Miyakogusa Predicted Gene
- Lj2g3v2088070.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2088070.1 Non Chatacterized Hit- tr|I3S704|I3S704_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,100,0,WD40
repeat-like,WD40-repeat-containing domain; WD40,WD40 repeat; no
description,WD40/YVTN repeat-li,CUFF.38545.1
(1410 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58856 similar to UniRef100_A7QNA0 Cluster: Chromosome... 2748 0.0
gnl|LJGI|BW623310 similar to UniRef100_A7QNA0 Cluster: Chromosom... 791 0.0
gnl|LJGI|TC68258 weakly similar to UniRef100_A7NWE7 Cluster: Chr... 74 3e-12
>gnl|LJGI|TC58856 similar to UniRef100_A7QNA0 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 1456
Score = 2748 bits (1386), Expect = 0.0
Identities = 1405/1410 (99%), Gaps = 1/1410 (0%)
Strand = Plus / Plus
Query: 1 atggcgaaggaggtgttgacacttgacaatggcacaacttgctcatcctggaactactcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 48 atggcgaaggaggtgttgacacttgacaatggcacaacttgctcatcctggaactactcc 107
Query: 61 ggtacaagactcgctgctggttccgccgatggcaccctctcgatcttcgattcccgcgac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 108 ggtacaagactcgctgctggttccgccgatggcaccctctcgatcttcgattcccgcgac 167
Query: 121 cctccttcttcctcctctctccgcctctctttcaaatccaaggttcatgaaggaaacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 168 cctccttcttcctcctctctccgcctctctttcaaatccaaggttcatgaaggaaacatt 227
Query: 181 gtgaacattgtttgggttccgccagcgtacggggatgcagttgcatgtatttctgttgat 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 gtgaagattgtttgggttccgccagcgtacggggatgcagttgcatgtatttctgttgat 287
Query: 241 ggaattgtgtcattgctggaggaggtggtagaagattcacagcctcttcagtggaagatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ggaattgtgtcattgctggaggaggtggtagaagattcacagcctcttcagtggaagatt 347
Query: 301 tgtaaatgctttggaagcagttcagacaaagttcttgatgttcaatttggaatctctttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 tgtaaatgctttggaagcagttcagacaaagttcttgatgttcaatttggaatctctttg 407
Query: 361 gccagtttgaaaatggtggctgcatattctgatggtcatatgaaagttttcgagctcctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gccagtttgaaaatggtggctgcatattctgatggtcatatgaaagttttcgagctcctg 467
Query: 421 gatccgttggaactgaaaaactggcaacttcaggctgagtttcaaaatgttattgagtca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gatccgttggaactgaaaaactggcaacttcaggctgagtttcaaaatgttattgagtca 527
Query: 481 gtttcttcatttggaaaggctgtgtgcctttctgcatccatatctttcaatccacaaaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 gtttcttcatttggaaaggctgtgtgcctttctgcatccatatctttcaatccacaaaat 587
Query: 541 ggtggaagccaggaatccagcttcctagttggttttaattcaaacacatcagagcttaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 ggtggaagccaggaatccagcttcctagttggttttaattcaaacacatcagagcttaat 647
Query: 601 tctgctaaggtgtgggaatttgatcaggctcatcaaagatggcttccagtggcagaattg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 tctgctaaggtgtgggaatttgatcaggctcatcaaagatggcttccagtggcagaattg 707
Query: 661 gcagtgcctgaggacaagggtgatcaggtgtacgccgtcgcatgggcaccaaatattggc 720
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 708 gcagtggctgaggacaagggtgatcaggtgtacgccgtcgcatgggcaccaaatattggc 767
Query: 721 aggacgtatgagatcattgcggttgcaacgcacaagggacttgcaatatggcaccttgga 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 aggacgtatgagatcattgcggttgcaacgcacaagggacttgcaatatggcaccttgga 827
Query: 781 ttgaaccctgatcatgacggtagactaccagtggagagagttgcagtgctgtcgggtcat 840
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 828 ttgaaccctgatcatgacggtagactacccgtggagagagttgcagtgctgtcgggtcat 887
Query: 841 gatggcatggtgtggcaaatggagtgggatatgagcggaatgacgttggctactacaggt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 gatggcatggtgtggcaaatggagtgggatatgagcggaatgacgttggctactacaggt 947
Query: 901 caagatggaatggtcagattatggcagtctaatctcaacggtgtttggcatcagcaggct 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 948 caagatggaatggtcagattatggcagtctaatctcaacggtgtttggcatcagcaggct 1007
Query: 961 gcatttgaacccacttcttagccactcgactcctgttatatgcatactttttgttcaata 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1008 gcatttgaacccacttcttagccactcgactcctgttatatgcatactttttgttcaata 1067
Query: 1021 tgaaccacttaatgtttatggctccggagataagtttaaatgatctcaatttgccctttc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1068 tgaaccacttaatgtttatggctccggagataagtttaaatgatctcaatttgccctttc 1127
Query: 1081 agtgatattttgtatctaaacctcaatcagtttgttgtaacttgtaagtagtaagctggc 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1128 agtgatattttgtatctaaacctcaatcagtttgttgtaacttgtaagtagtaagctggc 1187
Query: 1141 gcggcttttctcctttttcacctcattagtaatttttgaataggattaacatcatgttta 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1188 gcggcttttctcctttttcacctcattagtaatttttgaataggattaacatcatgttta 1247
Query: 1201 gatgtgtgttgggtacacactccaaagcacgttagcggagaagctccatattatagctta 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1248 gatgtgtgttgggtacacactccaaagcacgttagcggagaagctccatattatagctta 1307
Query: 1261 tgtattaacgtgattaagaggtctaacatggattctaaacctgtgcactatgggtacttt 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1308 tgtattaacgtgattaagaggtctaacatggattctaaacctgtgcactatgggtacttt 1367
Query: 1321 gttgaaagtcatgatcctcatgttacatgatgcagatatcattcatttactctcaccttt 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1368 gttgaaagtcatgatcctcatgttacatgatgcagatatcattcatttactctcaccttt 1427
Query: 1381 gccgttgtacaatcaatacttttactttct 1410
|||||||||| ||| |||||||||||||||
Sbjct: 1428 gccgttgtacgatc-atacttttactttct 1456
>gnl|LJGI|BW623310 similar to UniRef100_A7QNA0 Cluster: Chromosome chr2 scaffold_132,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_132, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 484
Score = 791 bits (399), Expect = 0.0
Identities = 408/411 (99%)
Strand = Plus / Plus
Query: 1 atggcgaaggaggtgttgacacttgacaatggcacaacttgctcatcctggaactactcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atggcgaaggaggtgttgacacttgacaatggcacaacttgctcatcctggaactactcc 133
Query: 61 ggtacaagactcgctgctggttccgccgatggcaccctctcgatcttcgattcccgcgac 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ggtacaagactcgctgctggttccgccgatggcaccctctcgatcttcgattcccgcgaa 193
Query: 121 cctccttcttcctcctctctccgcctctctttcaaatccaaggttcatgaaggaaacatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 cctccttcttcctcctctctccgcctctctttcaaatccaaggttcatgaaggaaacatt 253
Query: 181 gtgaacattgtttgggttccgccagcgtacggggatgcagttgcatgtatttctgttgat 240
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gtgaagattgtttgggttccgccagcgtacggggatgcagttgcatgtatttctgttgat 313
Query: 241 ggaattgtgtcattgctggaggaggtggtagaagattcacagcctcttcagtggaagatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ggaattgtgtcattgctggaggaggtggtagaagattcacagcctcttcagtggaagatt 373
Query: 301 tgtaaatgctttggaagcagttcagacaaagttcttgatgttcaatttggaatctctttg 360
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 374 tgtaaatgctttggaagcagttcggacaaagttcttgatgttcaatttggaatctctttg 433
Query: 361 gccagtttgaaaatggtggctgcatattctgatggtcatatgaaagttttc 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gccagtttgaaaatggtggctgcatattctgatggtcatatgaaagttttc 484
>gnl|LJGI|TC68258 weakly similar to UniRef100_A7NWE7 Cluster: Chromosome chr5
scaffold_2, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_2, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 683
Score = 73.8 bits (37), Expect = 3e-12
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 1187 taacatcatgtttagatgtgtgttgggtacacactccaaagcacgttagcggagaagctc 1246
||||| ||||||| |||||||||||| |||||||||||| ||||||||| |||||||||
Sbjct: 586 taacagcatgtttggatgtgtgttggacacacactccaaaacacgttagcagagaagctc 527
Query: 1247 c 1247
|
Sbjct: 526 c 526