Miyakogusa Predicted Gene

Lj2g3v2002220.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v2002220.1 gene.g42713.t1.1
         (1996 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC81515                                                      359   4e-98
gnl|LJGI|BP057320                                                      76   9e-13
gnl|LJGI|TC80541                                                       72   1e-11
gnl|LJGI|TC76376 similar to UniRef100_Q1JX87 Cluster: Cytochrome...    72   1e-11
gnl|LJGI|TC63699                                                       72   1e-11

>gnl|LJGI|TC81515 
          Length = 474

 Score =  359 bits (181), Expect = 4e-98
 Identities = 209/219 (95%)
 Strand = Plus / Plus

                                                                        
Query: 1778 gagcacctttggcaatagggcgtggcattgggacttgtttctctgaaatggaattagaca 1837
            ||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||| 
Sbjct: 1    gagcacctttgncaataggacgtgncattgggacttgtttctctgaaatggaattagacc 60

                                                                        
Query: 1838 atacatatttagtttgttccatgccagagttcacttcacagactttgtactcctttcatg 1897
            ||||||||||| ||||||||||| ||||||||||||| |||||| |||||||||||||||
Sbjct: 61   atacatatttactttgttccatgtcagagttcacttcccagactctgtactcctttcatg 120

                                                                        
Query: 1898 ggctttggcatagcactacacttcttgagtggattcttattattgcttggatagtctatt 1957
            ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ggctttgccatagcactacccttcttgagtggattcttattattgcttggatagtctatt 180

                                                   
Query: 1958 tctcatccttgaggacaaggatgttttcaaggggatggt 1996
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 181  tctcatccttgaggacaaggatgttttcaaggggatggt 219


>gnl|LJGI|BP057320 
          Length = 420

 Score = 75.8 bits (38), Expect = 9e-13
 Identities = 38/38 (100%)
 Strand = Plus / Minus

                                                  
Query: 1959 ctcatccttgaggacaaggatgttttcaaggggatggt 1996
            ||||||||||||||||||||||||||||||||||||||
Sbjct: 257  ctcatccttgaggacaaggatgttttcaaggggatggt 220


>gnl|LJGI|TC80541 
          Length = 783

 Score = 71.9 bits (36), Expect = 1e-11
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                
Query: 1961 catccttgaggacaaggatgttttcaaggggatggt 1996
            ||||||||||||||||||||||||||||||||||||
Sbjct: 436  catccttgaggacaaggatgttttcaaggggatggt 471


>gnl|LJGI|TC76376 similar to UniRef100_Q1JX87 Cluster: Cytochrome c assembly protein;
            n=1; Desulfuromonas acetoxidans DSM 684|Rep: Cytochrome c
            assembly protein - Desulfuromonas acetoxidans DSM 684,
            partial (6%)
          Length = 1236

 Score = 71.9 bits (36), Expect = 1e-11
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                
Query: 1961 catccttgaggacaaggatgttttcaaggggatggt 1996
            ||||||||||||||||||||||||||||||||||||
Sbjct: 940  catccttgaggacaaggatgttttcaaggggatggt 975


>gnl|LJGI|TC63699 
          Length = 738

 Score = 71.9 bits (36), Expect = 1e-11
 Identities = 36/36 (100%)
 Strand = Plus / Plus

                                                
Query: 1961 catccttgaggacaaggatgttttcaaggggatggt 1996
            ||||||||||||||||||||||||||||||||||||
Sbjct: 455  catccttgaggacaaggatgttttcaaggggatggt 490