Miyakogusa Predicted Gene

Lj2g3v2088010.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2088010.1 Non Chatacterized Hit- tr|I1LGA2|I1LGA2_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.21351 PE,72.38,0,WD40
repeats,WD40 repeat; coiled-coil,NULL; UBIQUITIN LIGASE PROTEIN COP1
(CONSTITUTIVE PHOTOMORPHOG,CUFF.38526.1
         (3228 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73999 similar to UniRef100_A7P1N6 Cluster: Chromosome...    66   1e-09

>gnl|LJGI|TC73999 similar to UniRef100_A7P1N6 Cluster: Chromosome chr19 scaffold_4,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr19 scaffold_4, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (23%)
          Length = 886

 Score = 65.9 bits (33), Expect = 1e-09
 Identities = 57/65 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2974 aagaactttgtgggcttatcagtatctgatggatatattgcatgtggttcagaaacaaat 3033
            ||||||||||| || ||||||||||||||||| |||||| |   ||||||||| ||||||
Sbjct: 366  aagaactttgttggattatcagtatctgatggttatattactactggttcagagacaaat 425

                 
Query: 3034 gaggt 3038
            |||||
Sbjct: 426  gaggt 430