Miyakogusa Predicted Gene
- Lj2g3v1989220.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1989220.4 CUFF.38310.4
(645 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75519 similar to UniRef100_A7QY34 Cluster: Chromosome... 553 e-157
gnl|LJGI|TC58743 similar to UniRef100_A7QY34 Cluster: Chromosome... 329 1e-89
gnl|LJGI|TC79822 homologue to UniRef100_A7QY34 Cluster: Chromoso... 139 2e-32
gnl|LJGI|AV771188 similar to UniRef100_A7QY34 Cluster: Chromosom... 72 5e-12
>gnl|LJGI|TC75519 similar to UniRef100_A7QY34 Cluster: Chromosome undetermined
scaffold_237, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_237,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (32%)
Length = 549
Score = 553 bits (279), Expect = e-157
Identities = 285/287 (99%)
Strand = Plus / Plus
Query: 1 atgcggtggttgccgctgagcacagtgacaagcacggaaagggacagtgaggaagagaat 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 263 atgcggtggttgccgctgagcacagtgtcaagcacggaaagggacagtgaggaagagaat 322
Query: 61 cctgctatggtgtatctgaatgtatatgatcttactaccatcaacaactatctttactgc 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cctgctatggtgtatctcaatgtatatgatcttactaccatcaacaactatctttactgc 382
Query: 121 tttggccttggagcctttcattccggtattcaagtgtatggtgtagaatatggctttgga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tttggccttggagcctttcattccggtattcaagtgtatggtgtagaatatggctttgga 442
Query: 181 gcgcatgaatacccaagtagtggtgtgtttgaggtggaacctagaagctgtcctggcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 gcgcatgaatacccaagtagtggtgtgtttgaggtggaacctagaagctgtcctggcttc 502
Query: 241 atctttagacaatcaatcttgttgggtagcactgatctgtctgtctc 287
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 atctttagacaatcaatcttgttgggtagcactgatctgtctgtctc 549
>gnl|LJGI|TC58743 similar to UniRef100_A7QY34 Cluster: Chromosome undetermined
scaffold_237, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_237,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (69%)
Length = 1126
Score = 329 bits (166), Expect = 1e-89
Identities = 451/546 (82%)
Strand = Plus / Plus
Query: 65 ctatggtgtatctgaatgtatatgatcttactaccatcaacaactatctttactgctttg 124
||||||||||||| ||||| ||||||||||| | |||||| ||||||||| || |
Sbjct: 246 ctatggtgtatctcaatgtgtatgatcttacgcctgccaacaattatctttacgtattcg 305
Query: 125 gccttggagcctttcattccggtattcaagtgtatggtgtagaatatggctttggagcgc 184
| ||||| ||||||||| ||||| ||||| ||||| | ||||||||||||||||| |
Sbjct: 306 gggttggaatctttcattcgggtatagaagtgcatggtatggaatatggctttggagcac 365
Query: 185 atgaatacccaagtagtggtgtgtttgaggtggaacctagaagctgtcctggcttcatct 244
|||| ||||||| |||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 366 atgagtacccaacaagtggtgtttttgaggtgcaacctagaagctgtcctggcttcatct 425
Query: 245 ttagacaatcaatcttgttgggtagcactgatctgtctgtctcagaattccattctttca 304
| |||| ||||| ||||| || ||||||||| ||||| |||||||| | |||||||
Sbjct: 426 tcagacgttcaatattgttaggcagcactgatatgtcttattcagaatttcgatctttca 485
Query: 305 tggagcacctctctgcaaaatatcatggagacacttatcatctaattgccaaaaactgca 364
| |||| ||| ||||| |||||||||||||||||||| ||||| ||||| || || ||||
Sbjct: 486 ttgagcgcctttctgcgaaatatcatggagacacttaccatctgattgctaagaattgca 545
Query: 365 accattttacggatgaagtttgccaacaactaacaggaaatcctatccctggatgggtaa 424
||||||| || ||||||||||||||||||||||| ||||| |||| |||| ||||||||
Sbjct: 546 accatttcacagatgaagtttgccaacaactaactggaaaggctatacctgcatgggtaa 605
Query: 425 atcggctggcaagtgtgggttctttctgccattgtcttcttccagaaagcatgcagcttg 484
||||| |||| |||| |||||||||||| |||||||||| || |||||| | ||| |||
Sbjct: 606 atcggttggctcgtgttggttctttctgcaattgtcttctgcctgaaagccttcaggttg 665
Query: 485 ctgcagttagacatgcccctgagcaacttgtatatgctgatgatgacagatcaggatctg 544
|||| |||||||| ||||| || |||| || |||||||||| |||||| |||||
Sbjct: 666 ctgctgttagacaccttcctgaacatcttgaatgctctgatgatgagggatcagaatctg 725
Query: 545 atggcttttctctgtctattgagagtgaagaggaggatcccaatcagcatctgctaactg 604
||||| |||| || |||| |||||||| |||| | | ||||| ||||||||||||
Sbjct: 726 atggcctttcggaatcagttgatagtgaagacgagggttcaaatcaccatctgctaactt 785
Query: 605 caccaa 610
||||||
Sbjct: 786 caccaa 791
>gnl|LJGI|TC79822 homologue to UniRef100_A7QY34 Cluster: Chromosome undetermined
scaffold_237, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_237,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (28%)
Length = 391
Score = 139 bits (70), Expect = 2e-32
Identities = 157/186 (84%)
Strand = Plus / Plus
Query: 65 ctatggtgtatctgaatgtatatgatcttactaccatcaacaactatctttactgctttg 124
||||||||||||| ||||| ||||||||||| | |||||| ||||||||| || |
Sbjct: 196 ctatggtgtatctcaatgtgtatgatcttacgcctgccaacaattatctttacgtattcg 255
Query: 125 gccttggagcctttcattccggtattcaagtgtatggtgtagaatatggctttggagcgc 184
| ||||| ||||||||| ||||| ||||| ||||| | ||||||||||||||||| |
Sbjct: 256 gggttggaatctttcattcgggtatagaagtgcatggtatggaatatggctttggagcac 315
Query: 185 atgaatacccaagtagtggtgtgtttgaggtggaacctagaagctgtcctggcttcatct 244
|||| ||||||| |||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct: 316 atgagtacccaacaagtggtgtttttgaggtgcaacctagaagctgtcctggcttcatct 375
Query: 245 ttagac 250
| ||||
Sbjct: 376 tcagac 381
>gnl|LJGI|AV771188 similar to UniRef100_A7QY34 Cluster: Chromosome undetermined
scaffold_237, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_237,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (16%)
Length = 506
Score = 71.9 bits (36), Expect = 5e-12
Identities = 87/104 (83%)
Strand = Plus / Minus
Query: 394 ctaacaggaaatcctatccctggatgggtaaatcggctggcaagtgtgggttctttctgc 453
||||| ||||| |||| |||| |||||||||||| |||| |||| ||||||||||||
Sbjct: 506 ctaactggaaaggctatacctgcatgggtaaatcgattggctcgtgttggttctttctgc 447
Query: 454 cattgtcttcttccagaaagcatgcagcttgctgcagttagaca 497
|||||||||| || |||||| | ||| ||||||| ||||||||
Sbjct: 446 aattgtcttctgcctgaaagccttcaggttgctgctgttagaca 403