Miyakogusa Predicted Gene
- Lj2g3v2002790.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2002790.1 CUFF.38398.1
(1266 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC598547 weakly similar to UniRef100_O49665 Cluster: Pr... 488 e-137
gnl|LJGI|GO023699 similar to UniRef100_A7QK92 Cluster: Chromosom... 456 e-127
gnl|LJGI|TC79582 weakly similar to UniRef100_O49665 Cluster: Pre... 436 e-121
>gnl|LJGI|DC598547 weakly similar to UniRef100_O49665 Cluster: Predicted protein; n=1;
Arabidopsis thaliana|Rep: Predicted protein - Arabidopsis
thaliana (Mouse-ear cress), partial (17%)
Length = 469
Score = 488 bits (246), Expect = e-137
Identities = 264/270 (97%)
Strand = Plus / Plus
Query: 997 tttcatttgacatcttttataattggttatatcataagtggatttaccttccgtgattct 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tttcatttgacatcttttataattggttatatcataagtggatttaccttccgtgattct 60
Query: 1057 cctgatgcgaagccactgcagcgaacaatttcgtttgagatgggaatgcaaagtagcctc 1116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cctgatgcgaagccactgcagcgaacaatttcgtttgagatgggaatgcaaagtagcctc 120
Query: 1117 cttgccctggctcttgctaataagttcttcgaagatccagttgtcggtatcccttctgca 1176
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cttgccctggctcgggggggtaagttcttcgaagatccagttgtcggtatcccttctgca 180
Query: 1177 atttcttcgccgcttatgtctttgatgggattctcccttgttctgatttggtccaaagga 1236
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atttcttcgccgcttatgtctttgatgggattctcccttgttctgatttggtccaaagga 240
Query: 1237 agaaagagcaagacaaaacacagcacctga 1266
||||||||||||||||||||||||||||||
Sbjct: 241 agaaagagcaagacaaaacacagcacctga 270
>gnl|LJGI|GO023699 similar to UniRef100_A7QK92 Cluster: Chromosome chr2 scaffold_112,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_112, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 650
Score = 456 bits (230), Expect = e-127
Identities = 308/334 (92%)
Strand = Plus / Plus
Query: 255 cgacccgatccagacggtgaagcaaaattcagtgcctattttggagattctgaagcaatc 314
||||| || ||||||| |||||||||||| ||| || || |||||||||| ||||||||
Sbjct: 317 cgacctgacccagacgctgaagcaaaattgggtgtcttttctggagattctaaagcaatc 376
Query: 315 aaattcatttctgcctcatgtactcattgctactacactgctagctctgatcttcccacc 374
||||||| |||||||| ||||| | || ||| |||||| ||||||| || |||| |
Sbjct: 377 aaattcacttctgccttatgtagcccttactagtacactcatagctctagtcatcccgca 436
Query: 375 ttctttaacatggtttaccaccagacactatgctcctgcactggggtttttgatgtttgc 434
||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atcttttacatggtttaccaccagacactatgctcctgcactggggtttttgatgtttgc 496
Query: 435 agttggggttaattcaaaggaaaaggacttccttgacgcatttaaaaggccaacagaact 494
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 497 agttggggttaattcaaaggaaaaggacttccttgacgcacttaaaaggccaacagaact 556
Query: 495 tctcacagcttacgcttgccagtttattttgaagcctcttcttggatatctgctatgcat 554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tctcacagcttacgcttgccagtttattttgaagcctcttcttggatatctgctatgcat 616
Query: 555 aatttcagtgaatgtatttggtctaccaacagct 588
||||||||||||||||||||||||||||||||||
Sbjct: 617 aatttcagtgaatgtatttggtctaccaacagct 650
>gnl|LJGI|TC79582 weakly similar to UniRef100_O49665 Cluster: Predicted protein; n=1;
Arabidopsis thaliana|Rep: Predicted protein - Arabidopsis
thaliana (Mouse-ear cress), partial (16%)
Length = 474
Score = 436 bits (220), Expect = e-121
Identities = 263/272 (96%), Gaps = 4/272 (1%)
Strand = Plus / Plus
Query: 998 ttcatttgacatcttttataattggttatatcataagtggatttaccttccgtgattctc 1057
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ttcatttgacatcttttataattggttatatcataagtggatttaccttccgtgattctc 60
Query: 1058 ctgatgcgaagccactgcagcgaacaatttcgtttgagatgggaatgcaaagtagcctcc 1117
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgatgcgaagccactgcagcgaacgatttcgtttgagatgggaatgcaaagtagcctcc 120
Query: 1118 ttg-ccctggctcttgctaataagttcttcgaagatccagttgtcggtatcccttctgca 1176
||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 121 ttgcccctggctcttgctaataagttctttgaagatccagttgtcggtatcccttctgcc 180
Query: 1177 atttcttcgccgcttatgtctttgatgggattctcccttg-ttctgatttggtcca-aag 1234
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 181 atttcttcgccgcttatgtctttgatgggattctcccttgcttctgatttggtccagaag 240
Query: 1235 gaagaaagagca-agacaaaacacagcacctg 1265
|||||||||||| |||| |||| |||||||||
Sbjct: 241 gaagaaagagcacagaccaaacccagcacctg 272