Miyakogusa Predicted Gene
- Lj2g3v2002620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2002620.1 Non Chatacterized Hit- tr|I1LGL0|I1LGL0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51901
PE,75.89,0,seg,NULL; Ribonuclease H-like,Ribonuclease H-like
domain,CUFF.38369.1
(2358 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78414 similar to UniRef100_A7QYT0 Cluster: Chromosome... 2002 0.0
gnl|LJGI|TC63825 similar to UniRef100_A7QYT0 Cluster: Chromosome... 1059 0.0
gnl|LJGI|BI418008 similar to UniRef100_A7QYT0 Cluster: Chromosom... 168 1e-40
gnl|LJGI|TC60823 similar to UniRef100_A7QGS9 Cluster: Chromosome... 96 1e-18
gnl|LJGI|TC68998 similar to UniRef100_A7QGS9 Cluster: Chromosome... 82 2e-14
gnl|LJGI|TC66487 similar to UniRef100_A7QGS9 Cluster: Chromosome... 72 2e-11
gnl|LJGI|TC70088 similar to UniRef100_A7QGS9 Cluster: Chromosome... 70 7e-11
>gnl|LJGI|TC78414 similar to UniRef100_A7QYT0 Cluster: Chromosome undetermined
scaffold_254, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_254, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(39%)
Length = 1764
Score = 2002 bits (1010), Expect = 0.0
Identities = 1029/1034 (99%), Gaps = 1/1034 (0%)
Strand = Plus / Plus
Query: 1326 catcaattacaaatctcaactagttcggaatagttttcacaagtatcaaatgcaagagca 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catcaattacaaatctcaactagttcggaatagttttcacaagtatcaaatgcaagagca 60
Query: 1386 cgggcacgcgtggctaatcagaatgcactcttttgaggacttcaactttggttctgtgta 1445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 cgggcacgcgtggctaatcagaatgcactcttttgaggacttcaactttggttctgtgta 120
Query: 1446 tacaatgatggaggacattttgagctcagctcgtgctttagagcatgttctgcttgatga 1505
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tacaatgatgggggacattttgagctcagctcgtgctttagagcatgttctgcttgatga 180
Query: 1506 accgttcaagattgcttcgattaaagacgcgagcgcgagagaagttggggatataattcg 1565
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 181 accgttcaagattgcttcgattaaatacgcgagcgcgagagaagttggggatataattcg 240
Query: 1566 agacgtggggttctggaatgatcttgaagcagcccactcgttgattaaactggtgaagga 1625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agacgtggggttctggaatgatcttgaagcagcccactcgttgattaaactggtgaagga 300
Query: 1626 catggtttgtgagattgagacagaaaggccacttgttggacaatgtcttcccttgtggga 1685
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 catggtttgtgagattgagacagaaaggccacttgttggacaatgtcttcccttgtggga 360
Query: 1686 tgaattgagagcaaaagtgaagatttggtgctccaaatttcaattttcagaagcattgtt 1745
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgaattgagagcaaaagtgaagatttggtgctccaaatttcaattttcagaagcattgtt 420
Query: 1746 ggagaaagttattgagaaacggttcaggaaaaactaccaccctgcatgggctgctgcata 1805
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ggagaaagttattgagaaacggttcaggaaaaactaccaccctgcatgggctgctgcata 480
Query: 1806 cattcttgacccactttatctggtgagggacaccagcggcaagtaccttccgccatacaa 1865
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cattcttgacccactttatctggtgagggacaccagcggcaagtaccttccgccatacaa 540
Query: 1866 gtttttggcgccggagcaggagaaggacgtggacaagctcataacgaggcttgtctcacg 1925
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gtttttggcgccggagcaggagaaggacgtggacaagctcataacgaggcttgtctcacg 600
Query: 1926 agatgaggcgcacgttgtgttaatggagctcatgaaatggagaacacaagggcttgatcc 1985
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agatgaggcgcacgttgtgttaatggagctcatgaaatggagaacacaagggcttgatcc 660
Query: 1986 tgtgtacgcgcgagccgtgcagatgaaggagagagatcctgtaactggaaagatgaggat 2045
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tgtgtacgcgcgagccgtgcagatgaaggagagagatcctgtaactggaaagatgaggat 720
Query: 2046 tgtgaatccacaaag-cagtaggcttgtttgggagacttatttaacagaattcaggtcct 2104
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 tgtgaatccacaaagcccgtaggcttgtttgggagacttatttaacagaattcaggtcct 780
Query: 2105 tagggagggttgcagtgaggttaatattcctacatgcaacctcgcgtggcttcaaatgca 2164
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 781 tagggagggttgcagtgaggttgatattcctacatgcaacctcgcgtggcttcaaatgca 840
Query: 2165 attggcctttgcggttaggacactccagggtagcactggagagggcgcagaagttgatat 2224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 attggcctttgcggttaggacactccagggtagcactggagagggcgcagaagttgatat 900
Query: 2225 ttatcgcagctcattcgaaattggaaaggagggatttttccagtgatgaagataaggatg 2284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 ttatcgcagctcattcgaaattggaaaggagggatttttccagtgatgaagataaggatg 960
Query: 2285 cagagctgtttgccttggtcaatggtgaggatgatgtgttgaatgaggtctttttggata 2344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 961 cagagctgtttgccttggtcaatggtgaggatgatgtgttgaatgaggtctttttggata 1020
Query: 2345 catcctcagtgtaa 2358
||||||||||||||
Sbjct: 1021 catcctcagtgtaa 1034
>gnl|LJGI|TC63825 similar to UniRef100_A7QYT0 Cluster: Chromosome undetermined
scaffold_254, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_254,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (13%)
Length = 782
Score = 1059 bits (534), Expect = 0.0
Identities = 534/534 (100%)
Strand = Plus / Plus
Query: 1 atgcttcttcattggaggccagacggcaacgaagaagaacaagaacatgtaatcaaacaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 atgcttcttcattggaggccagacggcaacgaagaagaacaagaacatgtaatcaaacaa 308
Query: 61 acacaagaagagtttccaatttccatcaccagtcacactcataactctgtttctgcttct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 acacaagaagagtttccaatttccatcaccagtcacactcataactctgtttctgcttct 368
Query: 121 tctctacttgcaatggcggctactgcaccttctgctgactcagcttcagccgatgaactc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tctctacttgcaatggcggctactgcaccttctgctgactcagcttcagccgatgaactc 428
Query: 181 actgtaaaagctgtacagaagcgctacgatggtttggtcacggttcgaaccaaagctgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 actgtaaaagctgtacagaagcgctacgatggtttggtcacggttcgaaccaaagctgtg 488
Query: 241 aagggtaaaggggcttggtactgggcgcaccttgaacccatgctggttcacaacgccgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aagggtaaaggggcttggtactgggcgcaccttgaacccatgctggttcacaacgccgat 548
Query: 301 acagggctacccaaagcggtgaagctcaagtgctctctctgcgacgccgtattctccgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 acagggctacccaaagcggtgaagctcaagtgctctctctgcgacgccgtattctccgct 608
Query: 361 tccaacccctctcgcaccgcctctgagcatcttaagcgcggaacctgccccaatttccac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tccaacccctctcgcaccgcctctgagcatcttaagcgcggaacctgccccaatttccac 668
Query: 421 tccgcagccaaacccatatcctctgtatctcctggcggcgctactgtctcgtcgcctcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 tccgcagccaaacccatatcctctgtatctcctggcggcgctactgtctcgtcgcctcct 728
Query: 481 tctccggcgaaccacagtcagcggaagagaacctgctctgcgggccctacctca 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 tctccggcgaaccacagtcagcggaagagaacctgctctgcgggccctacctca 782
>gnl|LJGI|BI418008 similar to UniRef100_A7QYT0 Cluster: Chromosome undetermined
scaffold_254, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_254, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(17%)
Length = 409
Score = 168 bits (85), Expect = 1e-40
Identities = 313/389 (80%)
Strand = Plus / Plus
Query: 1636 gagattgagacagaaaggccacttgttggacaatgtcttcccttgtgggatgaattgaga 1695
|||||||||||||||||||| | ||||| ||||| ||| | ||| | || ||||||
Sbjct: 17 gagattgagacagaaaggcccttagttgggcaatgccttataatttggaacgagttgaga 76
Query: 1696 gcaaaagtgaagatttggtgctccaaatttcaattttcagaagcattgttggagaaagtt 1755
||||||||||| ||||||||||||||| ||| || |||||| | |||| ||| |
Sbjct: 77 tcaaaagtgaaggattggtgctccaaattccaaattgcagaaggagcagtggataaattg 136
Query: 1756 attgagaaacggttcaggaaaaactaccaccctgcatgggctgctgcatacattcttgac 1815
||||| ||| |||||| ||| |||||||||||||| |||||||| ||||||||||| |||
Sbjct: 137 attgaaaaaaggttcaagaagaactaccaccctgcttgggctgcagcatacattctagac 196
Query: 1816 ccactttatctggtgagggacaccagcggcaagtaccttccgccatacaagtttttggcg 1875
|| |||||||| | || ||||| ||||| | |||||||||||||| ||||| ||| |
Sbjct: 197 cctctttatctaataagagacacaagcggtatgtaccttccgccattcaagtacttgact 256
Query: 1876 ccggagcaggagaaggacgtggacaagctcataacgaggcttgtctcacgagatgaggcg 1935
||||| |||||||| || || |||| |||| |||| |||||||| || |||| || ||
Sbjct: 257 ccggaacaggagaaagatgtcgacaggctcttaacaaggcttgtttcgagagacgaagca 316
Query: 1936 cacgttgtgttaatggagctcatgaaatggagaacacaagggcttgatcctgtgtacgcg 1995
||| ||| | ||||| |||||||| ||||||||| ||||||||||||| || || ||
Sbjct: 317 cacattgctctgatggaactcatgaagtggagaacagaagggcttgatccagtttatgct 376
Query: 1996 cgagccgtgcagatgaaggagagagatcc 2024
| ||| || |||||||||||||| |||||
Sbjct: 377 caagctgttcagatgaaggagagggatcc 405
>gnl|LJGI|TC60823 similar to UniRef100_A7QGS9 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 725
Score = 95.6 bits (48), Expect = 1e-18
Identities = 174/216 (80%)
Strand = Plus / Plus
Query: 202 cgctacgatggtttggtcacggttcgaaccaaagctgtgaagggtaaaggggcttggtac 261
|||||||| ||| | ||||| ||||| ||||| || | |||||||||||||| ||||||
Sbjct: 444 cgctacgagggtctcgtcactgttcgtaccaaggcgatcaagggtaaaggggcatggtac 503
Query: 262 tgggcgcaccttgaacccatgctggttcacaacgccgatacagggctacccaaagcggtg 321
||||||||| | |||||| | ||||||| || |||| || || | |||||| |||||
Sbjct: 504 tgggcgcacttggaaccccttctggttcgaaatcccgacacgggcatgcccaaatcggtg 563
Query: 322 aagctcaagtgctctctctgcgacgccgtattctccgcttccaacccctctcgcaccgcc 381
|||||||||||||| ||||| ||| | || ||||| ||||| ||||| || | |||||
Sbjct: 564 aagctcaagtgctccctctgtgactctgttttctctgcttcaaacccttccagaaccgct 623
Query: 382 tctgagcatcttaagcgcggaacctgccccaatttc 417
|||||||| | ||||| ||||| ||| ||||||||
Sbjct: 624 tctgagcacttgaagcgtggaacttgcgccaatttc 659
>gnl|LJGI|TC68998 similar to UniRef100_A7QGS9 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 784
Score = 81.8 bits (41), Expect = 2e-14
Identities = 182/229 (79%)
Strand = Plus / Plus
Query: 1757 ttgagaaacggttcaggaaaaactaccaccctgcatgggctgctgcatacattcttgacc 1816
|||| ||| ||||||| |||||||| |||||||| ||| | || |||| |||||||| |
Sbjct: 521 ttgaaaaaaggttcagaaaaaactatcaccctgcttggtcagcagcatttattcttgatc 580
Query: 1817 cactttatctggtgagggacaccagcggcaagtaccttccgccatacaagtttttggcgc 1876
||||||| || | | ||||| || || ||||||||||| |||| ||||| |||| | |
Sbjct: 581 cactttacttgattaaagacacaagtggaaagtaccttcctccattcaagtgtttgacac 640
Query: 1877 cggagcaggagaaggacgtggacaagctcataacgaggcttgtctcacgagatgaggcgc 1936
||||||||||| || ||||| ||| | | || |||| | |||| |||| || || |
Sbjct: 641 gcgagcaggagaaagatgtggataagttattgactcggctagcctcaagagaagaagctc 700
Query: 1937 acgttgtgttaatggagctcatgaaatggagaacacaagggcttgatcc 1985
| |||||||| |||||||| |||||||||||| || |||||||||||||
Sbjct: 701 atgttgtgttgatggagctaatgaaatggagatcagaagggcttgatcc 749
>gnl|LJGI|TC66487 similar to UniRef100_A7QGS9 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 699
Score = 71.9 bits (36), Expect = 2e-11
Identities = 114/140 (81%)
Strand = Plus / Plus
Query: 202 cgctacgatggtttggtcacggttcgaaccaaagctgtgaagggtaaaggggcttggtac 261
|||||||| ||| | ||||| ||||| ||||| || | |||||||||||||| ||||||
Sbjct: 541 cgctacgagggtctcgtcactgttcgtaccaaggcgatcaagggtaaaggggcatggtac 600
Query: 262 tgggcgcaccttgaacccatgctggttcacaacgccgatacagggctacccaaagcggtg 321
||||||||| | |||||| | ||||||| || | || || || | |||||| |||||
Sbjct: 601 tgggcgcacttggaaccccttctggttcgaaatccagacacgggcatgcccaaatcggtg 660
Query: 322 aagctcaagtgctctctctg 341
|||||||||||||| |||||
Sbjct: 661 aagctcaagtgctccctctg 680
>gnl|LJGI|TC70088 similar to UniRef100_A7QGS9 Cluster: Chromosome chr16 scaffold_94,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_94, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 624
Score = 69.9 bits (35), Expect = 7e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 2248 gaaaggagggatttttccagtgatgaagataaggatgcagagctgtttgcc 2298
|||||||| |||||||||||||| ||||| ||||||||||| |||||||||
Sbjct: 247 gaaaggagagatttttccagtgaggaagagaaggatgcagaactgtttgcc 297