Miyakogusa Predicted Gene

Lj2g3v2002920.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2002920.1 tr|A9QY39|A9QY39_LOTJA Subtilase OS=Lotus
japonicus GN=SbtM3 PE=4 SV=1,100,0,Subtilisin-like,Peptidase S8/S53,
subtilisin/kexin/sedolisin; SUBTILISIN,Peptidase S8,
subtilisin-re,gene.g42775.t1.1
         (2418 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DN652254 UniRef100_A9QY40 Cluster: Subtilase; n=1; Lotu...    84   5e-15

>gnl|LJGI|DN652254 UniRef100_A9QY40 Cluster: Subtilase; n=1; Lotus japonicus|Rep:
            Subtilase - Lotus japonicus, partial (10%)
          Length = 238

 Score = 83.8 bits (42), Expect = 5e-15
 Identities = 83/94 (88%), Gaps = 2/94 (2%)
 Strand = Plus / Plus

                                                                        
Query: 2221 gttggaatcgttccacagtccg-gtccttgtcccaaccccaagaaacttg-agtgtgagt 2278
            ||||||||| |||||||||||  ||||||||| ||| |||||||| |||| |||||||||
Sbjct: 117  gttggaatcattccacagtccttgtccttgtctcaaacccaagaagcttggagtgtgagt 176

                                              
Query: 2279 tatgtgcagtgaaagagtactctcaggtcggatt 2312
            | |||||||||||||||| ||||| || ||||||
Sbjct: 177  tgtgtgcagtgaaagagtcctctcgggacggatt 210



 Score = 54.0 bits (27), Expect = 4e-06
 Identities = 78/95 (82%)
 Strand = Plus / Minus

                                                                       
Query: 372 tccaagcttcttgggtttgcaacaaggattaggactatggaaaggttccaattctggcaa 431
           |||||||||||||||||||  |||||||  |||||| ||||| | ||||||   ||||||
Sbjct: 168 tccaagcttcttgggtttgagacaaggacaaggactgtggaatgattccaaccttggcaa 109

                                              
Query: 432 aggggtcatcattggaatcttggacacagggatat 466
           ||| || || |||||| || | |||||||| ||||
Sbjct: 108 aggtgttataattggagtcatagacacaggcatat 74