Miyakogusa Predicted Gene

Lj2g3v2002610.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2002610.1 tr|G7KG67|G7KG67_MEDTR CPD photolyase OS=Medicago
truncatula GN=MTR_5g011780 PE=4 SV=1,80.77,0,FAD_binding_7,DNA
photolyase, FAD-binding/Cryptochrome, C-terminal; DNA_photolyase,DNA
photolyase, N,CUFF.38373.1
         (1488 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BW630454 similar to UniRef100_Q9AVI6 Cluster: CPD photo...   886   0.0  

>gnl|LJGI|BW630454 similar to UniRef100_Q9AVI6 Cluster: CPD photolyase; n=1; Cucumis
           sativus|Rep: CPD photolyase - Cucumis sativus
           (Cucumber), partial (24%)
          Length = 479

 Score =  886 bits (447), Expect = 0.0
 Identities = 447/447 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttccgcaccgtcgccaatgtcggtcaatccgggtcgcattcggaccctgaaagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 33  atggcttccgcaccgtcgccaatgtcggtcaatccgggtcgcattcggaccctgaaagaa 92

                                                                       
Query: 61  gggtcgccccgttccaacggcgaatcgggtcccgtcgtgtactggatgttcagagatcaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 93  gggtcgccccgttccaacggcgaatcgggtcccgtcgtgtactggatgttcagagatcaa 152

                                                                       
Query: 121 cgggttcgagacaactgggctcttatccacgccgttcaccaagccaacaaagccaacgtt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 cgggttcgagacaactgggctcttatccacgccgttcaccaagccaacaaagccaacgtt 212

                                                                       
Query: 181 cccgtcgccgtcgttttcaatctcttcgatcactttctgggtgcaaagtctcgtcatcta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 cccgtcgccgtcgttttcaatctcttcgatcactttctgggtgcaaagtctcgtcatcta 272

                                                                       
Query: 241 gggttcatgctcaggggtttacgccaattgtgtcaccaacttcaacacactcttcaaatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gggttcatgctcaggggtttacgccaattgtgtcaccaacttcaacacactcttcaaatc 332

                                                                       
Query: 301 ccctttttcttgttccggggtgaagcagaggagactgtgtcgaaatttgttagggaatgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 ccctttttcttgttccggggtgaagcagaggagactgtgtcgaaatttgttagggaatgc 392

                                                                       
Query: 361 ggggcttcattgttggtgacggacatgtcacccttgcgtgaagttcggaggtgcaaatcg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 ggggcttcattgttggtgacggacatgtcacccttgcgtgaagttcggaggtgcaaatcg 452

                                      
Query: 421 gagatttgtgagagggttggtgattcg 447
           |||||||||||||||||||||||||||
Sbjct: 453 gagatttgtgagagggttggtgattcg 479