Miyakogusa Predicted Gene
- Lj2g3v2002890.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2002890.1 tr|B9GW30|B9GW30_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_646517 PE=4
SV=1,83.38,0,seg,NULL; TPT,Domain of unknown function DUF250;
EamA,Drug/metabolite transporter; Multidrug
resista,NODE_56262_length_1461_cov_126.724159.path2.1
(1056 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC69397 similar to UniRef100_A7QKA3 Cluster: Chromosome... 2064 0.0
gnl|LJGI|FS361014 homologue to UniRef100_A7QKA3 Cluster: Chromos... 551 e-156
gnl|LJGI|TC60599 similar to UniRef100_A7QKA3 Cluster: Chromosome... 535 e-151
gnl|LJGI|BW605780 similar to UniRef100_A7QKA3 Cluster: Chromosom... 161 1e-38
gnl|LJGI|TC76547 homologue to UniRef100_A7QKA3 Cluster: Chromoso... 78 1e-13
gnl|LJGI|AW720113 similar to UniRef100_Q59IV5 Cluster: Plastidic... 52 7e-06
>gnl|LJGI|TC69397 similar to UniRef100_A7QKA3 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (97%)
Length = 1475
Score = 2064 bits (1041), Expect = 0.0
Identities = 1054/1057 (99%), Gaps = 1/1057 (0%)
Strand = Plus / Plus
Query: 1 atggtggaggcgcagacatggactacccgccgaatgagcaacccaaggttaaccgccgac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 atggtggaggcgcagacatggactacccgccgaatgagcaacccaaggttaaccgccgac 133
Query: 61 gaagtcgcgctcgagattccggccaccccacccggtgacgtccgccactggcaacccttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gaagtcgcgctcgagattccggccaccccacccggtgacgtccgccactggcaacccttc 193
Query: 121 acctcccatttctctcccgccatggtaaccgccgcgatcatcgcctcatggtacctctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 acctcccatttctctcccgccatggtaaccgccgcgatcatcgcctcatggtacctctcc 253
Query: 181 aacatcggcgtcctcctcctcaacaagtacctcctcagcttctacggttaccgctaccct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 aacatcggcgtcctcctcctcaacaagtacctcctcagcttctacggttaccgctaccct 313
Query: 241 atcttcctcaccatgctccacatgatttcctgctccgcctacagctacggcgcaatcaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 atcttcctcaccatgctccacatgatttcctgctccgcctacagctacggcgcaatcaac 373
Query: 301 ttcctcgacctcgttcccttacagcacattcactccaagaaacagttcctcaagatcttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ttcctcgacctcgttcccttacagcacattcactccaagaaacagttcctcaagatcttc 433
Query: 361 gctctcagcatcatcttctgcttctccgtcgtctgcggcaacacctccttacgctacctc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 gctctcagcatcatcttctgcttctccgtcgtctgcggcaacacctccttacgctacctc 493
Query: 421 cctgtttccttcaac-caagcaatcggcgccaccacccccttcttcaccgccgtcttcgc 479
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 cctgtttccttcaactcaagcaatcggcgccaccacccccttcttcaccgccgtcttcgc 553
Query: 480 cttcatcatcacctgcaagaaagaatccgccgaggtttacctcgctctgttgccggtagt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 cttcatcatcacctgcaagaaagaatccgccgaggtttacctcgctctgttgccggtagt 613
Query: 540 cttcgggattgttctttccagcaacagtgagcctctgttccatctcttcggattcttggt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 cttcgggattgttctttccagcaacagtgagcctctgttccatctcttcggattcttggt 673
Query: 600 ctgcgtcggttccacggcggggcgtgctctgaaatcggtggttcaggggattatcttgac 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ctgcgtcggttccacggcggggcgtgctctgaaatcggtggttcaggggattatcttgac 733
Query: 660 ctctgaatcggagaagctgaactccatgaacttgcttctctacatggctcccatggcggc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ctctgaatcggagaagctgaactccatgaacttgcttctctacatggctcccatggcggc 793
Query: 720 gatgattttgcttcctttcactctctacatcgaagggaatgtggcggcggttacgcttga 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 gatgattttgcttcctttcactctctacatcgaagggaatgtggcggcggttacgcttga 853
Query: 780 gaaagttaaaggggatcggtttatcgttttcttgttggttgggaacgcgacggtggcgta 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 gaaagttaaaggggatcggtttatcgttttcttgttggttgggaacgcgacggtggcgta 913
Query: 840 tttggtgaacctcacgaatttcttggttaccaaacataccagtgcgttgacattgcaagt 899
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 914 tttggtgaacctcacgaatttcttggttaccaaacataccagtgcgttgacattgcaagt 973
Query: 900 gttggggaatgctaaagcggcggtggcggcggtggtttctgttctgattttcaggaaccc 959
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 974 gttggggaatgctaaagcggcggtggcggcggtggtttctgttctgattttcaggaaccc 1033
Query: 960 ggtgacggtgatgggtatcactggattcgctgtgacaatcatgggtgtgcttctctacag 1019
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1034 ggtgacggtgatgggtatcactggattcgctgtgaccatcatgggtgtgcttctctacag 1093
Query: 1020 tgaggcaaagaagagatcaaaagttacatctcattga 1056
|||||| ||||||||||||||||||||||||||||||
Sbjct: 1094 tgaggccaagaagagatcaaaagttacatctcattga 1130
>gnl|LJGI|FS361014 homologue to UniRef100_A7QKA3 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 746
Score = 551 bits (278), Expect = e-156
Identities = 281/282 (99%)
Strand = Plus / Minus
Query: 775 cttgagaaagttaaaggggatcggtttatcgttttcttgttggttgggaacgcgacggtg 834
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 cttgagaaagctaaaggggatcggtttatcgttttcttgttggttgggaacgcgacggtg 687
Query: 835 gcgtatttggtgaacctcacgaatttcttggttaccaaacataccagtgcgttgacattg 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gcgtatttggtgaacctcacgaatttcttggttaccaaacataccagtgcgttgacattg 627
Query: 895 caagtgttggggaatgctaaagcggcggtggcggcggtggtttctgttctgattttcagg 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 caagtgttggggaatgctaaagcggcggtggcggcggtggtttctgttctgattttcagg 567
Query: 955 aacccggtgacggtgatgggtatcactggattcgctgtgacaatcatgggtgtgcttctc 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 aacccggtgacggtgatgggtatcactggattcgctgtgacaatcatgggtgtgcttctc 507
Query: 1015 tacagtgaggcaaagaagagatcaaaagttacatctcattga 1056
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tacagtgaggcaaagaagagatcaaaagttacatctcattga 465
>gnl|LJGI|TC60599 similar to UniRef100_A7QKA3 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 842
Score = 535 bits (270), Expect = e-151
Identities = 522/606 (86%)
Strand = Plus / Plus
Query: 157 atcatcgcctcatggtacctctccaacatcggcgtcctcctcctcaacaagtacctcctc 216
|||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 231 atcatcgcatcatggtacctctccaacatcggtgtcctcctcctcaacaagtacctcctc 290
Query: 217 agcttctacggttaccgctaccctatcttcctcaccatgctccacatgatttcctgctcc 276
||||||||| | ||| ||||| ||||||||||| |||||||||||||| |||||| ||
Sbjct: 291 gccttctacggcttccgttacccaatcttcctcacaatgctccacatgatctcctgcgcc 350
Query: 277 gcctacagctacggcgcaatcaacttcctcgacctcgttcccttacagcacattcactcc 336
| ||||||||| | ||| | || ||||||| |||||| |||| ||||| || ||||||
Sbjct: 351 gtctacagctatgccgccaccaccttcctccgcctcgtcccctcccagcaaatccactcc 410
Query: 337 aagaaacagttcctcaagatcttcgctctcagcatcatcttctgcttctccgtcgtctgc 396
| ||||| |||||||||||| |||| |||| | |||||||||||||||||||||||||
Sbjct: 411 accaaacaattcctcaagatcctcgccctcaccgccatcttctgcttctccgtcgtctgc 470
Query: 397 ggcaacacctccttacgctacctccctgtttccttcaaccaagcaatcggcgccaccacc 456
|||||||||||| | | |||| |||| ||||| ||||| ||||| |||||||||||||||
Sbjct: 471 ggcaacacctccctccactacatccccgtttcgttcaatcaagccatcggcgccaccacc 530
Query: 457 cccttcttcaccgccgtcttcgccttcatcatcacctgcaagaaagaatccgccgaggtt 516
|||||||||||||||||||||||||||||||||||||| ||| || |||||| ||||
Sbjct: 531 cccttcttcaccgccgtcttcgccttcatcatcacctgtaagcgcgagaccgccggggtt 590
Query: 517 tacctcgctctgttgccggtagtcttcgggattgttctttccagcaacagtgagcctctg 576
|||||||| || ||||| || ||| |||| || || | | |||||||| ||||| ||
Sbjct: 591 tacctcgccctcttgccagtcgtcctcggaatcgtcgtcgctagcaacagcgagcccctc 650
Query: 577 ttccatctcttcggattcttggtctgcgtcggttccacggcggggcgtgctctgaaatcg 636
|| || |||||||||||| | |||||| |||| ||||| |||||||||||||||||||||
Sbjct: 651 tttcacctcttcggattcctcgtctgcctcggctccaccgcggggcgtgctctgaaatcg 710
Query: 637 gtggttcaggggattatcttgacctctgaatcggagaagctgaactccatgaacttgctt 696
||||| ||||||||| | | ||||| |||||||||||||| |||||||||| | |||
Sbjct: 711 gtggtgcaggggattttgctaacctccgaatcggagaagcttcactccatgaatctcctt 770
Query: 697 ctctacatggctcccatggcggcgatgattttgcttcctttcactctctacatcgaaggg 756
|||||||||||||||||||| ||| |||||||||| ||||||||||||||||| ||||||
Sbjct: 771 ctctacatggctcccatggctgcgctgattttgctacctttcactctctacattgaaggg 830
Query: 757 aatgtg 762
||||||
Sbjct: 831 aatgtg 836
>gnl|LJGI|BW605780 similar to UniRef100_A7QKA3 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 474
Score = 161 bits (81), Expect = 1e-38
Identities = 156/181 (86%)
Strand = Plus / Plus
Query: 157 atcatcgcctcatggtacctctccaacatcggcgtcctcctcctcaacaagtacctcctc 216
|||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 289 atcatcgcatcgtggtacctctccaacatcggtgtcctcctcctcaacaagtacctcctc 348
Query: 217 agcttctacggttaccgctaccctatcttcctcaccatgctccacatgatttcctgctcc 276
||||||||| | ||| ||||| ||||||||||| |||||||||||||| |||||| ||
Sbjct: 349 gccttctacggcttccgttacccaatcttcctcacaatgctccacatgatctcctgcgcc 408
Query: 277 gcctacagctacggcgcaatcaacttcctcgacctcgttcccttacagcacattcactcc 336
| ||||||||| | ||| | || ||||||| |||||| |||| ||||| || ||||||
Sbjct: 409 gtctacagctatgccgccaccaccttcctccgcctcgtcccctcccagcaaatccactcc 468
Query: 337 a 337
|
Sbjct: 469 a 469
>gnl|LJGI|TC76547 homologue to UniRef100_A7QKA3 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 794
Score = 77.8 bits (39), Expect = 1e-13
Identities = 111/135 (82%)
Strand = Plus / Plus
Query: 922 gtggcggcggtggtttctgttctgattttcaggaacccggtgacggtgatgggtatcact 981
|||||||| || ||||| ||| |||| ||||||||||| || ||||||||||| || |
Sbjct: 2 gtggcggctgttgtttcggttttgatattcaggaaccctgtcacggtgatgggaatggcg 61
Query: 982 ggattcgctgtgacaatcatgggtgtgcttctctacagtgaggcaaagaagagatcaaaa 1041
|| || | || ||| ||||||||||| || ||||||||||| ||||||||||| |||
Sbjct: 62 gggtttggcgttacagtcatgggtgtggggctgtacagtgaggccaagaagagatccaaa 121
Query: 1042 gttacatctcattga 1056
|||||| ||||||||
Sbjct: 122 gttacaactcattga 136
>gnl|LJGI|AW720113 similar to UniRef100_Q59IV5 Cluster: Plastidic phosphate
translocator-like protein2; n=1; Mesembryanthemum
crystallinum|Rep: Plastidic phosphate translocator-like
protein2 - Mesembryanthemum crystallinum (Common ice
plant), partial (35%)
Length = 512
Score = 52.0 bits (26), Expect = 7e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 196 ctcctcaacaagtacctcctcagcttctacggttaccgctaccctatcttcctcaccatg 255
||||||||||||||||| |||||| |||||| | | ||||| |||||||||||||||
Sbjct: 263 ctcctcaacaagtaccttctcagcaactacggcttcaagtacccaatcttcctcaccatg 322
Query: 256 ctccacatga 265
||||||||
Sbjct: 323 tgccacatga 332