Miyakogusa Predicted Gene
- Lj2g3v2017700.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2017700.2 Non Chatacterized Hit- tr|I3SEL6|I3SEL6_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=2
SV,82,2e-18,BAH,Bromo adjacent homology (BAH) domain;
TFIIS_CENTRAL,Transcription elongation factor S-II,
centra,CUFF.38450.2
(1155 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81980 weakly similar to UniRef100_A7QIW8 Cluster: Chr... 866 0.0
gnl|LJGI|TC64828 similar to UniRef100_A7QIW8 Cluster: Chromosome... 507 e-143
gnl|LJGI|TC62677 similar to UniRef100_A7QIW8 Cluster: Chromosome... 369 e-101
gnl|LJGI|TC63006 similar to UniRef100_A7QIW8 Cluster: Chromosome... 281 5e-75
gnl|LJGI|TC58263 similar to UniRef100_A7QIW8 Cluster: Chromosome... 198 5e-50
>gnl|LJGI|TC81980 weakly similar to UniRef100_A7QIW8 Cluster: Chromosome chr2
scaffold_105, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_105, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (19%)
Length = 469
Score = 866 bits (437), Expect = 0.0
Identities = 461/469 (98%)
Strand = Plus / Plus
Query: 438 ggaaggagttcctaagagtgaccagcatccaaagcctgaaacaccagggagttgtataaa 497
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggaaggagttcctaagagtgaccagcatccaaagcctgaaacaccagggagttgtataaa 60
Query: 498 taatgcctcagagcattatcgcatattagtgagtttcaatgctctaactggagatgttca 557
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 taatgcctcagagcattatcgcatattagtgagtttcaatgctctaactggagatgttca 120
Query: 558 gcgtgacaaatggttggagagatctcttcaacaccttcagtacatgtgtagttctgatga 617
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 121 gcgtgacaaatggttggagagatctcttcaacaccttcagtacatgtgtagatctgatga 180
Query: 618 tagtacggaaagggacaacaaaggatcaaatgtcaattgtgatgaaatcaagcatcaaaa 677
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tagtacagaaagggacaacaaaggatcaaatgtcaattgtgatgaaatcaagcatcaaaa 240
Query: 678 cagtaatacaagttcagaaatagcaaatgactgtcaagacaagggtcaaaagagttccaa 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagtaatacaagttcagaaatagcaaatgactgtcaagacaagggtcaaaagagttccaa 300
Query: 738 gccttttaaatggccagatgctgctgtttcagccatagttgctcttgaaaaagcttcaca 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gccttttaaatggccagatgctgctgtttcagccatagttgctcttgaaaaagcttcaca 360
Query: 798 tgatgctttctcatcagattttcagaagtataaccaaaagttacggcaattaacttttaa 857
||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 361 agatgctttctcataagattttcagaagtataaccaaaagttacgggcattaacttttaa 420
Query: 858 tctcaagaacaatgcattcctagctcgtcgtctattaaatggagagctg 906
| |||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 421 tttcaagaacaatgcattcctagctcgtcgtctaataaatggagagctg 469
>gnl|LJGI|TC64828 similar to UniRef100_A7QIW8 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (20%)
Length = 725
Score = 507 bits (256), Expect = e-143
Identities = 256/256 (100%)
Strand = Plus / Plus
Query: 900 agagctggaaccttccaaaatactaaatatgacatacagtgaattaaaggagggtttgac 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agagctggaaccttccaaaatactaaatatgacatacagtgaattaaaggagggtttgac 60
Query: 960 tgcggaggaaaaaaccaagaaggagccggatgagtcagagcacatgcaaatgacagatgc 1019
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgcggaggaaaaaaccaagaaggagccggatgagtcagagcacatgcaaatgacagatgc 120
Query: 1020 ccgctgctcaagatgtatggagtttaaggtgggattgagggacattatccatgctggaca 1079
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ccgctgctcaagatgtatggagtttaaggtgggattgagggacattatccatgctggaca 180
Query: 1080 taatgaccgttatcagctggaatgtgtttcctgtggtaattcctggtatgcctcccggga 1139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 taatgaccgttatcagctggaatgtgtttcctgtggtaattcctggtatgcctcccggga 240
Query: 1140 tgaggtatcttcgcta 1155
||||||||||||||||
Sbjct: 241 tgaggtatcttcgcta 256
>gnl|LJGI|TC62677 similar to UniRef100_A7QIW8 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (22%)
Length = 734
Score = 369 bits (186), Expect = e-101
Identities = 186/186 (100%)
Strand = Plus / Plus
Query: 1 atggtgacggggcagtggttttatcgtcctgaagaagctgagaaaaagggtggtggaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 atggtgacggggcagtggttttatcgtcctgaagaagctgagaaaaagggtggtggaagc 608
Query: 61 tggatatcacgtgatacgagggagttgttttatagcttccacacggatgacatccctgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tggatatcacgtgatacgagggagttgttttatagcttccacacggatgacatccctgca 668
Query: 121 gagtctgttatgcataagtgtgtggtacattttattcccttacacaaacagcttccaaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gagtctgttatgcataagtgtgtggtacattttattcccttacacaaacagcttccaaaa 728
Query: 181 aggaag 186
||||||
Sbjct: 729 aggaag 734
>gnl|LJGI|TC63006 similar to UniRef100_A7QIW8 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 1057
Score = 281 bits (142), Expect = 5e-75
Identities = 289/338 (85%)
Strand = Plus / Plus
Query: 689 gttcagaaatagcaaatgactgtcaagacaagggtcaaaagagttccaagccttttaaat 748
|||||||| ||||||||| | | ||||||||| ||||||||||||||||||||| | |
Sbjct: 192 gttcagaatcagcaaatgaatataaagacaaggttcaaaagagttccaagcctttgatct 251
Query: 749 ggccagatgctgctgtttcagccatagttgctcttgaaaaagcttcacatgatgctttct 808
|||||| || |||||||||||| ||| |||||| ||||||||||||||||||||| | |
Sbjct: 252 ggccaggtgttgctgtttcagctgtagctgctctggaaaaagcttcacatgatgctcttt 311
Query: 809 catcagattttcagaagtataaccaaaagttacggcaattaacttttaatctcaagaaca 868
||||||||| ||||||||| ||||||||| |||| |||||| || ||||||| |||||
Sbjct: 312 catcagattatcagaagtacaaccaaaagctacgacaattagtattcaatctcaggaaca 371
Query: 869 atgcattcctagctcgtcgtctattaaatggagagctggaaccttccaaaatactaaata 928
||||||||||||| || |||||||| ||||||||| |||||||||| |||||| | ||||
Sbjct: 372 atgcattcctagcacggcgtctattgaatggagagttggaaccttcgaaaatattgaata 431
Query: 929 tgacatacagtgaattaaaggagggtttgactgcggaggaaaaaaccaagaaggagccgg 988
||||| ||| || |||||||||||||||||||| |||| |||||||| ||||| |
Sbjct: 432 tgacacctgctgagttgaaggagggtttgactgcggaagaaataaccaagacagagcctg 491
Query: 989 atgagtcagagcacatgcaaatgacagatgcccgctgc 1026
| ||||||||||| ||||| ||||||||||||| ||||
Sbjct: 492 aggagtcagagcagatgcagatgacagatgccctctgc 529
Score = 60.0 bits (30), Expect = 3e-08
Identities = 70/82 (85%), Gaps = 1/82 (1%)
Strand = Plus / Plus
Query: 497 ataatgcctcagagcattatcgcatattagt-gagtttcaatgctctaactggagatgtt 555
||||||||||||||||||| |||||| |||| | |||||||||| ||||| ||||||
Sbjct: 2 ataatgcctcagagcattaccgcatactagtagggtttcaatgcactaacaggagatacc 61
Query: 556 cagcgtgacaaatggttggaga 577
|| ||||||||| | |||||||
Sbjct: 62 catcgtgacaaaggtttggaga 83
>gnl|LJGI|TC58263 similar to UniRef100_A7QIW8 Cluster: Chromosome chr2 scaffold_105,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_105, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 889
Score = 198 bits (100), Expect = 5e-50
Identities = 256/308 (83%)
Strand = Plus / Plus
Query: 1 atggtgacggggcagtggttttatcgtcctgaagaagctgagaaaaagggtggtggaagc 60
||||| || ||||| |||||||| |||||||||||||| || ||||| || ||||| ||
Sbjct: 552 atggtcacagggcaatggttttaccgtcctgaagaagcagaaaaaaaaggcggtggcagt 611
Query: 61 tggatatcacgtgatacgagggagttgttttatagcttccacacggatgacatccctgca 120
||| |||| ||||| | |||||| | ||||| || |||||| ||||| | ||||||
Sbjct: 612 tggcaatcatgtgatgcaagggagctcttttacagtttccaccgtgatgatgttcctgca 671
Query: 121 gagtctgttatgcataagtgtgtggtacattttattcccttacacaaacagcttccaaaa 180
|| || || ||||||||||||||||| |||||| ||||| |||||||||||||||| ||
Sbjct: 672 gaatccgtcatgcataagtgtgtggtgcattttgttcccatacacaaacagcttccgaat 731
Query: 181 aggaaggaacatcccggatttgttgtacagaaggtgtacgacactgtggaaagaaaactc 240
| ||| | |||||||| ||| |||| | |||||||||||||| || ||||| ||||||
Sbjct: 732 cgtaagcagcatcccgggtttattgtgcgaaaggtgtacgacacagtagaaaggaaactc 791
Query: 241 tggatgctgactgataaggactatgaggatattaaacagcaagagattgatgagcttgtt 300
|||| ||| |||||||||||||||||||| |||||||||||| |||||||||||||||
Sbjct: 792 tggaagctaactgataaggactatgaggacggtaaacagcaagaaattgatgagcttgtt 851
Query: 301 aagaaaac 308
|||||||
Sbjct: 852 cagaaaac 859