Miyakogusa Predicted Gene
- Lj2g3v2003110.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2003110.1 Non Chatacterized Hit- tr|F6HUI7|F6HUI7_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,86.71,0,CHLOROPLAST STEM-LOOP-BINDING PROTEIN,NULL; NAD DEPENDENT
EPIMERASE/DEHYDRATASE,NULL; RmlD_sub_bind,,CUFF.38432.1
(909 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66306 homologue to UniRef100_A7QKD6 Cluster: Chromoso... 1802 0.0
gnl|LJGI|TC57882 similar to UniRef100_A7QKD6 Cluster: Chromosome... 317 7e-86
gnl|LJGI|TC60520 similar to UniRef100_A7QKD6 Cluster: Chromosome... 131 8e-30
gnl|LJGI|TC70135 similar to UniRef100_A7P285 Cluster: Chromosome... 76 4e-13
gnl|LJGI|TC67848 homologue to UniRef100_A7QJR3 Cluster: Chromoso... 68 1e-10
gnl|LJGI|BW600055 homologue to UniRef100_A7QJR3 Cluster: Chromos... 58 1e-07
>gnl|LJGI|TC66306 homologue to UniRef100_A7QKD6 Cluster: Chromosome chr2
scaffold_112, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_112, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (94%)
Length = 1198
Score = 1802 bits (909), Expect = 0.0
Identities = 909/909 (100%)
Strand = Plus / Plus
Query: 1 atgggttcagaagctaacaatggtgatcagaatcagaatcagctcaagtttctgatctac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atgggttcagaagctaacaatggtgatcagaatcagaatcagctcaagtttctgatctac 98
Query: 61 ggtcgaaccggttggattggcggtttattgggcaagctctgcgatcagcaaggcatccca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 ggtcgaaccggttggattggcggtttattgggcaagctctgcgatcagcaaggcatccca 158
Query: 121 tacgcctacggtgacgggaggctggagaaccggccgtcgctggaggcggacatagcggcg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 tacgcctacggtgacgggaggctggagaaccggccgtcgctggaggcggacatagcggcg 218
Query: 181 gtgagtccaacccacgtgttcaacgcggcgggagtgacgggtagacccaacgtggactgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gtgagtccaacccacgtgttcaacgcggcgggagtgacgggtagacccaacgtggactgg 278
Query: 241 tgcgagagtcacaaggttgagaccattcgaaccaacgtggtcggaactctcacgttggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 tgcgagagtcacaaggttgagaccattcgaaccaacgtggtcggaactctcacgttggct 338
Query: 301 gacgtgtgccgccagagagggttgatcctcatcaactacgccaccggctgcatctttgag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gacgtgtgccgccagagagggttgatcctcatcaactacgccaccggctgcatctttgag 398
Query: 361 tatgattcttctcaccctctcggctccggcgtcggtttcaaggaggaagacactcccaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 tatgattcttctcaccctctcggctccggcgtcggtttcaaggaggaagacactcccaat 458
Query: 421 ttcattggttccttctactccaagaccaaggccatggtagaggatctattgaagaactac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ttcattggttccttctactccaagaccaaggccatggtagaggatctattgaagaactac 518
Query: 481 gagaatgtgtgtaccttgcgagtgaggatgccaatctcctctgatttaaccaaccctcgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gagaatgtgtgtaccttgcgagtgaggatgccaatctcctctgatttaaccaaccctcgc 578
Query: 541 aatttcatcaccaagatcactaggtatgaaaaggttgtcaacatccccaattcgatgacc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 aatttcatcaccaagatcactaggtatgaaaaggttgtcaacatccccaattcgatgacc 638
Query: 601 atattggatgagcttattcccatctccatcgagatggccaagaggaatctcactggtatc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 atattggatgagcttattcccatctccatcgagatggccaagaggaatctcactggtatc 698
Query: 661 tggaatttcactagccctggtgtggtctctcacaatgagattttggaaatgtatagggac 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 699 tggaatttcactagccctggtgtggtctctcacaatgagattttggaaatgtatagggac 758
Query: 721 tatgtggatccgaattttacatataagaatttcactcttgaagaacaagctaaggtaatt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759 tatgtggatccgaattttacatataagaatttcactcttgaagaacaagctaaggtaatt 818
Query: 781 gttgctcccagaagcaacaatgagcttgatgcgtcgaaattgaagaaggaattccctcag 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 gttgctcccagaagcaacaatgagcttgatgcgtcgaaattgaagaaggaattccctcag 878
Query: 841 ctcttgtccatcaaggattccctcatcaagtatgtgttcgacccaaatcacaaggttgta 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 879 ctcttgtccatcaaggattccctcatcaagtatgtgttcgacccaaatcacaaggttgta 938
Query: 901 gcttgaaca 909
|||||||||
Sbjct: 939 gcttgaaca 947
>gnl|LJGI|TC57882 similar to UniRef100_A7QKD6 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1356
Score = 317 bits (160), Expect = 7e-86
Identities = 523/644 (81%)
Strand = Plus / Plus
Query: 169 gacatagcggcggtgagtccaacccacgtgttcaacgcggcgggagtgacgggtagaccc 228
||||| |||| ||||| ||||| |||||||||||||| || || || || ||| | |||
Sbjct: 237 gacatcgcggaggtgaagccaactcacgtgttcaacgccgccggtgtcactggtcgcccc 296
Query: 229 aacgtggactggtgcgagagtcacaaggttgagaccattcgaaccaacgtggtcggaact 288
|||||||||||||| |||| | ||||||| |||||||| || |||||||||| || ||
Sbjct: 297 aacgtggactggtgtgagactaacaaggtcgagaccatccgcgccaacgtggttggcacg 356
Query: 289 ctcacgttggctgacgtgtgccgccagagagggttgatcctcatcaactacgccaccggc 348
|||||| | ||||| |||||||| || | || | ||| || |||||| ||||||||||
Sbjct: 357 ctcacgcttgctgatgtgtgccgtgagcgcggaatcatcgtcgtcaacttcgccaccggc 416
Query: 349 tgcatctttgagtatgattcttctcaccctctcggctccggcgtcggtttcaaggaggaa 408
|||||||| ||||| ||||| ||| || ||||| || || |||| |||||||| ||
Sbjct: 417 tgcatcttcgagtacgattccggtcatcccctcggatctggtatcggattcaaggaagag 476
Query: 409 gacactcccaatttcattggttccttctactccaagaccaaggccatggtagaggatcta 468
|| |||| |||||||| ||||| ||||||||||| ||||| |||||||| || ||||||
Sbjct: 477 gattctcctaatttcatcggttcgttctactccaaaaccaaagccatggttgaagatcta 536
Query: 469 ttgaagaactacgagaatgtgtgtaccttgcgagtgaggatgccaatctcctctgattta 528
||| ||| || || ||||||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 537 ctgaggaattatgataatgtgtgtaccttgcgagtgaggatgccgatctcatcagattta 596
Query: 529 accaaccctcgcaatttcatcaccaagatcactaggtatgaaaaggttgtcaacatcccc 588
| ||||| |||||||||||||| |||||| || | || || ||||| || |||| ||
Sbjct: 597 tcaaacccgcgcaatttcatcacgaagatctctcgctacgagaaggtggtggacattcca 656
Query: 589 aattcgatgaccatattggatgagcttattcccatctccatcgagatggccaagaggaat 648
||||| ||||| || |||| |||||| |||||||||| || |||||||| |||||||||
Sbjct: 657 aattcaatgacaatcctggacgagcttcttcccatctcgattgagatggcgaagaggaat 716
Query: 649 ctcactggtatctggaatttcactagccctggtgtggtctctcacaatgagattttggaa 708
|||||||| |||||||| ||||| | |||||| ||||| ||||||||||| || | |
Sbjct: 717 ctcactgggatctggaacttcacaaaccctggagtggtgagccacaatgagatcttagca 776
Query: 709 atgtatagggactatgtggatccgaattttacatataagaatttcactcttgaagaacaa 768
||||| | ||| ||| | || | || || || | ||||||||||| ||||| |||||
Sbjct: 777 atgtacaaggagtatattgactcaaacttcacctggaagaatttcacccttgaggaacag 836
Query: 769 gctaaggtaattgttgctcccagaagcaacaatgagcttgatgc 812
|| ||||| |||||||||||| | ||||||||||||||||||||
Sbjct: 837 gccaaggtcattgttgctccccggagcaacaatgagcttgatgc 880
>gnl|LJGI|TC60520 similar to UniRef100_A7QKD6 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 751
Score = 131 bits (66), Expect = 8e-30
Identities = 234/290 (80%)
Strand = Plus / Plus
Query: 169 gacatagcggcggtgagtccaacccacgtgttcaacgcggcgggagtgacgggtagaccc 228
||||| |||| ||||| ||||| |||||||||||||| || || || || ||| | |||
Sbjct: 246 gacatcgcggaggtgaagccaactcacgtgttcaacgccgccggtgtcactggtcgcccc 305
Query: 229 aacgtggactggtgcgagagtcacaaggttgagaccattcgaaccaacgtggtcggaact 288
|||||||||||||| |||| | ||||||| |||||||| || |||||||||| || ||
Sbjct: 306 aacgtggactggtgtgagactaacaaggtcgagaccatccgcgccaacgtggttggcacg 365
Query: 289 ctcacgttggctgacgtgtgccgccagagagggttgatcctcatcaactacgccaccggc 348
|||||| | ||||| |||||||| || | || | ||| || |||||| ||||||||||
Sbjct: 366 ctcacgcttgctgatgtgtgccgtgagcgcggaatcatcgtcgtcaacttcgccaccggc 425
Query: 349 tgcatctttgagtatgattcttctcaccctctcggctccggcgtcggtttcaaggaggaa 408
|||||||| ||||| ||||| ||| || ||||| || || |||| |||||||| ||
Sbjct: 426 tgcatcttcgagtacgattccggtcatcccctcggatctggtatcggattcaaggaagag 485
Query: 409 gacactcccaatttcattggttccttctactccaagaccaaggccatggt 458
|| |||| |||||||| ||||| ||||||||||| ||||| ||||||||
Sbjct: 486 gattctcctaatttcatcggttcgttctactccaaaaccaaagccatggt 535
>gnl|LJGI|TC70135 similar to UniRef100_A7P285 Cluster: Chromosome chr19 scaffold_4,
whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
Chromosome chr19 scaffold_4, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (40%)
Length = 1288
Score = 75.8 bits (38), Expect = 4e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 751 ttcactcttgaagaacaagctaaggtaattgttgctcccagaagcaacaatgagcttgat 810
|||| ||| ||||| ||||| ||||||||||||||||| ||||||||||||| || |||
Sbjct: 762 ttcaatctggaagagcaagccaaggtaattgttgctcctcgaagcaacaatgaactggat 821
Query: 811 gcgtcgaaattgaagaaggaattccc 836
|| || |||||||| || ||||||||
Sbjct: 822 gcttccaaattgaataacgaattccc 847
Score = 63.9 bits (32), Expect = 2e-09
Identities = 95/116 (81%)
Strand = Plus / Plus
Query: 349 tgcatctttgagtatgattcttctcaccctctcggctccggcgtcggtttcaaggaggaa 408
||||| |||||||||||| | || || ||| ||||||||| | ||||| |||||||||
Sbjct: 360 tgcatatttgagtatgatgcatcgcatcctgaaggctccggcattggttttaaggaggaa 419
Query: 409 gacactcccaatttcattggttccttctactccaagaccaaggccatggtagagga 464
|||| |||||||||||||| || ||||| ||||| || || || ||||| |||||
Sbjct: 420 gacaagcccaatttcattggctctttctattccaaaactaaagctatggttgagga 475
>gnl|LJGI|TC67848 homologue to UniRef100_A7QJR3 Cluster: Chromosome undetermined
scaffold_107, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_107,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (27%)
Length = 944
Score = 67.9 bits (34), Expect = 1e-10
Identities = 73/86 (84%)
Strand = Plus / Plus
Query: 751 ttcactcttgaagaacaagctaaggtaattgttgctcccagaagcaacaatgagcttgat 810
|||| ||| ||||| ||||| ||||| ||||||||||| ||||||||||||| || |||
Sbjct: 397 ttcaatctggaagagcaagccaaggtgattgttgctcctcgaagcaacaatgaactggat 456
Query: 811 gcgtcgaaattgaagaaggaattccc 836
|| || |||||||| | |||||||||
Sbjct: 457 gcttccaaattgaatacggaattccc 482
Score = 54.0 bits (27), Expect = 2e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 394 ggtttcaaggaggaagacactcccaatttcattggttccttctactccaagaccaaggcc 453
||||| ||||||||||||| |||||||||||||| || ||||| ||||| || || ||
Sbjct: 40 ggttttaaggaggaagacaagcccaatttcattggctctttctattccaaaactaaagct 99
Query: 454 atggtagagga 464
||||| |||||
Sbjct: 100 atggttgagga 110
>gnl|LJGI|BW600055 homologue to UniRef100_A7QJR3 Cluster: Chromosome undetermined
scaffold_107, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_107,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (5%)
Length = 469
Score = 58.0 bits (29), Expect = 1e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 760 gaagaacaagctaaggtaattgttgctcccagaagcaacaatgagcttgatgc 812
||||||||||| ||||| ||||||||||| ||||||||||||| || |||||
Sbjct: 409 gaagaacaagccaaggtgattgttgctcctcgaagcaacaatgaactggatgc 461