sbjct: 550 aacctgatgtggtaatgtacagcatcatcattgatagcctgtgtaaagataaacttgtaa 609
Query: 119 atgatgcctacaatctattttctgaaatggttaccaagagaatatcacctactgttatca 178
|||||| | |||| ||| |||||||||| || |||| ||||||| ||| |||| |||
Sbjct: 610 gtgatgcttgcaatttatattctgaaatgattgtcaagggaatatctcctgatgttgtca 669
Query: 179 cttacaatactctaatatttggcttttgcattgtgggtcaaatggaagcagcggtttgtt 238
| |||||| || |||||| ||||||||||||||| |||||| || || ||| || | |
Sbjct: 670 cgtacaatgctttaatatatggcttttgcattgttggtcaattgaaacaagcaattgggt 729
Query: 239 tgttaaatgaaatggtattgaaaa 262
|| || ||||||||||||||||||
Sbjct: 730 tgctagatgaaatggtattgaaaa 753
>gnl|LJGI|FS333759 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (21%)
Length = 766
Score = 135 bits (68), Expect = 4e-31
Identities = 125/144 (86%)
Strand = Plus / Plus
Query: 61 cctaatgtggtaatgtacaacacaatcattgatagcttgtgtaaagataaacttgtaaat 120
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| | |
Sbjct: 619 cctaatgtggtaatgtacaacactatcattgatagcttgtgcaaagataaacttgttagt 678
Query: 121 gatgcctacaatctattttctgaaatggttaccaagagaatatcacctactgttatcact 180
||||| | ||| ||| ||||||||||||| |||||||| | | |||| |||| |||||
Sbjct: 679 gatgcgtttaatttatattctgaaatggttgccaagagagttttacctgatgttttcact 738
Query: 181 tacaatactctaatatttggcttt 204
|||||| || |||||| |||||||
Sbjct: 739 tacaatgctttaatatatggcttt 762
>gnl|LJGI|FS336741 weakly similar to UniRef100_A7QVP2 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (30%)
Length = 760
Score = 131 bits (66), Expect = 6e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 59 aacctaatgtggtaatgtacaacacaatcattgatagcttgtgtaaagataaacttgtaa 118
||||| ||||||||||||||| ||||||||| |||||| |||||||||||||||||||||
Sbjct: 603 aacctgatgtggtaatgtacagcacaatcatcgatagcctgtgtaaagataaacttgtaa 662
Query: 119 atgatgcctacaatctattttctgaaatggttaccaagagaatatcacctactgttatca 178
| |||| | |||| ||| |||||||||| || ||||| ||||||| |||| ||| |||
Sbjct: 663 gtcatgcttgcaatttatattctgaaatgcttgccaagggaatatctcctaatgtagtca 722
Query: 179 cttacaatactctaatatttggcttttgcattgt 212
| |||| | || |||||| |||||||||||||||
Sbjct: 723 cgtacagtgctttaatatatggcttttgcattgt 756
>gnl|LJGI|GO030841 weakly similar to UniRef100_A7R617 Cluster: Chromosome undetermined
scaffold_1129, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_1129,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 688
Score = 121 bits (61), Expect = 5e-27
Identities = 61/61 (100%)
Strand = Plus / Minus
Query: 566 caattctttattggatgctttatgcaaaagccatcatgttgacagggcaatttctttgat 625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 caattctttattggatgctttatgcaaaagccatcatgttgacagggcaatttctttgat 498
Query: 626 c 626
|
Sbjct: 497 c 497
>gnl|LJGI|TC69898 similar to UniRef100_A7QPA9 Cluster: Chromosome chr18 scaffold_137,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_137, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 939
Score = 95.6 bits (48), Expect = 3e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 339 aaatgtgttagctgtgatgatcaaagaaggggaaaaacctaatgttgttacttataattc 398
||||||||||||||| |||||||||| |||||||||||||||||| |||||||||| |||
Sbjct: 876 aaatgtgttagctgtcatgatcaaaggaggggaaaaacctaatgtggttacttatagttc 935
Query: 399 tttg 402
||||
Sbjct: 936 tttg 939
>gnl|LJGI|FS342564 weakly similar to UniRef100_A7Q622 Cluster: Chromosome chr14
scaffold_54, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_54, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (22%)
Length = 785
Score = 75.8 bits (38), Expect = 3e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 65 atgtggtaatgtacaacacaatcattgatagcttgtgtaaagataaacttgtaaatgatg 124
|||||||||||||||| | |||||||| ||||||| |||||||||||||||| ||||
Sbjct: 651 atgtggtaatgtacaattctatcattgactgcttgtgcaaagataaacttgtaaccgatg 710
Query: 125 cctacaatctattttctgaaatggtt 150
|||| ||||| |||||||||||||
Sbjct: 711 cctatgatctacattctgaaatggtt 736
>gnl|LJGI|AV429083 weakly similar to UniRef100_A7QQ24 Cluster: Chromosome chr2
scaffold_140, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_140, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 300
Score = 75.8 bits (38), Expect = 3e-13
Identities = 112/136 (82%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 236 gtttgttaaatgaaatggtattgaaaagca---tcaatccagatgtaattacctttaata 292
||||||| || ||||||| |||||||| || |||| |||||||| |||||||||||
Sbjct: 1 gtttgttcaaggaaatggaattgaaaaacaacatcaaaccagatgtttctacctttaata 60
Query: 293 cattagttgatgctttatccaaggaaggaagggtgaaagaagccaaaaatgtgttagctg 352
||| ||||||||||||| ||| |||||| ||||||| | || || |||||||| ||||
Sbjct: 61 tattggttgatgctttatgtaagaaaggaaaggtgaaacatgctaagaatgtgttggctg 120
Query: 353 tgatgatcaaagaagg 368
||||||| ||| ||||
Sbjct: 121 tgatgataaaacaagg 136
>gnl|LJGI|TC77080 weakly similar to UniRef100_A7QVP2 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (19%)
Length = 898
Score = 56.0 bits (28), Expect = 3e-07
Identities = 109/136 (80%)
Strand = Plus / Plus
Query: 72 aatgtacaacacaatcattgatagcttgtgtaaagataaacttgtaaatgatgcctacaa 131
||||||||| ||||||||| | ||| |||| |||||||| ||||| |||||| || |
Sbjct: 511 aatgtacaatacaatcattaaaagcatgtgcgaagataaatgtgtaagtgatgcgtatga 570
Query: 132 tctattttctgaaatggttaccaagagaatatcacctactgttatcacttacaatactct 191
| ||| | ||||||| || ||||||||| || || |||| ||||||||||||||||
Sbjct: 571 tttatataatgaaatgcttctcaagagaatttctccagatgttttcacttacaatactct 630
Query: 192 aatatttggcttttgc 207
||| | ||||||||||
Sbjct: 631 aatctatggcttttgc 646