Miyakogusa Predicted Gene
- Lj2g3v2088270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2088270.1 tr|Q1ECR6|Q1ECR6_ARATH At4g23900 OS=Arabidopsis
thaliana PE=2 SV=1,71.77,0,NUCLEOSIDE DIPHOSPHATE KINASE,Nucleoside
diphosphate kinase; NUCDPKINASE,Nucleoside diphosphate
kina,gene.g42927.t1.1
(621 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57381 similar to UniRef100_Q8LAH8 Cluster: Nucleoside... 805 0.0
gnl|LJGI|TC66373 similar to UniRef100_Q9SP13 Cluster: Nucleoside... 400 e-111
gnl|LJGI|GO020381 homologue to UniRef100_A5BVN4 Cluster: Nucleos... 234 5e-61
>gnl|LJGI|TC57381 similar to UniRef100_Q8LAH8 Cluster: Nucleoside diphosphate kinase
IV, chloroplast/mitochondrial precursor; n=2;
Arabidopsis thaliana|Rep: Nucleoside diphosphate kinase
IV, chloroplast/mitochondrial precursor - Arabidopsis
thaliana (Mouse-ear cress), partial (95%)
Length = 976
Score = 805 bits (406), Expect = 0.0
Identities = 406/406 (100%)
Strand = Plus / Plus
Query: 216 gatttcagagattatatctcgttttgagcggaaaggatacaagcttgtgggaattaaagt 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gatttcagagattatatctcgttttgagcggaaaggatacaagcttgtgggaattaaagt 441
Query: 276 attagttccttcaaaggaattcgcccagagacattaccatgacctgaaggagagaccctt 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 attagttccttcaaaggaattcgcccagagacattaccatgacctgaaggagagaccctt 501
Query: 336 cttcaatgagctatgtgaattccttagctctggccctgttgttgcaatggtctgggaagg 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 cttcaatgagctatgtgaattccttagctctggccctgttgttgcaatggtctgggaagg 561
Query: 396 acagggagcaatatcatatggccgaaagctaattggggccacagatccccagaagtcaga 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 acagggagcaatatcatatggccgaaagctaattggggccacagatccccagaagtcaga 621
Query: 456 acctggaactattagaggcgatctggctgtcatcgttggaagaaatatcatccatgggag 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 acctggaactattagaggcgatctggctgtcatcgttggaagaaatatcatccatgggag 681
Query: 516 tgatggtccagagactgccaaggatgaagtcaacttgtggtttaagccagaagagttggt 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tgatggtccagagactgccaaggatgaagtcaacttgtggtttaagccagaagagttggt 741
Query: 576 taatttcactagcaatgcagagaagtgggtctatggttccaactga 621
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 taatttcactagcaatgcagagaagtgggtctatggttccaactga 787
Score = 351 bits (177), Expect = 3e-96
Identities = 177/177 (100%)
Strand = Plus / Plus
Query: 40 gaagggcgtgcggtaggtgctgcttctgcagttttgttcaccaataaagcgcctcttctg 99
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 gaagggcgtgcggtaggtgctgcttctgcagttttgttcaccaataaagcgcctcttctg 214
Query: 100 gcttccagttacagaagggctggttctcaaagtggacccggagcatggatttcaggagct 159
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 gcttccagttacagaagggctggttctcaaagtggacccggagcatggatttcaggagct 274
Query: 160 cttgctcttcctgctgcagctttccttctccaagatcaggaggtgcacgctgctgag 216
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cttgctcttcctgctgcagctttccttctccaagatcaggaggtgcacgctgctgag 331
>gnl|LJGI|TC66373 similar to UniRef100_Q9SP13 Cluster: Nucleoside diphosphate kinase;
n=1; Pisum sativum|Rep: Nucleoside diphosphate kinase -
Pisum sativum (Garden pea), partial (96%)
Length = 1044
Score = 400 bits (202), Expect = e-111
Identities = 355/406 (87%)
Strand = Plus / Plus
Query: 216 gatttcagagattatatctcgttttgagcggaaaggatacaagcttgtgggaattaaagt 275
|||||| |||||||| |||||||||||| ||||||| | ||||||||| |||||||||||
Sbjct: 404 gatttctgagattatttctcgttttgagaggaaagggttcaagcttgttggaattaaagt 463
Query: 276 attagttccttcaaaggaattcgcccagagacattaccatgacctgaaggagagaccctt 335
||| |||||||||||||||| ||||| | ||||| || |||||||| || ||||| ||
Sbjct: 464 attgattccttcaaaggaatttgcccaaaagcattatcacgacctgaaagaaagaccatt 523
Query: 336 cttcaatgagctatgtgaattccttagctctggccctgttgttgcaatggtctgggaagg 395
|||||||| ||| ||||||||||| ||||||||||||||| |||||||||| ||||||||
Sbjct: 524 cttcaatgggctgtgtgaattcctaagctctggccctgttattgcaatggtgtgggaagg 583
Query: 396 acagggagcaatatcatatggccgaaagctaattggggccacagatccccagaagtcaga 455
| |||||| || | ||||||||||| |||||||| || |||||||| ||||| ||| |
Sbjct: 584 agagggagttatcacctatggccgaaaactaattggagcgacagatcctcagaaatcaca 643
Query: 456 acctggaactattagaggcgatctggctgtcatcgttggaagaaatatcatccatgggag 515
||||||||| ||||| || ||||| ||||| | ||||||||||||||||||||||||||
Sbjct: 644 acctggaaccattaggggtgatctagctgttgttgttggaagaaatatcatccatgggag 703
Query: 516 tgatggtccagagactgccaaggatgaagtcaacttgtggtttaagccagaagagttggt 575
|||||||| ||||||||||||||||| | || ||||||||||||||||| ||||||||
Sbjct: 704 cgatggtccggagactgccaaggatgagattaagttgtggtttaagccagaggagttggt 763
Query: 576 taatttcactagcaatgcagagaagtgggtctatggttccaactga 621
|||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 764 taatttcactagcaatgcagagaagtgggtttatggtgtcaactga 809
Score = 99.6 bits (50), Expect = 2e-20
Identities = 68/74 (91%)
Strand = Plus / Plus
Query: 143 catggatttcaggagctcttgctcttcctgctgcagctttccttctccaagatcaggagg 202
||||| ||||||||||||||||||||||||||||||||| | | || |||||||||||||
Sbjct: 280 catgggtttcaggagctcttgctcttcctgctgcagcttacatgcttcaagatcaggagg 339
Query: 203 tgcacgctgctgag 216
|||| |||||||||
Sbjct: 340 tgcatgctgctgag 353
>gnl|LJGI|GO020381 homologue to UniRef100_A5BVN4 Cluster: Nucleoside diphosphate
kinase; n=1; Vitis vinifera|Rep: Nucleoside diphosphate
kinase - Vitis vinifera (Grape), partial (31%)
Length = 477
Score = 234 bits (118), Expect = 5e-61
Identities = 187/210 (89%)
Strand = Plus / Plus
Query: 412 tatggccgaaagctaattggggccacagatccccagaagtcagaacctggaactattaga 471
||||||||||| |||||||| || |||||||| ||||| ||| |||||||||| |||||
Sbjct: 73 tatggccgaaaactaattggagcgacagatcctcagaaatcacaacctggaaccattagg 132
Query: 472 ggcgatctggctgtcatcgttggaagaaatatcatccatgggagtgatggtccagagact 531
|| ||||| ||||| | |||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 133 ggtgatctagctgttgttgttggaagaaatatcatccatgggagcgatggtccggagact 192
Query: 532 gccaaggatgaagtcaacttgtggtttaagccagaagagttggttaatttcactagcaat 591
||||||||||| | || ||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 193 gccaaggatgagattaagttgtggtttaagccagaggagttggttaatttcactagcaat 252
Query: 592 gcagagaagtgggtctatggttccaactga 621
|||||||||||||| |||||| |||||||
Sbjct: 253 gcagagaagtgggtttatggtgtcaactga 282