Miyakogusa Predicted Gene
- Lj2g3v2087800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2087800.1 tr|I0YYM0|I0YYM0_9CHLO Phosphoenolpyruvate
carboxylase OS=Coccomyxa subellipsoidea C-169 GN=ppc PE=3,29.89,5.8,
,BP046488.path1.1
(370 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BP046488 similar to UniRef100_Q6TBQ3 Cluster: Glycinami... 698 0.0
gnl|LJGI|TC78723 161 4e-39
gnl|LJGI|BP036275 84 7e-16
>gnl|LJGI|BP046488 similar to UniRef100_Q6TBQ3 Cluster: Glycinamide ribonucleotide
transformylase; n=1; Solanum tuberosum|Rep: Glycinamide,
partial (4%)
Length = 512
Score = 698 bits (352), Expect = 0.0
Identities = 366/368 (99%), Gaps = 2/368 (0%)
Strand = Plus / Plus
Query: 1 atgccacaacccctaaatttgaatgggtataaaggtcttatatttcagaccaaatttgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 atgccacaacccctaaatttgaatgggtataaaggtcttatatttcagaccaaatttgaa 194
Query: 61 ttgagtatacatcagctttccataaagtgtggatcatccacccaaacctctgaagagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 ttgagtatacatcagctttccataaagtgtggatcatccacccaaacctctgaagagcat 254
Query: 121 cagaactggcctttcctcaactctaccaacctcatctcatcagaattgagtaagcaacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 cagaactggcctttcctcaactctaccaacctcatctcatcagaattgagtaagcaacat 314
Query: 181 tttgagctttccataatgtgtctgaatcatccacccagacttgtaaa-taagatagaaat 239
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 315 tttgagctttccataatgtgtctgaatcatccacccagacttgtaaattaagatagaaat 374
Query: 240 g-tccttcgtctctggaattgagtgtgaatatactttttcagctttccatattgtgctca 298
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 gttccttcgtctctggaattgagtgtgaatatactttttcagctttccatattgtgctca 434
Query: 299 aagttacccaaactaaagtaaagtgtcagaatgaccttttccccactgttacatcctcgt 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 aagttacccaaactaaagtaaagtgtcagaatgaccttttccccactgttacatcctcgt 494
Query: 359 ctgagaat 366
||||||||
Sbjct: 495 ctgagaat 502
>gnl|LJGI|TC78723
Length = 421
Score = 161 bits (81), Expect = 4e-39
Identities = 139/157 (88%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 33 aggtcttatatttcagaccaaatttgaattgagtatacatcagctttccataaagtgtgg 92
||||||||||||||| || |||||||||| | ||||||||||||||||||| || ||
Sbjct: 237 aggtcttatatttcaaactaaatttgaat-gcccatacatcagctttccataaggttggg 179
Query: 93 atcatccacccaaacctctgaagagcatcagaactggcctttcctcaactctaccaacct 152
||||||||| ||||| ||||||||| || ||||||| ||||| |||||||||||||||||
Sbjct: 178 atcatccacacaaacttctgaagagtataagaactgtccttttctcaactctaccaacct 119
Query: 153 catctcatcagaattgagtaagcaacattttgagctt 189
|||||| ||||||||||||| ||||||| ||||||||
Sbjct: 118 catctcttcagaattgagtatgcaacatgttgagctt 82
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Minus
Query: 243 cttcgtctctggaattgagtgtgaatatactttttcagctttccatattgtgct 296
||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct: 84 cttcgtctctggaatagagtgtgaatatactttttcagctttccatatagtgct 31
>gnl|LJGI|BP036275
Length = 445
Score = 83.8 bits (42), Expect = 7e-16
Identities = 120/145 (82%), Gaps = 1/145 (0%)
Strand = Plus / Plus
Query: 33 aggtcttatatttcagaccaaatttgaattgagtatacatcagctttccataaagtgtgg 92
||||||||||||||| || |||||||||| | ||||||||||||||||||| | ||
Sbjct: 271 aggtcttatatttcaaactaaatttgaatggcc-atacatcagctttccataanggtggg 329
Query: 93 atcatccacccaaacctctgaagagcatcagaactggcctttcctcaactctaccaacct 152
||||||||| ||||| ||||||||| || |||| || |||| ||||| ||| ||| ||
Sbjct: 330 atcatccacacaaacttctgaagagtataagaaatgtgcttttctcaaatcttacaaact 389
Query: 153 catctcatcagaattgagtaagcaa 177
|||||| || |||||||||| ||||
Sbjct: 390 catctcttccgaattgagtatgcaa 414