Miyakogusa Predicted Gene

Lj2g3v1989080.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1989080.1 tr|C1EF35|C1EF35_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_87955
,44.95,6e-19,rplS_bact: ribosomal protein L19,Ribosomal protein L19;
seg,NULL; Translation proteins SH3-like doma,CUFF.38298.1
         (681 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57629 similar to UniRef100_Q8W463 Cluster: 50S riboso...  1350   0.0  
gnl|LJGI|TC73233 homologue to UniRef100_A5B2A3 Cluster: Ribosoma...   400   e-111

>gnl|LJGI|TC57629 similar to UniRef100_Q8W463 Cluster: 50S ribosomal protein L19-1,
           chloroplast precursor; n=1; Arabidopsis thaliana|Rep:
           50S ribosomal protein L19-1, chloroplast precursor -
           Arabidopsis thaliana (Mouse-ear cress), partial (57%)
          Length = 1038

 Score = 1350 bits (681), Expect = 0.0
 Identities = 681/681 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcttctcaagtttttcttcagcaagggttgttactgtttgccccaaaccaatgttct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70  atggcttctcaagtttttcttcagcaagggttgttactgtttgccccaaaccaatgttct 129

                                                                       
Query: 61  ccaaccaagctcggtgtatcttcttgcctcggttctcgtaactttccgttgatttcctcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 ccaaccaagctcggtgtatcttcttgcctcggttctcgtaactttccgttgatttcctcc 189

                                                                       
Query: 121 acctcaatttcatggcgttgcaacaaccctctctctgccaaaccctcttttgttgtcaga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 acctcaatttcatggcgttgcaacaaccctctctctgccaaaccctcttttgttgtcaga 249

                                                                       
Query: 181 gctgactccaatgtcgacgctgcttccgacaatgctggtgaagttccagaagctgaaggt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gctgactccaatgtcgacgctgcttccgacaatgctggtgaagttccagaagctgaaggt 309

                                                                       
Query: 241 agcgttgatcaggttcctgaagatggagaagcagaactagcttcggattctgaggtggag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 agcgttgatcaggttcctgaagatggagaagcagaactagcttcggattctgaggtggag 369

                                                                       
Query: 301 caacccaagccccctagaaagcaacgagtcaagcttggagatgttatggggatattgaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 caacccaagccccctagaaagcaacgagtcaagcttggagatgttatggggatattgaat 429

                                                                       
Query: 361 cagagggcaattgaggcatcggaaagcatgaggccgactccagaaattaggactggagat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cagagggcaattgaggcatcggaaagcatgaggccgactccagaaattaggactggagat 489

                                                                       
Query: 421 gttgtggaaatcaaactggaagttcctgagaacaagcgtaggttgtctatttataaaggt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gttgtggaaatcaaactggaagttcctgagaacaagcgtaggttgtctatttataaaggt 549

                                                                       
Query: 481 atagtcatctcaagacaaaatgctggtattcacacaactattcgaatccgaaggattatt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 atagtcatctcaagacaaaatgctggtattcacacaactattcgaatccgaaggattatt 609

                                                                       
Query: 541 gctggcacaggggttgagattgtcttcccaatttactcaccaaacatcaaagaaatcaaa 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 610 gctggcacaggggttgagattgtcttcccaatttactcaccaaacatcaaagaaatcaaa 669

                                                                       
Query: 601 gtggtaaaccaccgtaaagtcagaagagcaagattgtactatttaagagacaagcttccc 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gtggtaaaccaccgtaaagtcagaagagcaagattgtactatttaagagacaagcttccc 729

                                
Query: 661 agattctccactttcaaatga 681
           |||||||||||||||||||||
Sbjct: 730 agattctccactttcaaatga 750


>gnl|LJGI|TC73233 homologue to UniRef100_A5B2A3 Cluster: Ribosomal protein L19; n=1;
           Vitis vinifera|Rep: Ribosomal protein L19 - Vitis
           vinifera (Grape), partial (29%)
          Length = 551

 Score =  400 bits (202), Expect = e-111
 Identities = 202/202 (100%)
 Strand = Plus / Plus

                                                                       
Query: 480 tatagtcatctcaagacaaaatgctggtattcacacaactattcgaatccgaaggattat 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tatagtcatctcaagacaaaatgctggtattcacacaactattcgaatccgaaggattat 60

                                                                       
Query: 540 tgctggcacaggggttgagattgtcttcccaatttactcaccaaacatcaaagaaatcaa 599
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tgctggcacaggggttgagattgtcttcccaatttactcaccaaacatcaaagaaatcaa 120

                                                                       
Query: 600 agtggtaaaccaccgtaaagtcagaagagcaagattgtactatttaagagacaagcttcc 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agtggtaaaccaccgtaaagtcagaagagcaagattgtactatttaagagacaagcttcc 180

                                 
Query: 660 cagattctccactttcaaatga 681
           ||||||||||||||||||||||
Sbjct: 181 cagattctccactttcaaatga 202