Miyakogusa Predicted Gene

Lj2g3v2027870.3
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2027870.3 Non Chatacterized Hit- tr|I1JFH6|I1JFH6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.57,0,GH3,GH3
auxin-responsive promoter; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.38458.3
         (912 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77138 similar to UniRef100_A7Q094 Cluster: Chromosome...   121   8e-27

>gnl|LJGI|TC77138 similar to UniRef100_A7Q094 Cluster: Chromosome chr7 scaffold_42,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr7 scaffold_42, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (19%)
          Length = 866

 Score =  121 bits (61), Expect = 8e-27
 Identities = 109/125 (87%)
 Strand = Plus / Plus

                                                                       
Query: 787 tcacttgatacaaatattattaaagaatgttgcattgcggttgaagagcaactaaactat 846
           ||||||||||| ||| |  || | ||||| |||||||||||||||||||||||  |||| 
Sbjct: 119 tcacttgataccaatgtgcttcaggaatgctgcattgcggttgaagagcaactggactac 178

                                                                       
Query: 847 gtatattggcatttgcgcaatgacgggtcaataggaccacttgagatacgtgtggtggag 906
           |||||||| ||||||||| |||||||||| ||||| |||||||||||||| ||||| |||
Sbjct: 179 gtatattgtcatttgcgccatgacgggtccatagggccacttgagatacgcgtggtagag 238

                
Query: 907 gcagg 911
           |||||
Sbjct: 239 gcagg 243