Miyakogusa Predicted Gene
- Lj2g3v2002040.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2002040.1 tr|Q19PK4|Q19PK4_POPTR NBS-LRR type disease
resistance protein OS=Populus trichocarpa PE=2 SV=1,30.48,1e-18,P-loop
containing nucleoside triphosphate hydrolases,NULL;
PapD-like,PapD-like; VESICLE-ASSOCIATED
M,NODE_49463_length_1161_cov_54.725235.path1.1
(1215 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59728 similar to UniRef100_A7PYF7 Cluster: Chromosome... 2064 0.0
gnl|LJGI|TC71571 similar to UniRef100_A8W459 Cluster: Vesicle-as... 793 0.0
gnl|LJGI|TC63964 weakly similar to UniRef100_Q2XPG8 Cluster: TIR... 426 e-118
gnl|LJGI|GO023631 similar to UniRef100_A7PYF7 Cluster: Chromosom... 351 6e-96
gnl|LJGI|TC57877 similar to UniRef100_Q9SC83 Cluster: VAP27; n=1... 351 6e-96
gnl|LJGI|TC80032 similar to UniRef100_A7QY86 Cluster: Chromosome... 307 9e-83
gnl|LJGI|FS335260 similar to UniRef100_Q8S4X3 Cluster: TIR-simil... 109 4e-23
gnl|LJGI|TC57419 similar to UniRef100_Q6HLJ2 Cluster: ABC transp... 109 4e-23
gnl|LJGI|TC74978 similar to UniRef100_A8W459 Cluster: Vesicle-as... 58 1e-07
>gnl|LJGI|TC59728 similar to UniRef100_A7PYF7 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 1323
Score = 2064 bits (1041), Expect = 0.0
Identities = 1048/1049 (99%), Gaps = 1/1049 (0%)
Strand = Plus / Plus
Query: 1 atgcaagcgcagaaggaagctccacctgatatgcaatgcaaggataagtttcttattcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 atgcaagcgcagaaggaagctccacctgatatgcaatgcaaggataagtttcttattcta 329
Query: 61 agcgtaaaagtagatgatggagtcaccccaaaggatatcacttcagaaatgttcaacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agcgtaaaagtagatgatggagtcaccccaaaggatatcacttcagaaatgttcaacaag 389
Query: 121 gaatcagggcacattgttgaagaatgcaaattgagcgtggtgtatgttgctccaccccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 gaatcagggcacattgttgaagaatgcaaattgagcgtggtgtatgttgctccaccccaa 449
Query: 181 cctccgtctccagttgccgaaggttctgaggaaggctcatcgcccagtagttctgattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cctccgtctccagttgccgaaggttctgaggaaggctcatcgcccagtagttctgattct 509
Query: 241 gtagagaagggaattgaattgataattcctttgattaatttggtagcgagtggatttact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 gtagagaagggaattgaattgataattcctttgattaatttggtagcgagtggatttact 569
Query: 301 gaactacttgaggcttcagaaaaatctgcagagttcgacgaggaatcagggcacattgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gaactacttgaggcttcagaaaaatctgcagagttcgacgaggaatcagggcacattgtt 629
Query: 361 actccacctcaacctccttctccagttgcggaaggttctgaggaagggtcatcgcctaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 actccacctcaacctccttctccagttgcggaaggttctgaggaagggtcatcgcctaga 689
Query: 421 ggttctgtttctgaaaacggaaatgtcaatggttctgactcttatgcaaagtctatgtct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ggttctgtttctgaaaacggaaatgtcaatggttctgactcttatgcaaagtctatgtct 749
Query: 481 tccaactctacggaagaagcatttaatgatgatacttttgaaggtttacaactaacttca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tccaactctacggaagaagcatttaatgatgatacttttgaaggtttacaactaacttca 809
Query: 541 ggagactttatgtatttgggctctacaaatcaagctagaaatattcttttgaaggcactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 ggagactttatgtatttgggctctacaaatcaagctagaaatattcttttgaaggcactg 869
Query: 601 caagatgatagataccattcaattggattatttggaaagagaggctctggtaaaacagca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 caagatgatagataccattcaattggattatttggaaagagaggctctggtaaaacagca 929
Query: 661 ctggtgaaagctgagatacctgagtatgaaaatatttttcacttagttgtgtatgttact 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 ctggtgaaagctgagatacctgagtatgaaaatatttttcacttagttgtgtatgttact 989
Query: 721 gtgtcagaacaagcagatattgcgaaacttcagaatcaaatcgctcaccaattgaatcta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 gtgtcagaacaagcagatattgcgaaacttcagaatcaaatcgctcaccaattgaatcta 1049
Query: 781 aaacttaaggcagttaaaagtaaacacagaagagcatcagcaatagagtcagcattattg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 aaacttaaggcagttaaaagtaaacacagaagagcatcagcaatagagtcagcattattg 1109
Query: 841 aaaagtgtgggtaaagttcttgtcatctttgatgatgtttcgacaaactttggtcctcaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 aaaagtgtgggtaaagttcttgtcatctttgatgatgtttcgacaaactttggtcctcaa 1169
Query: 901 gatattgaagatattggcattcctgatcctagtaaacaactcaagatccttttgatcaca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 gatattgaagatattggcattcctgatcctagtaaacaactcaagatccttttgatcaca 1229
Query: 961 catgacaaaaagtactgcaacatgatcagatgtaatccttggattcctctgtacccctta 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 catgacaaaaagtactgcaacatgatcagatgtaatccttggattcctctgtacccctta 1289
Query: 1021 tctgatgaggatgcttggaagttgctcca 1049
|||||||| ||||||||||||||||||||
Sbjct: 1290 tctgatga-gatgcttggaagttgctcca 1317
>gnl|LJGI|TC71571 similar to UniRef100_A8W459 Cluster: Vesicle-associated protein;
n=1; Medicago truncatula|Rep: Vesicle-associated protein
- Medicago truncatula (Barrel medic), partial (62%)
Length = 736
Score = 793 bits (400), Expect = 0.0
Identities = 400/400 (100%)
Strand = Plus / Plus
Query: 1 atgcaagcgcagaaggaagctccacctgatatgcaatgcaaggataagtttcttattcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atgcaagcgcagaaggaagctccacctgatatgcaatgcaaggataagtttcttattcta 396
Query: 61 agcgtaaaagtagatgatggagtcaccccaaaggatatcacttcagaaatgttcaacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 agcgtaaaagtagatgatggagtcaccccaaaggatatcacttcagaaatgttcaacaag 456
Query: 121 gaatcagggcacattgttgaagaatgcaaattgagcgtggtgtatgttgctccaccccaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 gaatcagggcacattgttgaagaatgcaaattgagcgtggtgtatgttgctccaccccaa 516
Query: 181 cctccgtctccagttgccgaaggttctgaggaaggctcatcgcccagtagttctgattct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cctccgtctccagttgccgaaggttctgaggaaggctcatcgcccagtagttctgattct 576
Query: 241 gtagagaagggaattgaattgataattcctttgattaatttggtagcgagtggatttact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gtagagaagggaattgaattgataattcctttgattaatttggtagcgagtggatttact 636
Query: 301 gaactacttgaggcttcagaaaaatctgcagagttcgacgaggaatcagggcacattgtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gaactacttgaggcttcagaaaaatctgcagagttcgacgaggaatcagggcacattgtt 696
Query: 361 actccacctcaacctccttctccagttgcggaaggttctg 400
||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 actccacctcaacctccttctccagttgcggaaggttctg 736
Score = 81.8 bits (41), Expect = 9e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 357 tgttactccacctcaacctccttctccagttgcggaaggttctgaggaagggtcatcgcc 416
|||| ||||||| |||||||| ||||||||||| ||||||||||||||||| ||||||||
Sbjct: 501 tgttgctccaccccaacctccgtctccagttgccgaaggttctgaggaaggctcatcgcc 560
Query: 417 tagaggttctgtttctg 433
|| |||||| |||||
Sbjct: 561 cagtagttctgattctg 577
>gnl|LJGI|TC63964 weakly similar to UniRef100_Q2XPG8 Cluster: TIR-NBS disease
resistance-like protein; n=1; Populus trichocarpa|Rep:
TIR-NBS disease resistance-like protein - Populus
trichocarpa (Western balsam poplar) (Populus
balsamiferasubsp. trichocarpa), partial (7%)
Length = 921
Score = 426 bits (215), Expect = e-118
Identities = 255/267 (95%), Gaps = 1/267 (0%)
Strand = Plus / Plus
Query: 949 cttttgatcacacatgacaaaaagtactgcaacatgatcagatgtaatccttggattcct 1008
|||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||
Sbjct: 16 cttttgatcacacatgacaaaatgtactgcaacatgatcagatgtaa-ccttggattcct 74
Query: 1009 ctgtaccccttatctgatgaggatgcttggaagttgctccaacaatattcaagcatagac 1068
||| | ||||||||| ||||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 75 ctgcatcccttatctaatgaggatgcttggaagctgctccaacaatattcaggcatagac 134
Query: 1069 aatgactccccatccgacctgatcaatgtggcacgtgaagttgcatttctatgtatgggg 1128
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||
Sbjct: 135 aatgactccccatccgacctgatcaacgtggcacgtgaagttgcatttctatgtataggg 194
Query: 1129 ttacctcgtgtaattgaagatgttgtgtcttccttacataaaaaggacactaagcactgg 1188
||||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 195 ttacctcgtgtaattaaagatgttgtgtctgctttacataaaaaggacactaagcactgg 254
Query: 1189 aaagaaacattagactgtctaaatcat 1215
|||||||||||||||||||||||||||
Sbjct: 255 aaagaaacattagactgtctaaatcat 281
>gnl|LJGI|GO023631 similar to UniRef100_A7PYF7 Cluster: Chromosome chr15 scaffold_37,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr15 scaffold_37, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (66%)
Length = 677
Score = 351 bits (177), Expect = 6e-96
Identities = 225/241 (93%)
Strand = Plus / Plus
Query: 1 atgcaagcgcagaaggaagctccacctgatatgcaatgcaaggataagtttcttattcta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 359 atgcaagcgcagaaggaagctccacctgatatgcaatgcaaggataagtttcttcttcaa 418
Query: 61 agcgtaaaagtagatgatggagtcaccccaaaggatatcacttcagaaatgttcaacaag 120
||||| |||||||| |||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 419 agcgtcaaagtagaggatggagtcaccgcaaaggatatcactgcagaaatgttcaacaag 478
Query: 121 gaatcagggcacattgttgaagaatgcaaattgagcgtggtgtatgttgctccaccccaa 180
||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 479 gaagcagggcacattgttgaagaatgcaaattgagagtggtgtatgttgctccacctcaa 538
Query: 181 cctccgtctccagttgccgaaggttctgaggaaggctcatcgcccagtagttctgattct 240
||||||||||| ||||| |||||||| ||||||||||||||||| || |||||| ||||
Sbjct: 539 cctccgtctccggttgcggaaggttccgaggaaggctcatcgcctagaggttctgtttct 598
Query: 241 g 241
|
Sbjct: 599 g 599
Score = 155 bits (78), Expect = 8e-37
Identities = 99/106 (93%)
Strand = Plus / Plus
Query: 357 tgttactccacctcaacctccttctccagttgcggaaggttctgaggaagggtcatcgcc 416
|||| |||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 523 tgttgctccacctcaacctccgtctccggttgcggaaggttccgaggaaggctcatcgcc 582
Query: 417 tagaggttctgtttctgaaaacggaaatgtcaatggttctgactct 462
|||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 583 tagaggttctgtttctgagaacggaaacgtcaatggttctgactct 628
>gnl|LJGI|TC57877 similar to UniRef100_Q9SC83 Cluster: VAP27; n=1; Nicotiana
plumbaginifolia|Rep: VAP27 - Nicotiana plumbaginifolia
(Leadwort-leaved tobacco), partial (92%)
Length = 1300
Score = 351 bits (177), Expect = 6e-96
Identities = 225/241 (93%)
Strand = Plus / Plus
Query: 1 atgcaagcgcagaaggaagctccacctgatatgcaatgcaaggataagtttcttattcta 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 319 atgcaagcgcagaaggaagctccacctgatatgcaatgcaaggataagtttcttcttcaa 378
Query: 61 agcgtaaaagtagatgatggagtcaccccaaaggatatcacttcagaaatgttcaacaag 120
||||| |||||||| |||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 379 agcgtcaaagtagaggatggagtcaccgcaaaggatatcactgcagaaatgttcaacaag 438
Query: 121 gaatcagggcacattgttgaagaatgcaaattgagcgtggtgtatgttgctccaccccaa 180
||| ||||||||||||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 439 gaagcagggcacattgttgaagaatgcaaattgagagtggtgtatgttgctccacctcaa 498
Query: 181 cctccgtctccagttgccgaaggttctgaggaaggctcatcgcccagtagttctgattct 240
||||||||||| ||||| |||||||| ||||||||||||||||| || |||||| ||||
Sbjct: 499 cctccgtctccggttgcggaaggttccgaggaaggctcatcgcctagaggttctgtttct 558
Query: 241 g 241
|
Sbjct: 559 g 559
Score = 163 bits (82), Expect = 3e-39
Identities = 100/106 (94%)
Strand = Plus / Plus
Query: 357 tgttactccacctcaacctccttctccagttgcggaaggttctgaggaagggtcatcgcc 416
|||| |||||||||||||||| ||||| |||||||||||||| |||||||| ||||||||
Sbjct: 483 tgttgctccacctcaacctccgtctccggttgcggaaggttccgaggaaggctcatcgcc 542
Query: 417 tagaggttctgtttctgaaaacggaaatgtcaatggttctgactct 462
|||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 543 tagaggttctgtttctgagaacggaaatgtcaatggttctgactct 588
>gnl|LJGI|TC80032 similar to UniRef100_A7QY86 Cluster: Chromosome chr2 scaffold_241,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_241, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (89%)
Length = 1411
Score = 307 bits (155), Expect = 9e-83
Identities = 209/227 (92%)
Strand = Plus / Plus
Query: 1 atgcaagcgcagaaggaagctccacctgatatgcaatgcaaggataagtttcttattcta 60
||||||||||||||||||||||| || ||||||||||||||||||||||||||| ||| |
Sbjct: 367 atgcaagcgcagaaggaagctccgccagatatgcaatgcaaggataagtttcttcttcaa 426
Query: 61 agcgtaaaagtagatgatggagtcaccccaaaggatatcacttcagaaatgttcaacaag 120
||||||||||| ||||||| ||| |||||||||| |||||| |||||||||||||||||
Sbjct: 427 tgcgtaaaagtaaatgatggggtctccccaaaggacatcactgcagaaatgttcaacaag 486
Query: 121 gaatcagggcacattgttgaagaatgcaaattgagcgtggtgtatgttgctccaccccaa 180
|||||||||||| | |||||||||| ||||||||| ||||||||||| ||||||| |||
Sbjct: 487 gaatcagggcacgtggttgaagaatccaaattgagagtggtgtatgtctctccacctcaa 546
Query: 181 cctccgtctccagttgccgaaggttctgaggaaggctcatcgcccag 227
||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 547 cctccgtctccagttgcggaaggttctgaggaaggctcatcgcccag 593
Score = 133 bits (67), Expect = 3e-30
Identities = 85/90 (94%), Gaps = 2/90 (2%)
Strand = Plus / Plus
Query: 362 ctccacctcaacctccttctccagttgcggaaggttctgaggaagggtcatcgcctagag 421
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||| ||||
Sbjct: 536 ctccacctcaacctccgtctccagttgcggaaggttctgaggaaggctcatcgcccagag 595
Query: 422 gttctgtttctgaaaacggaaatgtcaatg 451
|||| ||||||||||||||||||||||||
Sbjct: 596 gttc--tttctgaaaacggaaatgtcaatg 623
>gnl|LJGI|FS335260 similar to UniRef100_Q8S4X3 Cluster: TIR-similar-domain-containing
protein TSDC; n=1; Pisum sativum|Rep:
TIR-similar-domain-containing protein TSDC - Pisum
sativum (Garden pea), partial (8%)
Length = 755
Score = 109 bits (55), Expect = 4e-23
Identities = 91/103 (88%)
Strand = Plus / Plus
Query: 585 tcttttgaaggcactgcaagatgatagataccattcaattggattatttggaaagagagg 644
||||||||| ||||| |||||||||| || ||||||||||||| | |||||| |||| ||
Sbjct: 213 tcttttgaatgcactacaagatgatacatgccattcaattggactgtttggagagagggg 272
Query: 645 ctctggtaaaacagcactggtgaaagctgagatacctgagtat 687
||||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 273 ctctggtaaaacagctctagtgaaagccgagatacccgagtat 315
Score = 67.9 bits (34), Expect = 1e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 942 caagatccttttgatcacacatgacaaaaagtactgcaacatgatcagat 991
|||||| ||||||||||||||||||||||| | |||||||||||| ||||
Sbjct: 564 caagattcttttgatcacacatgacaaaaacttctgcaacatgatgagat 613
Score = 52.0 bits (26), Expect = 8e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 852 taaagttcttgtcatctttgatgatgtttc 881
||||| ||||||||||||||||||||||||
Sbjct: 474 taaagctcttgtcatctttgatgatgtttc 503
>gnl|LJGI|TC57419 similar to UniRef100_Q6HLJ2 Cluster: ABC transporter, ATP-binding
protein; possible multidrug transporter; n=1; Bacillus
thuringiensis serovar konkukian|Rep: ABC transporter,
ATP-binding protein; possible multidrug transporter -
Bacillus thuringiensis subsp. konkukian, partial (7%)
Length = 820
Score = 109 bits (55), Expect = 4e-23
Identities = 91/103 (88%)
Strand = Plus / Plus
Query: 585 tcttttgaaggcactgcaagatgatagataccattcaattggattatttggaaagagagg 644
||||||||| ||||| |||||||||| || ||||||||||||| | |||||| |||| ||
Sbjct: 121 tcttttgaatgcactacaagatgatacatgccattcaattggactgtttggagagagggg 180
Query: 645 ctctggtaaaacagcactggtgaaagctgagatacctgagtat 687
||||||||||||||| || |||||||| |||||||| ||||||
Sbjct: 181 ctctggtaaaacagctctagtgaaagccgagatacccgagtat 223
Score = 67.9 bits (34), Expect = 1e-10
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 942 caagatccttttgatcacacatgacaaaaagtactgcaacatgatcagat 991
|||||| ||||||||||||||||||||||| | |||||||||||| ||||
Sbjct: 472 caagattcttttgatcacacatgacaaaaacttctgcaacatgatgagat 521
Score = 52.0 bits (26), Expect = 8e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 852 taaagttcttgtcatctttgatgatgtttc 881
||||| ||||||||||||||||||||||||
Sbjct: 382 taaagctcttgtcatctttgatgatgtttc 411
>gnl|LJGI|TC74978 similar to UniRef100_A8W459 Cluster: Vesicle-associated protein;
n=1; Medicago truncatula|Rep: Vesicle-associated protein
- Medicago truncatula (Barrel medic), partial (86%)
Length = 742
Score = 58.0 bits (29), Expect = 1e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1 atgcaagcgcagaaggaagctccacctgatatgcaatgcaaggataagtttct 53
|||||||| || ||||| || || ||||| |||||||||||||||||||||||
Sbjct: 331 atgcaagcccaaaaggaggcacctcctgacatgcaatgcaaggataagtttct 383