Miyakogusa Predicted Gene
- Lj2g3v2003070.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2003070.1 Non Chatacterized Hit- tr|I1JA22|I1JA22_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.58276
PE,92.04,0,KNOX1,KNOX1; KNOX2,KNOX2; Homeobox_KN,Homeobox KN domain;
ELK,ELK; no description,Homeodomain-like; ,CUFF.38403.1
(876 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78918 similar to UniRef100_A7QKD4 Cluster: Chromosome... 1699 0.0
gnl|LJGI|BP055996 UniRef100_A5Y4G9 Cluster: Class II KNOX homeob... 240 1e-62
gnl|LJGI|AV771184 similar to UniRef100_A5Y4G9 Cluster: Class II ... 174 6e-43
gnl|LJGI|AV773898 90 3e-17
gnl|LJGI|TC71194 homologue to UniRef100_A5Y4G8 Cluster: Class II... 80 3e-14
gnl|LJGI|FS338485 UniRef100_Q3U247 Cluster: NOD-derived CD11c +v... 78 1e-13
gnl|LJGI|TC79746 similar to UniRef100_A7QS15 Cluster: Chromosome... 52 6e-06
>gnl|LJGI|TC78918 similar to UniRef100_A7QKD4 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (91%)
Length = 1456
Score = 1699 bits (857), Expect = 0.0
Identities = 873/877 (99%), Gaps = 1/877 (0%)
Strand = Plus / Plus
Query: 1 atgcaagaacccaacctcggaatgatgggcggtggtttcaccggtgatgtttcagcttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 atgcaagaacccaacctcggaatgatgggcggtggtttcaccggtgatgtttcagcttcc 283
Query: 61 ggcgaccaccaccaccgccaactcaaggctgaaatcgccactcaccctctctacgaacag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 ggcgaccaccaccaccgccaactcaaggctgaaatcgccactcaccctctctacgaacag 343
Query: 121 cttctcgcagcacacgtcgcgtgtctccgagtcgccactccgatcgaccagcttccacta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 cttctcgcagcacacgtcgcgtgtctccgagtcgccactccgatcgaccagcttccacta 403
Query: 181 attgatgcgcagttatctcaatctcaccatcttctccgctcgattgtctctcaacacact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 attgatgcgcagttatctcaatctcaccatcttctccgctcgattgtctctcaacacact 463
Query: 241 cactctcttcctccgcatgatcgccaagaacttgataact-tcctggcacagtatttgat 299
|||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||
Sbjct: 464 cactctcttcctccgcatgatcgccaagaacttgataactgtcctggcacagtatgtgat 523
Query: 300 tgttctgtgtaccttcaaagatcagcttcagcagcatgtcagagttcatgccgtcgaggc 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 ggttctgtgtaccttcaaagatcagcttcagcagcatgtcagagttcatgccgtcgaggc 583
Query: 360 tgtcatggcttgccgtgatattgaaaacaccttgcaggctctcacaggagtcagtttggg 419
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tgtcatggctggccgtgatattgaaaacaccttgcaggctctcacaggagtcagtttggg 643
Query: 420 agaaggaactggtgccacaatgtcagatgatgaagatgatttgcagatggatttttcttt 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 644 agaaggaactggtgccacaatgtcagatgatgaagatgatttgcagatggatttttcttt 703
Query: 480 agatcaatctagcactgaagggcatgacatgatgggatttggtcccttacttcctacaga 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 704 agatcaatctagcactgaagggcatgacatgatgggatttggtcccttacttcctacaga 763
Query: 540 atctgaaaggtcactgatggaaagagttcgtcaggaactaaagattgagctgaaacaggg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 764 atctgaaaggtcactgatggaaagagttcgtcaggaactaaagattgagctgaaacaggg 823
Query: 600 ttttaaatccagaattgaagatgtaagggaggaaatattaaggaaaagaagagctgggaa 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 824 ttttaaatccagaattgaagatgtaagggaggaaatattaaggaaaagaagagctgggaa 883
Query: 660 attacctggtgacacaactacagttttaaagaactggtggcagcaacatgcaaagtggcc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 884 attacctggtgacacaactacagttttaaagaactggtggcagcaacatgcaaagtggcc 943
Query: 720 ttacccaacagaagatgacaaggcaaaacttgtggaggagacgggtttgcagctgaagca 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 ttacccaacagaagatgacaaggcaaaacttgtggaggagacgggtttgcagctgaagca 1003
Query: 780 gattaataattggttcatcaaccaaaggaaacgcaactggcacagcaactctcaatcggt 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 gattaataattggttcatcaaccaaaggaaacgcaactggcacagcaactctcaatcggt 1063
Query: 840 tacctctttgaagtccaaacgcaagagaatgtagtcc 876
|||||||||||||||||||||||||||||||||||||
Sbjct: 1064 tacctctttgaagtccaaacgcaagagaatgtagtcc 1100
>gnl|LJGI|BP055996 UniRef100_A5Y4G9 Cluster: Class II KNOX homeobox transcription
factor; n=1; Medicago truncatula|Rep: Class II KNOX
homeobox transcription factor - Medicago truncatula
(Barrel medic), partial (14%)
Length = 546
Score = 240 bits (121), Expect = 1e-62
Identities = 121/121 (100%)
Strand = Plus / Minus
Query: 746 aacttgtggaggagacgggtttgcagctgaagcagattaataattggttcatcaaccaaa 805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aacttgtggaggagacgggtttgcagctgaagcagattaataattggttcatcaaccaaa 487
Query: 806 ggaaacgcaactggcacagcaactctcaatcggttacctctttgaagtccaaacgcaaga 865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 486 ggaaacgcaactggcacagcaactctcaatcggttacctctttgaagtccaaacgcaaga 427
Query: 866 g 866
|
Sbjct: 426 g 426
>gnl|LJGI|AV771184 similar to UniRef100_A5Y4G9 Cluster: Class II KNOX homeobox
transcription factor; n=1; Medicago truncatula|Rep:
Class II KNOX homeobox transcription factor - Medicago
truncatula (Barrel medic), partial (12%)
Length = 402
Score = 174 bits (88), Expect = 6e-43
Identities = 115/124 (92%)
Strand = Plus / Minus
Query: 753 ggaggagacgggtttgcagctgaagcagattaataattggttcatcaaccaaaggaaacg 812
||||||||||||||||||| |||| ||||||||||||||||||| | ||| |||||||||
Sbjct: 402 ggaggagacgggtttgcagttgaaccagattaataattggttcagccacccaaggaaacg 343
Query: 813 caactggcacagcaactctcaatcggttacctctttgaagtccaaacgcaagagaatgta 872
||||||||||||||||||||||||||||||||||||||||||| ||| | |||||| |||
Sbjct: 342 caactggcacagcaactctcaatcggttacctctttgaagtcccaaccccagagaaagta 283
Query: 873 gtcc 876
||||
Sbjct: 282 gtcc 279
>gnl|LJGI|AV773898
Length = 441
Score = 89.7 bits (45), Expect = 3e-17
Identities = 90/105 (85%)
Strand = Plus / Minus
Query: 772 ctgaagcagattaataattggttcatcaaccaaaggaaacgcaactggcacagcaactct 831
||||||| |||| || ||||||| ||| ||| |||| ||||| ||||||||||| |||||
Sbjct: 441 ctgaagccgattcattattggtttatccacccaaggtaacgccactggcacagccactct 382
Query: 832 caatcggttacctctttgaagtccaaacgcaagagaatgtagtcc 876
| |||||||||||||||| ||||| || | ||||||||||||||
Sbjct: 381 ccatcggttacctctttgtagtccctaccccagagaatgtagtcc 337
>gnl|LJGI|TC71194 homologue to UniRef100_A5Y4G8 Cluster: Class II KNOX homeobox
transcription factor; n=1; Medicago truncatula|Rep:
Class II KNOX homeobox transcription factor - Medicago
truncatula (Barrel medic), partial (21%)
Length = 723
Score = 79.8 bits (40), Expect = 3e-14
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 712 aagtggccttacccaacagaagatgacaaggcaaaacttgtggaggagacgggtttgcag 771
|||||||||||||| ||||| || || ||||||| | ||| |||| ||||||||||||
Sbjct: 121 aagtggccttaccctacagaggaggataaggcaaggttggtgcaggaaacgggtttgcag 180
Query: 772 ctgaagcagattaataattggttcatcaaccaaaggaaacgcaactggcacagcaa 827
|||||||||| ||||| ||||| ||||| |||||||| | |||||||| |||||
Sbjct: 181 ttgaagcagatcaataactggtttatcaatcaaaggaagaggaactggcatagcaa 236
>gnl|LJGI|FS338485 UniRef100_Q3U247 Cluster: NOD-derived CD11c +ve dendritic cells
cDNA RIKEN full-length enriched library clone:,
partial (3%)
Length = 492
Score = 77.8 bits (39), Expect = 1e-13
Identities = 42/43 (97%)
Strand = Plus / Plus
Query: 1 atgcaagaacccaacctcggaatgatgggcggtggtttcaccg 43
|||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 450 atgcaagaacccaacctcagaatgatgggcggtggtttcaccg 492
>gnl|LJGI|TC79746 similar to UniRef100_A7QS15 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (59%)
Length = 1268
Score = 52.0 bits (26), Expect = 6e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 421 gaaggaactggtgccacaatgtcagatgatgaagatga 458
|||||||| ||||| ||||||||||| |||||||||||
Sbjct: 506 gaaggaacaggtgcaacaatgtcagacgatgaagatga 543