Miyakogusa Predicted Gene
- Lj2g3v2002800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2002800.1 Non Chatacterized Hit- tr|K4ALA3|K4ALA3_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si039683,67.24,0.0000000000009,no description,NAD(P)-binding
domain; Formate/glycerate dehydrogenase catalytic domain-like,NULL;
NA,gene.g42763.t1.1
(762 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76710 similar to UniRef100_Q65CJ7 Cluster: Hydroxyphe... 396 e-110
gnl|LJGI|TC75224 similar to UniRef100_Q65CJ7 Cluster: Hydroxyphe... 381 e-105
gnl|LJGI|TC71727 similar to UniRef100_Q65CJ7 Cluster: Hydroxyphe... 280 1e-74
gnl|LJGI|FS344993 similar to UniRef100_Q65CJ7 Cluster: Hydroxyph... 238 4e-62
gnl|LJGI|FS357767 similar to UniRef100_Q65CJ7 Cluster: Hydroxyph... 190 9e-48
gnl|LJGI|TC72087 similar to UniRef100_Q65CJ7 Cluster: Hydroxyphe... 163 2e-39
gnl|LJGI|BW610372 similar to UniRef100_Q65CJ7 Cluster: Hydroxyph... 100 2e-20
gnl|LJGI|TC70781 weakly similar to UniRef100_A7QKC2 Cluster: Chr... 64 1e-09
>gnl|LJGI|TC76710 similar to UniRef100_Q65CJ7 Cluster: Hydroxyphenylpyruvate
reductase; n=1; Solenostemon scutellarioides|Rep:
Hydroxyphenylpyruvate reductase - Solenostemon
scutellarioides (Coleus) (Coleus blumei), partial (52%)
Length = 603
Score = 396 bits (200), Expect = e-110
Identities = 342/389 (87%), Gaps = 3/389 (0%)
Strand = Plus / Plus
Query: 52 caagagctcgacaaccgctacaagttgtttcgcatttgggattatcattcgcagaatccc 111
|||||||| || || ||||||||| |||| |||| |||||||| | ||||||| ||
Sbjct: 131 caagagctagagaaacgctacaaggtgttccgcacgtgggattacc---cgcagaaatcc 187
Query: 112 cagctcttaagccaccacgccgcctccattcgcgccgtcgtgtgcacctcgaaaattggc 171
||||| | |||||||||||||||||||| ||||| |||||||| | ||| | |||
Sbjct: 188 cagctgctcagccaccacgccgcctccatccgcgctatcgtgtgccacgcgagagccggc 247
Query: 172 gtcgacgccaacctgatcgaggctctgccggagctggagatcgtgtcaaactacggtgtt 231
| ||||| | |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 248 gctgacgcggagctgatcgaggctctgccggagctggagatcgtgtcaaactacggcgtg 307
Query: 232 ggagtggacaagattgacttgaacaagtgcagggagaaggggattcgcgtcaccaacatc 291
|||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||| |
Sbjct: 308 ggagtggacaagattgacttgaacaaatgcagggagaagggtgttcgcgtcacctacacc 367
Query: 292 cccgacgtgttgaccgatgatgtcgccgacttggctattggcttgatcctcacactcctc 351
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 368 cccgacgtgttgaccgatgatgtcgccaacttggctattggcttgatcctcacactcctc 427
Query: 352 agaaggatctgcgagtgcgatggctacgtcagaagtgggcaatggaagaacggtgagtac 411
||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||| |||
Sbjct: 428 agaaggatctgcgagtgtgatggctacgtcagaagcgggcaatggaagaaaggtgactac 487
Query: 412 aaattgaccacacagttctctgggaaaac 440
||||||||||| ||||||||||||||
Sbjct: 488 aaattgaccactanattctctgggaaaac 516
>gnl|LJGI|TC75224 similar to UniRef100_Q65CJ7 Cluster: Hydroxyphenylpyruvate reductase;
n=1; Solenostemon scutellarioides|Rep:
Hydroxyphenylpyruvate reductase - Solenostemon
scutellarioides (Coleus) (Coleus blumei), partial (95%)
Length = 1268
Score = 381 bits (192), Expect = e-105
Identities = 279/308 (90%)
Strand = Plus / Plus
Query: 442 gaaacccatcacattataaaccggaatgtcattgatgcacttggtcccaacggttttctg 501
|||||||||||||| || |||||| | |||||||||||||||||||| || ||| ||||
Sbjct: 713 gaaacccatcacatcatcaaccgggaggtcattgatgcacttggtcctaaaggtgttcta 772
Query: 502 atcaacattggaagagggaagcatgttgatgaggcagagctggtgtctgcattggttgaa 561
|| ||||||||| |||| ||||||||||||||| |||||||||| |||||| ||||||||
Sbjct: 773 attaacattggacgaggtaagcatgttgatgagccagagctggtctctgcactggttgaa 832
Query: 562 ggtcgtttgggtggagctgggttagatgtgtttgagaatgagcctcatgttcctcaagaa 621
||||||||||||||||||||| | ||||||||||| || ||||||||||||||| ||||
Sbjct: 833 ggtcgtttgggtggagctgggctcgatgtgtttgaaaacgagcctcatgttcctgaagag 892
Query: 622 ctatttgggctagaaaatgttgtcttggtgcctcatattggaactcgcacagtagaaact 681
|||||||||||||||||||||||||||||||||||| |||||| |||| || ||||||
Sbjct: 893 ctatttgggctagaaaatgttgtcttggtgcctcatgttggaagcggcacggtggaaact 952
Query: 682 agaactgcaatggctgaccttgtccttcgaaacctggaggctcatttccttggaaaacca 741
|||||||| |||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 953 agaactgccatggctgaccttgtccttggaaacctggaggctcatttccttggtaaacca 1012
Query: 742 ctgttaac 749
||||||||
Sbjct: 1013 ctgttaac 1020
Score = 163 bits (82), Expect = 2e-39
Identities = 351/440 (79%), Gaps = 3/440 (0%)
Strand = Plus / Plus
Query: 1 atgggatcaattggggtgctccttgtgtgccaggtgccaccctacatggagcaagagctc 60
|||||||||||||| || ||||| ||||||||||| |||||| | ||||||||||||
Sbjct: 92 atgggatcaattggagtactcctcgtgtgccaggtaatgccctacctcgagcaagagctc 151
Query: 61 gacaaccgctacaagttgtttcgcatttgggattatcattcgcagaatccccagctctta 120
||||| |||| |||| | || ||| |||||||| | ||||||| |||||||| |
Sbjct: 152 gacaagcgcttcaagctcttccgcgaatgggattacc---cgcagaaggcccagctcctc 208
Query: 121 agccaccacgccgcctccattcgcgccgtcgtgtgcacctcgaaaattggcgtcgacgcc 180
| | |||||||||||||||| ||||||||||| ||| | | | |||| |||||||
Sbjct: 209 accaaccacgccgcctccatccgcgccgtcgtcggcaacgccagcgccggcgccgacgcc 268
Query: 181 aacctgatcgaggctctgccggagctggagatcgtgtcaaactacggtgttggagtggac 240
| |||| || || ||||| || |||||||||| || | || | ||||||||||||||
Sbjct: 269 gagttgattgacgcgctgcccaagttggagatcgtctcgagcttcagtgttggagtggac 328
Query: 241 aagattgacttgaacaagtgcagggagaaggggattcgcgtcaccaacatccccgacgtg 300
||||||||| | |||||||| | ||||||||||||||| || ||||| | ||| || |||
Sbjct: 329 aagattgacctcaacaagtgtaaggagaaggggattcgtgttaccaatacccctgatgtg 388
Query: 301 ttgaccgatgatgtcgccgacttggctattggcttgatcctcacactcctcagaaggatc 360
||||| |||||||| || || ||||||||||| |||||||| | | ||||| |||||
Sbjct: 389 ttgactgatgatgttgctgatttggctattgggttgatccttgcgttgctcaggaggatt 448
Query: 361 tgcgagtgcgatggctacgtcagaagtgggcaatggaagaacggtgagtacaaattgacc 420
|| ||| | ||| | || || || |||||||| |||||||| || || ||||||||||||
Sbjct: 449 tgtgagagtgatcggtatgttaggagtgggcagtggaagaaaggggactacaaattgacc 508
Query: 421 acacagttctctgggaaaac 440
|| ||||||||||||||||
Sbjct: 509 actaagttctctgggaaaac 528
>gnl|LJGI|TC71727 similar to UniRef100_Q65CJ7 Cluster: Hydroxyphenylpyruvate
reductase; n=1; Solenostemon scutellarioides|Rep:
Hydroxyphenylpyruvate reductase - Solenostemon
scutellarioides (Coleus) (Coleus blumei), partial (68%)
Length = 796
Score = 280 bits (141), Expect = 1e-74
Identities = 285/333 (85%)
Strand = Plus / Plus
Query: 110 cccagctcttaagccaccacgccgcctccattcgcgccgtcgtgtgcacctcgaaaattg 169
|||||||| | |||||||||||||||||||| |||||||||||||| | | ||| | |
Sbjct: 212 cccagctcctcagccaccacgccgcctccatccgcgccgtcgtgtgtaacacgagagccg 271
Query: 170 gcgtcgacgccaacctgatcgaggctctgccggagctggagatcgtgtcaaactacggtg 229
||| ||||| || ||||||| || |||||| | ||||||||||||| |||||||| |
Sbjct: 272 gcgcggacgcgaaattgatcgaagcactgccgaacctggagatcgtgttgaactacggcg 331
Query: 230 ttggagtggacaagattgacttgaacaagtgcagggagaaggggattcgcgtcaccaaca 289
| |||||||| | ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 332 tgggagtggatggggttgacctgaacaagtgcagggagaaggggattcgcgtcaccaaca 391
Query: 290 tccccgacgtgttgaccgatgatgtcgccgacttggctattggcttgatcctcacactcc 349
|||||||||||| |||||| |||||||| ||||| || ||||||||||||||||| |
Sbjct: 392 cccccgacgtgttaaccgatagcgtcgccgatttggccatcggcttgatcctcacacttc 451
Query: 350 tcagaaggatctgcgagtgcgatggctacgtcagaagtgggcaatggaagaacggtgagt 409
|||| || ||||||||||||||| |||| |||||||| || ||||||||||| |||||||
Sbjct: 452 tcaggagaatctgcgagtgcgatcgctatgtcagaagcggccaatggaagaaaggtgagt 511
Query: 410 acaaattgaccacacagttctctgggaaaactg 442
| ||||||||| | ||||||||||||||||||
Sbjct: 512 ataaattgacctctaagttctctgggaaaactg 544
Score = 83.8 bits (42), Expect = 1e-15
Identities = 63/70 (90%)
Strand = Plus / Plus
Query: 442 gaaacccatcacattataaaccggaatgtcattgatgcacttggtcccaacggttttctg 501
|||||| |||||||||| |||||||| |||||||||||||||||||||| || |||||
Sbjct: 727 gaaacctatcacattatcaaccggaaggtcattgatgcacttggtcccagtgggtttcta 786
Query: 502 atcaacattg 511
||||||||||
Sbjct: 787 atcaacattg 796
>gnl|LJGI|FS344993 similar to UniRef100_Q65CJ7 Cluster: Hydroxyphenylpyruvate
reductase; n=1; Solenostemon scutellarioides|Rep:
Hydroxyphenylpyruvate reductase - Solenostemon
scutellarioides (Coleus) (Coleus blumei), partial (37%)
Length = 629
Score = 238 bits (120), Expect = 4e-62
Identities = 249/292 (85%)
Strand = Plus / Plus
Query: 110 cccagctcttaagccaccacgccgcctccattcgcgccgtcgtgtgcacctcgaaaattg 169
|||||||| | |||||||||||||||||||| |||||||||||||| | | ||| | |
Sbjct: 200 cccagctcctcagccaccacgccgcctccatccgcgccgtcgtgtgtaacacgagagccg 259
Query: 170 gcgtcgacgccaacctgatcgaggctctgccggagctggagatcgtgtcaaactacggtg 229
||| ||||| || ||||||| || |||||| | ||||||||||||| |||||||| |
Sbjct: 260 gcgcggacgcgaaattgatcgaagcactgccgaacctggagatcgtgttgaactacggcg 319
Query: 230 ttggagtggacaagattgacttgaacaagtgcagggagaaggggattcgcgtcaccaaca 289
| |||||||| | ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tgggagtggatggggttgacctgaacaagtgcagggagaaggggattcgcgtcaccaaca 379
Query: 290 tccccgacgtgttgaccgatgatgtcgccgacttggctattggcttgatcctcacactcc 349
|||||||||||| |||||| |||||||| ||||| || ||||||||||||||||| |
Sbjct: 380 cccccgacgtgttaaccgatagcgtcgccgatttggccatcggcttgatcctcacacttc 439
Query: 350 tcagaaggatctgcgagtgcgatggctacgtcagaagtgggcaatggaagaa 401
|||| || ||||||||||||||| |||| |||||||| || |||||||||||
Sbjct: 440 tcaggagaatctgcgagtgcgatcgctatgtcagaagcggccaatggaagaa 491
>gnl|LJGI|FS357767 similar to UniRef100_Q65CJ7 Cluster: Hydroxyphenylpyruvate
reductase; n=1; Solenostemon scutellarioides|Rep:
Hydroxyphenylpyruvate reductase - Solenostemon
scutellarioides (Coleus) (Coleus blumei), partial (18%)
Length = 312
Score = 190 bits (96), Expect = 9e-48
Identities = 150/168 (89%)
Strand = Plus / Minus
Query: 582 gttagatgtgtttgagaatgagcctcatgttcctcaagaactatttgggctagaaaatgt 641
||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||
Sbjct: 312 gttagatgtgtttgagaatgagcctcatgttcctcaagagctgtttgggctggaaaatgt 253
Query: 642 tgtcttggtgcctcatattggaactcgcacagtagaaactagaactgcaatggctgacct 701
||| |||||||||||| ||||| | |||||||||||||| ||| ||| |||||||||||
Sbjct: 252 tgtgttggtgcctcatgttggaccaggcacagtagaaactcgaattgctatggctgacct 193
Query: 702 tgtccttcgaaacctggaggctcatttccttggaaaaccactgttaac 749
||| ||| |||| | ||||||||||||| ||| ||||||||||||||
Sbjct: 192 tgtacttggaaatttagaggctcatttccatgggaaaccactgttaac 145
>gnl|LJGI|TC72087 similar to UniRef100_Q65CJ7 Cluster: Hydroxyphenylpyruvate
reductase; n=1; Solenostemon scutellarioides|Rep:
Hydroxyphenylpyruvate reductase - Solenostemon
scutellarioides (Coleus) (Coleus blumei), partial (61%)
Length = 745
Score = 163 bits (82), Expect = 2e-39
Identities = 351/440 (79%), Gaps = 3/440 (0%)
Strand = Plus / Plus
Query: 1 atgggatcaattggggtgctccttgtgtgccaggtgccaccctacatggagcaagagctc 60
|||||||||||||| || ||||| ||||||||||| |||||| | ||||||||||||
Sbjct: 127 atgggatcaattggagtactcctcgtgtgccaggtaatgccctacctcgagcaagagctc 186
Query: 61 gacaaccgctacaagttgtttcgcatttgggattatcattcgcagaatccccagctctta 120
||||| |||| |||| | || ||| |||||||| | ||||||| |||||||| |
Sbjct: 187 gacaagcgcttcaagctcttccgcgaatgggattacc---cgcagaaggcccagctcctc 243
Query: 121 agccaccacgccgcctccattcgcgccgtcgtgtgcacctcgaaaattggcgtcgacgcc 180
| | |||||||||||||||| ||||||||||| ||| | | | |||| |||||||
Sbjct: 244 accaaccacgccgcctccatccgcgccgtcgtcggcaacgccagcgccggcgccgacgcc 303
Query: 181 aacctgatcgaggctctgccggagctggagatcgtgtcaaactacggtgttggagtggac 240
| |||| || || ||||| || |||||||||| || | || | ||||||||||||||
Sbjct: 304 gagttgattgacgcgctgcccaagttggagatcgtctcgagcttcagtgttggagtggac 363
Query: 241 aagattgacttgaacaagtgcagggagaaggggattcgcgtcaccaacatccccgacgtg 300
||||||||| | |||||||| | ||||||||||||||| || ||||| | ||| || |||
Sbjct: 364 aagattgacctcaacaagtgtaaggagaaggggattcgtgttaccaatacccctgatgtg 423
Query: 301 ttgaccgatgatgtcgccgacttggctattggcttgatcctcacactcctcagaaggatc 360
||||| |||||||| || || ||||||||||| |||||||| | | ||||| |||||
Sbjct: 424 ttgactgatgatgttgctgatttggctattgggttgatccttgcgttgctcaggaggatt 483
Query: 361 tgcgagtgcgatggctacgtcagaagtgggcaatggaagaacggtgagtacaaattgacc 420
|| ||| | ||| | || || || |||||||| |||||||| || || ||||||||||||
Sbjct: 484 tgtgagagtgatcggtatgttaggagtgggcagtggaagaaaggggactacaaattgacc 543
Query: 421 acacagttctctgggaaaac 440
|| ||||||||||||||||
Sbjct: 544 actaagttctctgggaaaac 563
>gnl|LJGI|BW610372 similar to UniRef100_Q65CJ7 Cluster: Hydroxyphenylpyruvate
reductase; n=1; Solenostemon scutellarioides|Rep:
Hydroxyphenylpyruvate reductase - Solenostemon
scutellarioides (Coleus) (Coleus blumei), partial (27%)
Length = 459
Score = 99.6 bits (50), Expect = 2e-20
Identities = 241/304 (79%), Gaps = 3/304 (0%)
Strand = Plus / Plus
Query: 1 atgggatcaattggggtgctccttgtgtgccaggtgccaccctacatggagcaagagctc 60
|||||||||||||| || ||||| ||||||||||| |||||| | ||||||||||||
Sbjct: 159 atgggatcaattggagtactcctcgtgtgccaggtaatgccctacctcgagcaagagctc 218
Query: 61 gacaaccgctacaagttgtttcgcatttgggattatcattcgcagaatccccagctctta 120
||||| |||| |||| | || ||| |||||||| | ||||||| |||||||| |
Sbjct: 219 gacaagcgcttcaagctcttccgcgaatgggattacc---cgcagaaggcccagctcctc 275
Query: 121 agccaccacgccgcctccattcgcgccgtcgtgtgcacctcgaaaattggcgtcgacgcc 180
| | |||||||||||||||| ||||||||||| ||| | | | |||| |||||||
Sbjct: 276 accaaccacgccgcctccatccgcgccgtcgtcggcaacgccagcgccggcgccgacgcc 335
Query: 181 aacctgatcgaggctctgccggagctggagatcgtgtcaaactacggtgttggagtggac 240
| |||| || || ||||| || |||||||||| || | || | ||||||||||||||
Sbjct: 336 gagttgattgacgcgctgcccaagttggagatcgtctcgagcttcagtgttggagtggac 395
Query: 241 aagattgacttgaacaagtgcagggagaaggggattcgcgtcaccaacatccccgacgtg 300
||||||||| | |||||||| | ||||||||||||||| || ||||| | ||| || |||
Sbjct: 396 aagattgacctcaacaagtgtaaggagaaggggattcgtgttaccaatacccctgatgtg 455
Query: 301 ttga 304
||||
Sbjct: 456 ttga 459
>gnl|LJGI|TC70781 weakly similar to UniRef100_A7QKC2 Cluster: Chromosome chr2
scaffold_112, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_112, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (55%)
Length = 1314
Score = 63.9 bits (32), Expect = 1e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 577 gctgggttagatgtgtttgagaatgagcctcatgttcctcaaga 620
||||| || |||||||||||||| ||||||||||||||||||||
Sbjct: 769 gctggtttggatgtgtttgagaacgagcctcatgttcctcaaga 812