Miyakogusa Predicted Gene
- Lj2g3v2001580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v2001580.1 tr|G7JXC3|G7JXC3_MEDTR Agenet domain containing
protein expressed OS=Medicago truncatula GN=MTR_5g01,73.04,0,seg,NULL;
Agenet,Agenet-like domain; Tudor-like domain present in plant
sequences,Tudor-like, plant;,CUFF.38333.1
(4848 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC72245 weakly similar to UniRef100_A7R3M7 Cluster: Chr... 1471 0.0
gnl|LJGI|TC76773 similar to UniRef100_A7R3M7 Cluster: Chromosome... 1207 0.0
gnl|LJGI|BP063970 similar to UniRef100_A7QM85 Cluster: Chromosom... 236 1e-60
>gnl|LJGI|TC72245 weakly similar to UniRef100_A7R3M7 Cluster: Chromosome chr2
scaffold_541, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr2 scaffold_541, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (10%)
Length = 866
Score = 1471 bits (742), Expect = 0.0
Identities = 757/762 (99%)
Strand = Plus / Plus
Query: 2776 ctgcaatctagtggtctcacaagaggttctgttgtggattatccacagccgcttgctaca 2835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ctgcaatctagtggtctcacaagaggttctgttgtggattatccacagccgcttgctaca 60
Query: 2836 ttgcatccttatcaatctccacctgtgaggaactttcttggacataacacatcttggtta 2895
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttgcatccttatcaatctccacctgtgaggaactttcttggacataacacatcttggtta 120
Query: 2896 tcccaagcctccattcgtggaccttggattagctctccaactcctgcgcccagcacccat 2955
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcccaagcctccattcgtggaccttggattagctctccaactcctgcgcccagcacccat 180
Query: 2956 ctttctgcatcacctgtctttgatacaattaagttaggttctggcaagggatcttctctg 3015
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctttctgcatcacctgtctttgatacaattaagttaggttctggcaagggatcttctctg 240
Query: 3016 cctccttcctcgagcataaagaatgttactcctggtcctccagcttccagtgcaggtttg 3075
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 241 cctccttcctcgagcataaagaatgttactcctggtcctccagcttccagtgcaggttgg 300
Query: 3076 caaggtatctttgttgggactgcttctcttttggacgtaatcaatgtggcagtatcacct 3135
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaggtatccttgttgggactgcttctcttttggacgtaatcaatgtggcagtatcacct 360
Query: 3136 gcgcagcattcttcagatcccaagcccaagaaaaggaaaaaaggtgtggtatctgaagat 3195
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcgcagcattcttcagatcccaagcccaagaaaaggaaaaaaggtgtggtatctgaagat 420
Query: 3196 cttggccagaaggctctgcagtcattgactccagcagtcagtaaccatacatctacttct 3255
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttggccagaaggctctgcagtcattgactccagcagtcagtaaccatacatctacttct 480
Query: 3256 tttgccgttttgactcctcttggcaatgtaccagttactgctgttgaaaaatcaattgtg 3315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tttgccgttttgactcctcttggcaatgtaccagttactgctgttgaaaaatcaattgtg 540
Query: 3316 tctgtctctcctctagataatcaacctgaaaatgatggaaatgttgagaagaggattcta 3375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tctgtctctcctctagataatcaacctgaaaatgatggaaatgttgagaagaggattcta 600
Query: 3376 tcagatgagtctcttatgaaagttaaggaggctaaggtatatgcagaagaagcttctgct 3435
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcagatgagtctcttatgaaagtgaaggaggctaaggtatatgcagaagaagcttctgct 660
Query: 3436 ctttctggtgctgctgtgaatcatagcctagagctatggaatcagttggataagtataaa 3495
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctttctgctgctgctgtgaatcatagcctagagctatggaatcagttggataagtataaa 720
Query: 3496 aattctagattgatgccagatgttgaggccaaattggcttcg 3537
|||||||||| |||||||||||||||||||||||||||||||
Sbjct: 721 aattctagatcgatgccagatgttgaggccaaattggcttcg 762
Score = 95.6 bits (48), Expect = 2e-18
Identities = 48/48 (100%)
Strand = Plus / Plus
Query: 3594 caatgttgcatcaaatgctgcatttcaagcaaaactgatggctgatga 3641
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 caatgttgcatcaaatgctgcatttcaagcaaaactgatggctgatga 866
>gnl|LJGI|TC76773 similar to UniRef100_A7R3M7 Cluster: Chromosome chr2 scaffold_541,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_541, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (31%)
Length = 1226
Score = 1207 bits (609), Expect = 0.0
Identities = 612/613 (99%)
Strand = Plus / Plus
Query: 4153 cacaaagtttatgatttagttaagcctgttgatatggtttctggatctgagcctgaaata 4212
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacaaagtttatgatttagttaagcctgttgatatggtttctggatctgagcctgaaata 60
Query: 4213 tgggctccttcttccattgttaaaaatggatctgaaaatcttgaggaaaacaacttcaag 4272
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tgggctccttcttccattgttaaaaatggatctgaaaatcttgaggaaaacaacttcaag 120
Query: 4273 gagggctctcttgttgaggttttcaaagatgaggaagggtataaagctgcatggttcgtt 4332
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gagggctctcttgttgaggttttcaaagatgaggaagggtataaagctgcatggttcgtt 180
Query: 4333 gctaatattttgagtttgaaggatgataaagctttcatatgctacacatcgcttgtacct 4392
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 181 gctaatattttgagtttgaaggatgataaagctttcgtatgctacacatcgcttgtacct 240
Query: 4393 gttgaaggtgctgggcctttaaaggaatgggtttcacttgaacatgatggagacaaacca 4452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttgaaggtgctgggcctttaaaggaatgggtttcacttgaacatgatggagacaaacca 300
Query: 4453 cccagaatacgtactgctcgccctttaactagtttacaacatgaaggaacaagaaagaga 4512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cccagaatacgtactgctcgccctttaactagtttacaacatgaaggaacaagaaagaga 360
Query: 4513 cgtagagcagctatgggagattatgcatggtctgttggggatagagttgacgcatgggtt 4572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cgtagagcagctatgggagattatgcatggtctgttggggatagagttgacgcatgggtt 420
Query: 4573 caagaaagctggcaggaaggagtgatcacagagaagaataagaaagatgaaacgacattg 4632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 caagaaagctggcaggaaggagtgatcacagagaagaataagaaagatgaaacgacattg 480
Query: 4633 actgtccactttccaggtagcggagaaacatcggttgttcgagcctggcatctccatcca 4692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 actgtccactttccaggtagcggagaaacatcggttgttcgagcctggcatctccatcca 540
Query: 4693 tcccttatttggaaggatgggaaatggattgaatcttccaaggtggaagcaaatgaccgt 4752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcccttatttggaaggatgggaaatggattgaatcttccaaggtggaagcaaatgaccgt 600
Query: 4753 tctacacatgagg 4765
|||||||||||||
Sbjct: 601 tctacacatgagg 613
>gnl|LJGI|BP063970 similar to UniRef100_A7QM85 Cluster: Chromosome chr5 scaffold_124,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_124, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 397
Score = 236 bits (119), Expect = 1e-60
Identities = 126/127 (99%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 4 gattatgatgacaatgattttcaaggccagaatctccatttagctggtgaaggtagcgcc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 gattatgatgacaatgattttcaaggccagaatctccatttagctggtgaaggtagcgcc 176
Query: 64 aaatttcctccagtattaaggccgtatgctctctccaagtttga-ttttgatgaaaacct 122
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 177 aaatttcctccagtattaaggccgtatgctctctccaagtttgatttttgatgaaaacct 236
Query: 123 tcaagca 129
|||||||
Sbjct: 237 tcaagca 243