Miyakogusa Predicted Gene
- Lj2g3v2089740.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2089740.1 tr|G7K9A5|G7K9A5_MEDTR GRAS family transcription
factor OS=Medicago truncatula GN=MTR_5g009080 PE=4 ,87.11,0,seg,NULL;
GRAS,Transcription factor GRAS; FAMILY NOT NAMED,NULL,CUFF.38557.1
(1426 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO038157 similar to UniRef100_A7PFX5 Cluster: Chromosom... 698 0.0
gnl|LJGI|TC77925 similar to UniRef100_A7PFX5 Cluster: Chromosome... 394 e-109
gnl|LJGI|TC70142 similar to UniRef100_A7PFX5 Cluster: Chromosome... 212 4e-54
gnl|LJGI|TC72033 similar to UniRef100_A7Q1V5 Cluster: Chromosome... 172 4e-42
gnl|LJGI|BP044387 weakly similar to UniRef100_A7Q1V5 Cluster: Ch... 137 2e-31
>gnl|LJGI|GO038157 similar to UniRef100_A7PFX5 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 416
Score = 698 bits (352), Expect = 0.0
Identities = 358/360 (99%)
Strand = Plus / Minus
Query: 1067 aggctctatattcttatgcagcattgtttgattgtttggaatccactgtctcaagaacat 1126
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aggctctatattcttacgcagcattgtttgattgtttggaatccactgtctcaagaacat 357
Query: 1127 cattggagagaataaaggtggagaagatgcttttcggtgaggaaatcaagaacattattg 1186
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 cgttggagagaataaaggtggagaagatgcttttcggtgaggaaatcaagaacattattg 297
Query: 1187 cttgtgagggagctgaaagaaaggaaagacatgaaaagctggataagtggctccagagac 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cttgtgagggagctgaaagaaaggaaagacatgaaaagctggataagtggctccagagac 237
Query: 1247 ttgatgtatctgggtttagcaacacgcctttaagctattatggcatgttgcaagcacgga 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ttgatgtatctgggtttagcaacacgcctttaagctattatggcatgttgcaagcacgga 177
Query: 1307 ggttccttcagagctatggttgtgaaggatataggatgagggaagaaaatggttctgtag 1366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ggttccttcagagctatggttgtgaaggatataggatgagggaagaaaatggttctgtag 117
Query: 1367 taatgtgctggcaggacaggtccttgttttcaacaacagcttggagacctaggaagtaag 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 taatgtgctggcaggacaggtccttgttttcaacaacagcttggagacctaggaagtaag 57
>gnl|LJGI|TC77925 similar to UniRef100_A7PFX5 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 747
Score = 394 bits (199), Expect = e-109
Identities = 377/431 (87%), Gaps = 4/431 (0%)
Strand = Plus / Plus
Query: 1000 aaggtcctggttgtaacagaacaagactctaatcataacggttccactctgatggagagg 1059
|||||| ||||||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 3 aaggtcatggttgtgacagaacaagactccaatcataatggttccactctgatggagagg 62
Query: 1060 ctactggaggctctatattcttatgcagcattgtttgattgtttggaatccactgtctca 1119
|| || || |||| |||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 63 ctgctagaatctctgtattcttatgcagcattgtttgattgtttggaatccactgtccca 122
Query: 1120 agaacatcattggagagaataaaggtggagaagatgcttttcggtgaggaaatcaagaac 1179
||||| || |||||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 123 agaacctccttggagagaataaaggtggagaagatgcattttggtgaggaaatcaagaac 182
Query: 1180 attattgcttgtgagggagctgaaagaaaggaaagacatgaaaagctggataagtggctc 1239
|| ||||| ||||||||| |||||||||||| | |||||||||||||| || ||| ||
Sbjct: 183 atcattgcgtgtgagggatttgaaagaaaggaggggcatgaaaagctggaaaaatggttc 242
Query: 1240 cagagacttgatgtatctgggtttagcaacacgcctttaagctattatggcatgttg-ca 1298
|||||| ||||| | |||||||| | || |||||||||||||| ||| |||||| ||
Sbjct: 243 cagagatttgattcagctgggtttggtaatgtgcctttaagctattttgggatgttgaca 302
Query: 1299 agcacggaggttcctt-cagagctatggttgtgaaggatataggatgagggaagaaaatg 1357
|||||||||| ||| ||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 303 gccacggaggttacttccagagctatggttgtgagggatatagaatgagggaagaaaatg 362
Query: 1358 gttctgtagtaatgtgctggcaggac-aggtc-cttgttttcaacaacagcttggagacc 1415
||| ||||| || |||||||||||| |||| ||||||||| | | ||||||||||| |
Sbjct: 363 gttgtgtagccatttgctggcaggactcggtcacttgttttccatatcagcttggagatc 422
Query: 1416 taggaagtaag 1426
|| ||||||||
Sbjct: 423 tatgaagtaag 433
>gnl|LJGI|TC70142 similar to UniRef100_A7PFX5 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 815
Score = 212 bits (107), Expect = 4e-54
Identities = 187/213 (87%), Gaps = 3/213 (1%)
Strand = Plus / Plus
Query: 60 cttctccatgatgtcactttcacctagca---taggatctccttacccttggcttagaga 116
||||||||||||||||||||| |||| | ||||||| || |||| |||||||||||
Sbjct: 590 cttctccatgatgtcactttctcctacaaccttaggatccccaaacccctggcttagaga 649
Query: 117 attgaaatctgaggaaaggggtttgtacttgatccatttgttgctcacttgtgcaaacca 176
|||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 650 gctgaaatctgaggaaaggggtttgtacttaatccatttgttgctaacttgtgcaaacca 709
Query: 177 tgtagctgctggtagtcttgagaatgcaaacatcacacttgagcaaatctcccagcttgc 236
||| ||||||||||||||||| |||||||||| |||||||||||| || ||| ||||||
Sbjct: 710 tgttgctgctggtagtcttgaaaatgcaaacaccacacttgagcagatttccatgcttgc 769
Query: 237 ctccccggatggcgataccatgcagcgaatcgc 269
||||| ||||| || || ||||||||||||||
Sbjct: 770 ttcccctgatggggacactatgcagcgaatcgc 802
>gnl|LJGI|TC72033 similar to UniRef100_A7Q1V5 Cluster: Chromosome chr13 scaffold_45,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_45, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 1074
Score = 172 bits (87), Expect = 4e-42
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 1272 gcctttaagctattatggcatgttgcaagcacggaggttccttcagagctatggttgtga 1331
|||||||||||||| ||| |||||||||||| ||||||| ||||| ||||||||||||||
Sbjct: 21 gcctttaagctattttgggatgttgcaagcaaggaggttacttcaaagctatggttgtga 80
Query: 1332 aggatataggatgagggaagaaaatggttctgtagtaatgtgctggcaggacaggtcctt 1391
|||||||| ||||||||||||||||||| ||||| ||| ||||||||||| |||| ||
Sbjct: 81 gggatatagaatgagggaagaaaatggttgtgtagcaatttgctggcaggatcggtcatt 140
Query: 1392 gttttcaacaacagcttggagacctaggaagtaag 1426
|||||||| | ||||||||||| ||| ||||||||
Sbjct: 141 gttttcaatatcagcttggagatctatgaagtaag 175
>gnl|LJGI|BP044387 weakly similar to UniRef100_A7Q1V5 Cluster: Chromosome chr13
scaffold_45, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr13 scaffold_45, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (18%)
Length = 378
Score = 137 bits (69), Expect = 2e-31
Identities = 216/265 (81%)
Strand = Plus / Minus
Query: 1162 ggtgaggaaatcaagaacattattgcttgtgagggagctgaaagaaaggaaagacatgaa 1221
|||||||||||| ||||||| |||| ||||||||| |||||||||||| || | ||||
Sbjct: 356 ggtgaggaaatccagaacatccttgcgtgtgagggatttgaaagaaaggagaggcctgaa 297
Query: 1222 aagctggataagtggctccagagacttgatgtatctgggtttagcaacacgcctttaagc 1281
||||||| || ||| ||| |||| ||||| | |||||||| | || ||| ||||||
Sbjct: 296 aagctgggaaaatgggtcccgagatttgattcaactgggtttggtaaagtgcccttaagc 237
Query: 1282 tattatggcatgttgcaagcacggaggttccttcagagctatggttgtgaaggatatagg 1341
|||| ||| |||||| || | ||||||| |||| |||||||||||||| ||||||||
Sbjct: 236 tattttgggatgttgaaaaccaggaggttacttccaagctatggttgtgagggatataga 177
Query: 1342 atgagggaagaaaatggttctgtagtaatgtgctggcaggacaggtccttgttttcaaca 1401
||||||| ||||||||||| ||||| | ||||||| ||| ||||||||||||| | |
Sbjct: 176 atgaggggagaaaatggttgtgtagccaattgctggccggatcggtccttgttttccata 117
Query: 1402 acagcttggagacctaggaagtaag 1426
||||||||||| ||| ||||||||
Sbjct: 116 tcagcttggagatctatgaagtaag 92