Miyakogusa Predicted Gene

Lj2g3v2017750.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2017750.1 tr|G7IU95|G7IU95_MEDTR Zinc finger protein
CONSTANS-like protein OS=Medicago truncatula
GN=MTR_2g096,42.57,6e-19,CCT,CCT domain; seg,NULL,CUFF.38451.1
         (852 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP073430                                                     214   7e-55
gnl|LJGI|BP033992 similar to UniRef100_A7QNK9 Cluster: Chromosom...   117   1e-25

>gnl|LJGI|BP073430 
          Length = 369

 Score =  214 bits (108), Expect = 7e-55
 Identities = 120/124 (96%)
 Strand = Plus / Minus

                                                                       
Query: 729 cgacgaaaccagcgaggttccaagagctacatgttcaaccacagcagaagaacacgaaga 788
           ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||
Sbjct: 369 cgacgaaaccagcgaggttccagacgctacatgttcaaccacagcagaagaacacgaaga 310

                                                                       
Query: 789 caacttctgggttgagttcgttgaaagtttgaacttttatggagttcctcagtttcagga 848
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 309 caacttctgggttgagttcgttgaaagtttgaacttttatggagttcctcagtctcagga 250

               
Query: 849 gtag 852
           ||||
Sbjct: 249 gtag 246


>gnl|LJGI|BP033992 similar to UniRef100_A7QNK9 Cluster: Chromosome chr2 scaffold_132,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_132, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 506

 Score =  117 bits (59), Expect = 1e-25
 Identities = 98/111 (88%)
 Strand = Plus / Minus

                                                                       
Query: 634 agaagccagaggaagttcaacaagactattaagtacgcatgccgaaagacattagctgac 693
           |||| ||||||||| ||||||||||| |||||||| ||||||||||||||| |||| |||
Sbjct: 506 agaaaccagaggaacttcaacaagaccattaagtatgcatgccgaaagacactagccgac 447

                                                              
Query: 694 aatcgaacacgcatacgtggcagattcgcacgtaacgacgaaaccagcgag 744
           |||||| |||||||||||||||| || ||||| ||||| || ||| |||||
Sbjct: 446 aatcgaccacgcatacgtggcaggtttgcacgcaacgatgagacctgcgag 396