Miyakogusa Predicted Gene
- Lj2g3v2089750.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2089750.2 tr|B9HP09|B9HP09_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1088048 PE=4
SV=1,85.69,0,BchD-ChlD: magnesium chelatase ATPase subunit D,Magnesium
chelatase, ATPase subunit D; von Willebran,CUFF.38559.2
(1425 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65114 homologue to UniRef100_O22437 Cluster: Magnesiu... 1489 0.0
gnl|LJGI|AV410166 homologue to UniRef100_O22437 Cluster: Magnesi... 579 e-164
gnl|LJGI|TC76334 UniRef100_O22437 Cluster: Magnesium-chelatase s... 274 1e-72
>gnl|LJGI|TC65114 homologue to UniRef100_O22437 Cluster: Magnesium-chelatase subunit
chlD, chloroplast precursor; n=1; Pisum sativum|Rep:
Magnesium-chelatase subunit chlD, chloroplast precursor -
Pisum sativum (Garden pea), partial (34%)
Length = 1003
Score = 1489 bits (751), Expect = 0.0
Identities = 772/780 (98%), Gaps = 8/780 (1%)
Strand = Plus / Plus
Query: 654 gggccctgtaaagagattagcagttgatgcaacccttagagctgccgcaccttatcaaaa 713
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 gggccctgtaaagagattagcagttgatgcaacccttagagctgccgcaccttatcaaaa 62
Query: 714 gttgcgaagggaaaaagacactgaaagccgtagaaaagtatatgttgagaaaactgacat 773
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 gttgcgaagggaaaaagacactgaaagccgtagaaaagtatatgttgagaaaactgacat 122
Query: 774 gagggcaaagagaatggcacgtaaagcaggagcattggtgatatttgtggttgatgcaag 833
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 gagggcaaagagaatggcacgtaaagcaggagcattggtgatatttgtggttgatgcaag 182
Query: 834 tggaagcatggctttaaacagaatgcaaaatgcaaaaggtgctgcacttaagcttcttgc 893
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 tggaagcatggctttaaacagaatgcaaaatgcaaaaggtgctgcacttaagcttcttgc 242
Query: 894 agaaagttacacaagcagggatcaggt--------atctataattcccttccgtggtgat 945
||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 243 agaaagttacacaagcagggatcaggtaagtaggtatctataattcccttccgtggtgat 302
Query: 946 tcggctgaagttctcctgccaccttctagatcaattgcgatggcaaggaaacgtcttgaa 1005
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tcggctgaagttctcctgccaccttctagatcaattgcgatggcaaggaaacgtcttgaa 362
Query: 1006 aggcttccatgtggaggagggtccccccttgctcatggacttaccaccgctgttagggtt 1065
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 aggcttccatgtggaggagggtccccccttgctcatggacttaccaccgctgttagggtt 422
Query: 1066 ggattaaatgcagagaaaagtggagatgttggacggataatgattgttgctatcaccgat 1125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 ggattaaatgcagagaaaagtggagatgttggacggataatgattgttgctatcaccgat 482
Query: 1126 ggcagagctaacatatcattgaaaagatcaaatgaccctgaagctgctgccgctgctgat 1185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 ggcagagctaacatatcattgaaaagatcaaatgaccctgaagctgctgccgctgctgat 542
Query: 1186 gccccaaaaccttcagcgaaagaattgaaggatgaaattcttgaagtggctgggaagata 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gccccaaaaccttcagcgaaagaattgaaggatgaaattcttgaagtggctgggaagata 602
Query: 1246 tataaagcaggaatgtccctccttgtcatcgacactgaaaacaagtttgtttcaacgggt 1305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 tataaagcaggaatgtccctccttgtcatcgacactgaaaacaagtttgtttcaacgggt 662
Query: 1306 ttcgccaaggagattgctagagttgcccaagggaagtactattatttgccaaatgcttca 1365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 ttcgccaaggagattgctagagttgcccaagggaagtactattatttgccaaatgcttca 722
Query: 1366 gatgctgttatctcatctgcaacaaaggaagctttatcagctttgaagaattcataaaac 1425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 gatgctgttatctcatctgcaacaaaggaagctttatcagctttgaagaattcataaaac 782
>gnl|LJGI|AV410166 homologue to UniRef100_O22437 Cluster: Magnesium-chelatase subunit
chlD, chloroplast precursor; n=1; Pisum sativum|Rep:
Magnesium-chelatase subunit chlD, chloroplast precursor
- Pisum sativum (Garden pea), partial (13%)
Length = 292
Score = 579 bits (292), Expect = e-164
Identities = 292/292 (100%)
Strand = Plus / Plus
Query: 93 tgacactgcaaaaactcagatcatcttgtctagagagtatctaaaggatgttactattag 152
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgacactgcaaaaactcagatcatcttgtctagagagtatctaaaggatgttactattag 60
Query: 153 cacagaacaattaaaatatctggttattgaagctttacgaggtggttgccagggacacag 212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cacagaacaattaaaatatctggttattgaagctttacgaggtggttgccagggacacag 120
Query: 213 agctgagctatatgctgcccgtgttgcaaaatgcttagctgctctggagggacgtgaaaa 272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agctgagctatatgctgcccgtgttgcaaaatgcttagctgctctggagggacgtgaaaa 180
Query: 273 ggtttttgtggatgacctaaaaaaggctgtagaattggtcattctcccccggtcaatcat 332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggtttttgtggatgacctaaaaaaggctgtagaattggtcattctcccccggtcaatcat 240
Query: 333 tactgagaaaccaccagagcaacaaaatcagccacctccacctccaccgcct 384
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tactgagaaaccaccagagcaacaaaatcagccacctccacctccaccgcct 292
>gnl|LJGI|TC76334 UniRef100_O22437 Cluster: Magnesium-chelatase subunit chlD,
chloroplast precursor; n=1; Pisum sativum|Rep:
Magnesium-chelatase subunit chlD, chloroplast precursor -
Pisum sativum (Garden pea), partial (6%)
Length = 524
Score = 274 bits (138), Expect = 1e-72
Identities = 138/138 (100%)
Strand = Plus / Plus
Query: 917 aggtatctataattcccttccgtggtgattcggctgaagttctcctgccaccttctagat 976
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aggtatctataattcccttccgtggtgattcggctgaagttctcctgccaccttctagat 407
Query: 977 caattgcgatggcaaggaaacgtcttgaaaggcttccatgtggaggagggtccccccttg 1036
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 caattgcgatggcaaggaaacgtcttgaaaggcttccatgtggaggagggtccccccttg 467
Query: 1037 ctcatggacttaccaccg 1054
||||||||||||||||||
Sbjct: 468 ctcatggacttaccaccg 485