Miyakogusa Predicted Gene
- Lj2g3v2083350.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2083350.1 Non Chatacterized Hit- tr|I1K6C9|I1K6C9_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,84.94,0,AAA-FAMILY
ATPASE,NULL; AAA ATPASE,NULL; seg,NULL; AAA,ATPase, AAA-type,
conserved site; P-loop cont,CUFF.38486.1
(939 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71712 homologue to UniRef100_A7QNG1 Cluster: Chromoso... 244 8e-64
gnl|LJGI|AV418768 homologue to UniRef100_A7PHF9 Cluster: Chromos... 70 3e-11
gnl|LJGI|TC67445 similar to UniRef100_A7Q0A4 Cluster: Chromosome... 64 2e-09
gnl|LJGI|TC81802 similar to UniRef100_A7P2W5 Cluster: Chromosome... 54 2e-06
>gnl|LJGI|TC71712 homologue to UniRef100_A7QNG1 Cluster: Chromosome chr2
scaffold_132, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_132, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (38%)
Length = 1623
Score = 244 bits (123), Expect = 8e-64
Identities = 413/510 (80%)
Strand = Plus / Plus
Query: 1 atgcttcctctccgaaggccagaccttttcagtggcggccttctaaagccttgtagagga 60
|||||||| || |||| |||||||| |||| || || ||||||||||| ||||||||
Sbjct: 252 atgcttccccttagaagaccagacctcttcaaaggtggtcttctaaagccatgtagaggt 311
Query: 61 atattactatttgggcctcctggcaccggaaagacaatgctagcaaaggccattgcaaac 120
|||||||| || |||||||| || ||||| || |||||||| || | || ||||||||
Sbjct: 312 atattacttttcgggcctccgggaaccgggaaaacaatgcttgccnaagcaattgcaaat 371
Query: 121 gaggctggagcgagtttcatcaatgtatccatgtccaccatcacctctaaatggttcggt 180
|| |||||||| |||||||||||||| || |||||||||||||| || |||||||| ||
Sbjct: 372 gaagctggagcaagtttcatcaatgtttcaatgtccaccatcacttcaaaatggtttgga 431
Query: 181 gaagatgagaagaacgttcgtgctctattcacactggcagccaaagtctccccaactatt 240
||||| || ||||| || || ||||| ||| | || ||||| || || | || |||||
Sbjct: 432 gaagacgaaaagaatgtccgcgctctgttctcgctagcagcaaaggttgctcctactata 491
Query: 241 atatttgttgatgaggttgacagtatgcttgggcagcgaacaagagtaggggagcatgaa 300
|| ||||| |||||||||||||| |||||||| ||| | || ||||| || ||||||||
Sbjct: 492 atctttgtcgatgaggttgacagcatgcttggtcagaggactagagttggagagcatgag 551
Query: 301 gccatgcgtaaaataaagaatgagtttatgacactttgggatgggcttatgacaaaacca 360
|||||| | || || || ||||| || ||||||| ||||||||||| | || |||
Sbjct: 552 gccatgaggaagattaaaaatgaattcatgacacactgggatgggctattaactgcacct 611
Query: 361 ggggagcaaatccttgttcttgctgcaaccaataggccatttgacctggatgaggcaatt 420
|| |||||||| || |||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 612 ggtgagcaaattctcgttcttgctgcaaccaataggccatttgacctcgatgaagcaatt 671
Query: 421 atcagacgatttgaaaggagaattatggtaggactaccatctgtggagaacagggaaaag 480
|| ||||| || || | || || ||||| || || |||||||| ||||||||||||| |
Sbjct: 672 attagacggttcgagcgcaggatcatggttggccttccatctgttgagaacagggaaatg 731
Query: 481 atattgaagactcttgtggctaaagaaaag 510
|| |||| ||||| ||||||| ||||||
Sbjct: 732 atcctgaaaactctcctggctaaggaaaag 761
Score = 56.0 bits (28), Expect = 4e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 874 cagtggaatgatttgtatggggaaggtggttcaaggaagaaagagcagttatcttacttc 933
||||||||||| |||||||| ||||| ||| |||| |||||| ||||| | ||||||||
Sbjct: 1071 cagtggaatgagttgtatggagaaggaggtacaagaaagaaacagcagctcacttacttc 1130
Query: 934 cttt 937
||||
Sbjct: 1131 cttt 1134
>gnl|LJGI|AV418768 homologue to UniRef100_A7PHF9 Cluster: Chromosome chr17
scaffold_16, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr17 scaffold_16, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 260
Score = 69.9 bits (35), Expect = 3e-11
Identities = 104/127 (81%)
Strand = Plus / Plus
Query: 58 ggaatattactatttgggcctcctggcaccggaaagacaatgctagcaaaggccattgca 117
|||||||| || ||||||||||||||||| || || |||||||| |||||||| | |||
Sbjct: 87 ggaatattgctctttgggcctcctggcacaggcaaaacaatgcttgcaaaggctgtagca 146
Query: 118 aacgaggctggagcgagtttcatcaatgtatccatgtccaccatcacctctaaatggttc 177
| || || ||||||| |||||| ||| | || ||||||| ||| || || || ||||||
Sbjct: 147 actgaagcaggagcgaatttcattaatatttctatgtccagcattacttccaagtggttc 206
Query: 178 ggtgaag 184
|||||||
Sbjct: 207 ggtgaag 213
>gnl|LJGI|TC67445 similar to UniRef100_A7Q0A4 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 1119
Score = 63.9 bits (32), Expect = 2e-09
Identities = 103/127 (81%)
Strand = Plus / Plus
Query: 58 ggaatattactatttgggcctcctggcaccggaaagacaatgctagcaaaggccattgca 117
|||||||| || ||||||||||||||||| || || |||||||| |||||||| | ||
Sbjct: 15 ggaatattgctctttgggcctcctggcacaggcaaaacaatgcttgcaaaggctgtanca 74
Query: 118 aacgaggctggagcgagtttcatcaatgtatccatgtccaccatcacctctaaatggttc 177
| || || ||||||| |||||| ||| | || ||||||| ||| || || || ||||||
Sbjct: 75 actgaagcaggagcgaatttcattaatatttctatgtccagcattacttccaagtggttc 134
Query: 178 ggtgaag 184
|||||||
Sbjct: 135 ggtgaag 141
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 292 gagcatgaagccatgcgtaaaataaagaatgagtttatg 330
|||||||| || ||||||||||| |||||||||||||||
Sbjct: 249 gagcatgaggctatgcgtaaaatgaagaatgagtttatg 287
>gnl|LJGI|TC81802 similar to UniRef100_A7P2W5 Cluster: Chromosome chr1 scaffold_5,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr1 scaffold_5, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 716
Score = 54.0 bits (27), Expect = 2e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 238 attatatttgttgatgaggttgacagtatgcttgg 272
||||||||||||||||| ||||||||| |||||||
Sbjct: 591 attatatttgttgatgaagttgacagtttgcttgg 625