Miyakogusa Predicted Gene

Lj2g3v2087970.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2087970.3 tr|D5P342|D5P342_9MYCO Acyl-CoA synthetase
OS=Mycobacterium parascrofulaceum ATCC BAA-614 GN=HMPREF0,33.65,0.14,
,CUFF.38532.3
         (480 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67281 similar to UniRef100_A1A5R6 Cluster: LOC681092 ...   240   7e-63

>gnl|LJGI|TC67281 similar to UniRef100_A1A5R6 Cluster: LOC681092 protein; n=1; Rattus
           norvegicus|Rep: LOC681092 protein - Rattus norvegicus
           (Rat), partial (4%)
          Length = 771

 Score =  240 bits (121), Expect = 7e-63
 Identities = 134/137 (97%), Gaps = 1/137 (0%)
 Strand = Plus / Plus

                                                                       
Query: 345 agaaatggtaatggaaggttttc-aagaagtctgtcaagcgcaccatatcaatggaattg 403
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||
Sbjct: 1   agaaatggtaatggaaggttttccaagaagtctgtcaagcgcaccatatcaatggaactg 60

                                                                       
Query: 404 ttagggtgcactacacctacattaatggtagccaattcaacattcggattttctatgatg 463
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 61  ttagggtgcactacacctacattaatggtagccgattcaacattcggattttctatgatg 120

                            
Query: 464 agtacacgaggtagctt 480
           |||||||||||||||||
Sbjct: 121 agtacacgaggtagctt 137