Miyakogusa Predicted Gene

Lj2g3v1989100.2
Show Alignment: 

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1989100.2 tr|A9TEH6|A9TEH6_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_169610,52.48,0.0000000000005,seg,NULL;
coiled-coil,NULL,CUFF.38297.2
         (921 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC82641 similar to UniRef100_A7R0F0 Cluster: Chromosome...  1810   0.0  

>gnl|LJGI|TC82641 similar to UniRef100_A7R0F0 Cluster: Chromosome undetermined
           scaffold_306, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_306,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (41%)
          Length = 1220

 Score = 1810 bits (913), Expect = 0.0
 Identities = 919/921 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaagtagcagtgagagtgagagggatggaatcggaattcgaatcgagaatccattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  atggaaagtagcagtgagagtgagagggatggaatcggaattcgaatcgagaatccattt 129

                                                                       
Query: 61  actttgaaggtaggtcaagtgttcactggttttggaatcggttgtggagttggaatcggc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 actttgaaggtaggtcaagtgttcactggttttggaatcggttgtggagttggaatcggc 189

                                                                       
Query: 121 gttggacgccctttaaatttaggtgcaattccgatgttgaatgaggtaatgagtgccact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 gttggacgccctttaaatttaggtgcaattccgatgttgaatgaggtaatgagtgccact 249

                                                                       
Query: 181 aggggtgcaaccgatgctttttctggggtttccaggcatgttaattcttctttgaagaag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 aggggtgcaaccgatgctttttctggggtttccaggcatgttaattcttctttgaagaag 309

                                                                       
Query: 241 tttggagctaagaatatcgaagtagggattggatgtggtgttggtttcggtcatggtttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tttggagctaagaatatcgaagtagggattggatgtggtgttggtttcggtcatggtttt 369

                                                                       
Query: 301 ggagctggccttgctgtgaaaccaggggtgttgaatcaaattcaatcttgtgttgcagta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 ggagctggccttgctgtgaaaccaggggtgttgaatcaaattcaatcttgtgttgcagta 429

                                                                       
Query: 361 gcagtcacaaagatgatgatgaagtttggacttactcccagtctaccctttagtcagagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 gcagtcacaaagatgatgatgaagtttggacttactcccagtctaccctttagtcagagt 489

                                                                       
Query: 421 gcaattccagcatccttgcaaagtgccacaggcacattcaacacaaacaaaatttctgca 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gcaattccagcatccttgcaaagtgccacaggcacattcaacacaaacaaaatttctgca 549

                                                                       
Query: 481 ggaagcatggtgcagttggcaactagatcaactgatcacatatctcaaagtccagcaggg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 550 ggaagcatggtgcagttggcaactagatcaactgatcacatatctcaaagtcctgcaggg 609

                                                                       
Query: 541 tctcagcctgtgcagattggttctgcttttgaaaatactgcattaaaaggcacctcagtt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 tctcagcctgtgcagattggttctgcttttgaaaatactgcattaaaaggcacctcagtt 669

                                                                       
Query: 601 gactctgcattaaaaggcacctcagttgactctgcatttggcagccggactgagaaggtc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gactctgcattaaaaggcacctcagttgactctgcatttggcagccggactgagaaggtc 729

                                                                       
Query: 661 cttaacaattttctgcaaagcccagtgttgaagggagaaggaggcggatctgatgaagca 720
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 730 cttaacaattttctgcaaagcccagtgttgaagggagaaggaggcggatttgatgaagca 789

                                                                       
Query: 721 gctaaacgcttgcagtcagagaacaaaatacttcaaatggttttgaaacaccaacaaatc 780
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 gctaaacgcttgcagtcagagaacaaaatacttcaaatggttttgaaacaccaacaaatc 849

                                                                       
Query: 781 attgaagaacttgtggaggaaaatgagaagcttcgccagatactagtggaggaccttaaa 840
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 attgaagaacttgtggaggaaaatgagaagcttcgccagatactagtggaggaccttaaa 909

                                                                       
Query: 841 gtaccatccagcaagcttcacgctagtcattcaggtagaatgagaaatacgttaccatgt 900
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 gtaccatccagcaagcttcacgctagtcattcaggtagaatgagaaatacgttaccatgt 969

                                
Query: 901 actgattgttttgagtgccga 921
           |||||||||||||||||||||
Sbjct: 970 actgattgttttgagtgccga 990