Miyakogusa Predicted Gene
- Lj2g3v2099820.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2099820.1 Non Chatacterized Hit- tr|C6TEP8|C6TEP8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.32168
PE,85.99,0,PORPHBDMNASE,Tetrapyrrole biosynthesis, hydroxymethylbilane
synthase; SUBFAMILY NOT NAMED,NULL; PORP,CUFF.38566.1
(1038 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC64001 homologue to UniRef100_Q43082 Cluster: Porphobi... 2050 0.0
gnl|LJGI|TC72216 similar to UniRef100_Q43082 Cluster: Porphobili... 948 0.0
gnl|LJGI|DC594099 homologue to UniRef100_Q43082 Cluster: Porphob... 349 2e-95
gnl|LJGI|BW629120 similar to UniRef100_Q43082 Cluster: Porphobil... 180 1e-44
gnl|LJGI|AV775945 UniRef100_Q43082 Cluster: Porphobilinogen deam... 178 5e-44
>gnl|LJGI|TC64001 homologue to UniRef100_Q43082 Cluster: Porphobilinogen deaminase,
chloroplast precursor; n=1; Pisum sativum|Rep:
Porphobilinogen deaminase, chloroplast precursor - Pisum
sativum (Garden pea), partial (85%)
Length = 1570
Score = 2050 bits (1034), Expect = 0.0
Identities = 1037/1038 (99%)
Strand = Plus / Plus
Query: 1 atgaattccctttctccaatcacactccatgcccctttctccacaagatatggccgcgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 145 atgaattccctttctccaatcacactccatgcccctttctccacaagatatggccgcgtt 204
Query: 61 tccgtcaaggcctccattgctgttgagcaacccactaagcttgctctcatcaaaattggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tccgtcaaggcctccattgctgttgagcaacccactaagcttgctctcatcaaaattggt 264
Query: 121 accagaggaagtccactagctctagctcaggcttatgagaccagagacaaactcattgca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 accagaggaagtccactagctctagctcaggcttatgagaccagagacaaactcattgca 324
Query: 181 tcacactcagagctagcggaagaaggggctattcagattgtgataattaaaacaacaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcacactcagagctagcggaagaaggggctattcagattgtgataattaaaacaacaggt 384
Query: 241 gacaaaatactctcgcaaccgcttgcagatattggcgggaagggcttgttcaccaaagaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gacaaaatactctcgcaaccgcttgcagatattggcgggaagggcttgttcaccaaagaa 444
Query: 301 atagatgaggcgctcttaaacggtgaaattgacattgctgtccattccatgaaggacgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atagatgaggcgctcttaaacggtgaaattgacattgctgtccattccatgaaggacgtt 504
Query: 361 cctacttacttacctgataaaacaattctaccgtgcaaccttccgcgtgaggatgttaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 cctacttacttacctgataaaacaattctaccgtgcaaccttccgcgtgaggatgttaga 564
Query: 421 gatgcatttatatccttgagtgcagcttcgctagctgatcttcccgctggaagtgtcatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gatgcatttatatccttgagtgcagcttcgctagctgatcttcccgctggaagtgtcatt 624
Query: 481 ggtactgcttcactaagacggaagtctcagatactccacagatatccatctctaaatgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ggtactgcttcactaagacggaagtctcagatactccacagatatccatctctaaatgtg 684
Query: 541 caagataatttccggggcaatgtccaaaccaggttgaaaaaactcaatgagggagttgtc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 caagataatttccggggcaatgtccaaaccaggttgaaaaaactcaatgagggagttgtc 744
Query: 601 aaagctacactattggcattagccggactcaaacggttaaatatgacagaaaatgttact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaagctacactattggcattagccggactcaaacggttaaatatgacagaaaatgttact 804
Query: 661 tcaaccctctcgattgaagaaaagcttccagctgtggcccaaggcgcgattggaatagca 720
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 805 tcaaccctctcgattgaagaaatgcttccagctgtggcccaaggcgcgattggaatagca 864
Query: 721 tgtagaagtgatgatgataaaatggcagaatacattgcatcattgaaccatgaagaaaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 tgtagaagtgatgatgataaaatggcagaatacattgcatcattgaaccatgaagaaaca 924
Query: 781 aggctggctgtggtatgtgaaagggcctttcttctgactttggatgggtcttgccgcacc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 925 aggctggctgtggtatgtgaaagggcctttcttctgactttggatgggtcttgccgcacc 984
Query: 841 cctattgcaggctatgcttccagaaacgaagacggaaattgcttatttagaggattggtt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 985 cctattgcaggctatgcttccagaaacgaagacggaaattgcttatttagaggattggtt 1044
Query: 901 gcttccccggatggaactcgtgtgctggagacatctagggttggtccatatgctgttgaa 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 gcttccccggatggaactcgtgtgctggagacatctagggttggtccatatgctgttgaa 1104
Query: 961 gatatgattgagatgggtaaggatgctggcaaggagcttctttctcgagctggacctaac 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1105 gatatgattgagatgggtaaggatgctggcaaggagcttctttctcgagctggacctaac 1164
Query: 1021 tttttcagtagttagcaa 1038
||||||||||||||||||
Sbjct: 1165 tttttcagtagttagcaa 1182
>gnl|LJGI|TC72216 similar to UniRef100_Q43082 Cluster: Porphobilinogen deaminase,
chloroplast precursor; n=1; Pisum sativum|Rep:
Porphobilinogen deaminase, chloroplast precursor - Pisum
sativum (Garden pea), partial (84%)
Length = 1478
Score = 948 bits (478), Expect = 0.0
Identities = 823/938 (87%)
Strand = Plus / Plus
Query: 101 ttgctctcatcaaaattggtaccagaggaagtccactagctctagctcaggcttatgaga 160
||||||| ||||||||||||||||||| |||| | ||||||||||||||||||||||||
Sbjct: 230 ttgctctgctcaaaattggtaccagagggagtctattagctctagctcaggcttatgaga 289
Query: 161 ccagagacaaactcattgcatcacactcagagctagcggaagaaggggctattcagattg 220
| ||| |||||||||| | ||||||| ||||| || ||||| ||||||||||||||||
Sbjct: 290 ctagaaacaaactcatgtcggcacactcggagcttgctgaagatggggctattcagattg 349
Query: 221 tgataattaaaacaacaggtgacaaaatactctcgcaaccgcttgcagatattggcggga 280
| ||||| |||||||||||||||| || | |||| || |||||||| |||||||| |
Sbjct: 350 tcataataaaaacaacaggtgacaggatccgaacgcagccacttgcagacattggcggca 409
Query: 281 agggcttgttcaccaaagaaatagatgaggcgctcttaaacggtgaaattgacattgctg 340
| ||||| || |||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 410 aaggcttatttaccaaagaaatagatgaggccctcttaaacggtcaaattgacattgctg 469
Query: 341 tccattccatgaaggacgttcctacttacttacctgataaaacaattctaccgtgcaacc 400
||||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||||||
Sbjct: 470 tccattctatgaaggatgttcctacttatttacctgataaaacaattctaccatgcaacc 529
Query: 401 ttccgcgtgaggatgttagagatgcatttatatccttgagtgcagcttcgctagctgatc 460
||||||| |||||||| |||||||||||||||||||| | |||| ||||||| ||| |||
Sbjct: 530 ttccgcgcgaggatgtaagagatgcatttatatccttcactgcaccttcgcttgctcatc 589
Query: 461 ttcccgctggaagtgtcattggtactgcttcactaagacggaagtctcagatactccaca 520
|||| ||||||| | |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 590 ttcctcatggaagtcttgttggtactgcttcactaagacgaaagtctcagatactccaca 649
Query: 521 gatatccatctctaaatgtgcaagataatttccggggcaatgtccaaaccaggttgaaaa 580
|| ||||| |||||||||| || || ||||| ||||||||| | || ||||||| ||
Sbjct: 650 aatgtccatacctaaatgtgctggaaaacttccgtggcaatgtcgatacaaggttgacaa 709
Query: 581 aactcaatgagggagttgtcaaagctacactattggcattagccggactcaaacggttaa 640
|||| || |||||||||||| |||||||| ||||||||||||| || || ||||| ||||
Sbjct: 710 aactgaacgagggagttgtccaagctacaatattggcattagctggtctaaaacgcttaa 769
Query: 641 atatgacagaaaatgttacttcaaccctctcgattgaagaaaagcttccagctgtggccc 700
|||||||||||||||| ||||| | |||||| |||||||| | ||| |||||||| ||||
Sbjct: 770 atatgacagaaaatgtgacttcgatcctctcaattgaagatatgctgccagctgttgccc 829
Query: 701 aaggcgcgattggaatagcatgtagaagtgatgatgataaaatggcagaatacattgcat 760
||||||||||||||||||||||||||||| |||| ||||||||| |||||||||||
Sbjct: 830 aaggcgcgattggaatagcatgtagaagtaatgaccataaaatggtggaatacattgctg 889
Query: 761 cattgaaccatgaagaaacaaggctggctgtggtatgtgaaagggcctttcttctgactt 820
|| |||| ||||||||||||||||| || ||||| ||||||||||| || |||| | ||
Sbjct: 890 cactgaatcatgaagaaacaaggctagcagtggtttgtgaaagggcattccttcatattt 949
Query: 821 tggatgggtcttgccgcacccctattgcaggctatgcttccagaaacgaagacggaaatt 880
|| |||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||
Sbjct: 950 tgaatgggtcttgccgcacccctattgcagggtatgcttccagaaatgaagacggagatt 1009
Query: 881 gcttatttagaggattggttgcttccccggatggaactcgtgtgctggagacatctaggg 940
|||| ||||||||||| ||| |||| || |||||||| | |||||||||||||||||||
Sbjct: 1010 gcttgtttagaggattagttacttctcctgatggaacctgcgtgctggagacatctaggg 1069
Query: 941 ttggtccatatgctgttgaagatatgattgagatgggtaaggatgctggcaaggagcttc 1000
|||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1070 ttggtccatacactgttgaagatatgattgagatgggtaaggatgctggcaaagagcttc 1129
Query: 1001 tttctcgagctggacctaactttttcagtagttagcaa 1038
|||||| |||||||||||||||||||| | |||||||
Sbjct: 1130 tttctcaggctggacctaactttttcagcatttagcaa 1167
>gnl|LJGI|DC594099 homologue to UniRef100_Q43082 Cluster: Porphobilinogen deaminase,
chloroplast precursor; n=1; Pisum sativum|Rep:
Porphobilinogen deaminase, chloroplast precursor - Pisum
sativum (Garden pea), partial (16%)
Length = 595
Score = 349 bits (176), Expect = 2e-95
Identities = 179/180 (99%)
Strand = Plus / Plus
Query: 538 gtgcaagataatttccggggcaatgtccaaaccaggttgaaaaaactcaatgagggagtt 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 gtgcaagataatttccggggcaatgtccaaaccaggttgaaaaaactcaatgagggagtt 475
Query: 598 gtcaaagctacactattggcattagccggactcaaacggttaaatatgacagaaaatgtt 657
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gtcaaagctacactattggcattagccggactcaaacggttaaatatgacagaaaatgtt 535
Query: 658 acttcaaccctctcgattgaagaaaagcttccagctgtggcccaaggcgcgattggaata 717
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 536 acttcaaccctctcgattgaagaaatgcttccagctgtggcccaaggcgcgattggaata 595
>gnl|LJGI|BW629120 similar to UniRef100_Q43082 Cluster: Porphobilinogen deaminase,
chloroplast precursor; n=1; Pisum sativum|Rep:
Porphobilinogen deaminase, chloroplast precursor - Pisum
sativum (Garden pea), partial (20%)
Length = 479
Score = 180 bits (91), Expect = 1e-44
Identities = 181/211 (85%)
Strand = Plus / Plus
Query: 101 ttgctctcatcaaaattggtaccagaggaagtccactagctctagctcaggcttatgaga 160
||||||| ||||||||||||||||||| |||| | ||||||||||||||||||||||||
Sbjct: 265 ttgctctgctcaaaattggtaccagagggagtctattagctctagctcaggcttatgaga 324
Query: 161 ccagagacaaactcattgcatcacactcagagctagcggaagaaggggctattcagattg 220
| ||| |||||||||| | ||||||| ||||| || ||||| ||||||||||||||||
Sbjct: 325 ctagaaacaaactcatgtcggcacactcggagcttgctgaagatggggctattcagattg 384
Query: 221 tgataattaaaacaacaggtgacaaaatactctcgcaaccgcttgcagatattggcggga 280
| ||||| |||||||||||||||| || | |||| || |||||||| |||||||| |
Sbjct: 385 tcataataaaaacaacaggtgacaggatccgaacgcagccacttgcagacattggcggca 444
Query: 281 agggcttgttcaccaaagaaatagatgaggc 311
| ||||| || ||||||||||||||||||||
Sbjct: 445 aaggcttatttaccaaagaaatagatgaggc 475
>gnl|LJGI|AV775945 UniRef100_Q43082 Cluster: Porphobilinogen deaminase chloroplast
precursor; n=1; Pisum sativum|Rep: Porphobilinogen,
partial (2%)
Length = 383
Score = 178 bits (90), Expect = 5e-44
Identities = 148/162 (91%), Gaps = 4/162 (2%)
Strand = Plus / Minus
Query: 880 tgcttatttagaggattggttgcttccccgga-tggaactcgtgtgctggagacatctag 938
||||||||||||||||||||||||||||| || ||| ||||||||||||||||||| |||
Sbjct: 383 tgcttatttagaggattggttgcttcccccgactgggactcgtgtgctggagacatttag 324
Query: 939 ggttggtcca-tatgctgttgaagatatgattgagatgggtaaggatgctgg-caaggag 996
|||||||||| ||| || |||||||||||||||||||||||||||||||||| | |||||
Sbjct: 323 ggttggtccactatccttttgaagatatgattgagatgggtaaggatgctggcccaggag 264
Query: 997 cttctttctcgagctggacctaactttttca-gtagttagca 1037
||||||| | ||||||||||| || |||||| ||||||||||
Sbjct: 263 cttcttttttgagctggacctgaccttttcacgtagttagca 222