Miyakogusa Predicted Gene
- Lj2g3v2002790.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2002790.2 CUFF.38398.2
(1266 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO023699 similar to UniRef100_A7QK92 Cluster: Chromosom... 234 1e-60
gnl|LJGI|BP035884 similar to UniRef100_O49665 Cluster: Predicted... 155 8e-37
gnl|LJGI|TC79582 weakly similar to UniRef100_O49665 Cluster: Pre... 145 8e-34
gnl|LJGI|DC598547 weakly similar to UniRef100_O49665 Cluster: Pr... 131 1e-29
>gnl|LJGI|GO023699 similar to UniRef100_A7QK92 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 650
Score = 234 bits (118), Expect = 1e-60
Identities = 280/334 (83%)
Strand = Plus / Plus
Query: 255 cgacccgatccagacggtgaagcaaaattcagtgcctattttggagattctgaagcaatc 314
||||| || ||||||| |||||||||||| ||| || || |||||||||| ||||||||
Sbjct: 317 cgacctgacccagacgctgaagcaaaattgggtgtcttttctggagattctaaagcaatc 376
Query: 315 aaattcatttctgcctcatgtactcattgctactacactgctagctctgatcttcccacc 374
||||||| |||||||| ||||| | || ||| |||||| ||||||| || |||| |
Sbjct: 377 aaattcacttctgccttatgtagcccttactagtacactcatagctctagtcatcccgca 436
Query: 375 ttctttaacatggtttaccaccagatactatgcacctgcacttgggtttttgatgtttgc 434
||||| |||||||||||||||||| ||||||| |||||||| |||||||||||||||||
Sbjct: 437 atcttttacatggtttaccaccagacactatgctcctgcactggggtttttgatgtttgc 496
Query: 435 tgtaggggttaattcaagtgaaaaggactttcttgaggcatttaacaggccagcagaaat 494
|| ||||||||||||| ||||||||||| ||||| ||| |||| |||||| ||||| |
Sbjct: 497 agttggggttaattcaaaggaaaaggacttccttgacgcacttaaaaggccaacagaact 556
Query: 495 tgtgactggttatgttggccagtttgttgtgaaacctcttcttggatatctgttctattt 554
| | || | ||| | | |||||||| || |||| |||||||||||||||||| | | |
Sbjct: 557 tctcacagcttacgcttgccagtttattttgaagcctcttcttggatatctgctatgcat 616
Query: 555 aatttcagtaaatgtatttggtctaccaacagct 588
||||||||| ||||||||||||||||||||||||
Sbjct: 617 aatttcagtgaatgtatttggtctaccaacagct 650
>gnl|LJGI|BP035884 similar to UniRef100_O49665 Cluster: Predicted protein; n=1;
Arabidopsis thaliana|Rep: Predicted protein - Arabidopsis
thaliana, partial (3%)
Length = 510
Score = 155 bits (78), Expect = 8e-37
Identities = 82/84 (97%)
Strand = Plus / Minus
Query: 1183 actgcaatgatgtcgttgacggggttcggtcttgttctgatttggagcaaaagaggaaag 1242
||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 390 actgcnatgatgtcgttgacggggttcggtcttgttctgatttggagcnaaagaggaaag 331
Query: 1243 ggcgagacaaaacaaagcacctga 1266
||||||||||||||||||||||||
Sbjct: 330 ggcgagacaaaacaaagcacctga 307
>gnl|LJGI|TC79582 weakly similar to UniRef100_O49665 Cluster: Predicted protein; n=1;
Arabidopsis thaliana|Rep: Predicted protein - Arabidopsis
thaliana (Mouse-ear cress), partial (16%)
Length = 474
Score = 145 bits (73), Expect = 8e-34
Identities = 140/161 (86%), Gaps = 1/161 (0%)
Strand = Plus / Plus
Query: 998 ttcatttgtcatcttttatagctggttatgtcctaagtggatttatctttcatgatgctc 1057
|||||||| ||||||||||| ||||||| || |||||||||||| ||| | |||| |||
Sbjct: 1 ttcatttgacatcttttataattggttatatcataagtggatttaccttccgtgattctc 60
Query: 1058 ctgatgtgaaagcattgcagcgaacaatttccttcgagacaggaatgcaaagtagccttc 1117
|||||| ||| || |||||||||| ||||| || |||| ||||||||||||||||| |
Sbjct: 61 ctgatgcgaagccactgcagcgaacgatttcgtttgagatgggaatgcaaagtagcctcc 120
Query: 1118 ttg-ccctggctctcgctaataagttctttgaagatccagt 1157
||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 121 ttgcccctggctcttgctaataagttctttgaagatccagt 161
>gnl|LJGI|DC598547 weakly similar to UniRef100_O49665 Cluster: Predicted protein; n=1;
Arabidopsis thaliana|Rep: Predicted protein - Arabidopsis
thaliana (Mouse-ear cress), partial (17%)
Length = 469
Score = 131 bits (66), Expect = 1e-29
Identities = 219/270 (81%)
Strand = Plus / Plus
Query: 997 tttcatttgtcatcttttatagctggttatgtcctaagtggatttatctttcatgatgct 1056
||||||||| ||||||||||| ||||||| || |||||||||||| ||| | |||| ||
Sbjct: 1 tttcatttgacatcttttataattggttatatcataagtggatttaccttccgtgattct 60
Query: 1057 cctgatgtgaaagcattgcagcgaacaatttccttcgagacaggaatgcaaagtagcctt 1116
||||||| ||| || |||||||||||||||| || |||| |||||||||||||||||
Sbjct: 61 cctgatgcgaagccactgcagcgaacaatttcgtttgagatgggaatgcaaagtagcctc 120
Query: 1117 cttgccctggctctcgctaataagttctttgaagatccagtagtgagcatacctcctgcg 1176
||||||||||||| | ||||||||| ||||||||||| || | || ||| ||||
Sbjct: 121 cttgccctggctcgggggggtaagttcttcgaagatccagttgtcggtatcccttctgca 180
Query: 1177 atttctactgcaatgatgtcgttgacggggttcggtcttgttctgatttggagcaaaaga 1236
|||||| | | | ||||| |||| ||| ||| ||||||||||||||| |||| ||
Sbjct: 181 atttcttcgccgcttatgtctttgatgggattctcccttgttctgatttggtccaaagga 240
Query: 1237 ggaaagggcgagacaaaacaaagcacctga 1266
||||| || |||||||||| |||||||||
Sbjct: 241 agaaagagcaagacaaaacacagcacctga 270