Miyakogusa Predicted Gene
- Lj2g3v1988980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1988980.1 tr|G7JYL5|G7JYL5_MEDTR DNA repair endonuclease
UVH1 OS=Medicago truncatula GN=MTR_5g013480 PE=4
SV=1,85.26,0,seg,NULL; ERCC4 domain,ERCC4 domain; no description,DNA
repair nuclease, XPF-type/Helicase; coiled-c,CUFF.38284.1
(2874 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60168 similar to UniRef100_A7QZM4 Cluster: Chromosome... 1172 0.0
>gnl|LJGI|TC60168 similar to UniRef100_A7QZM4 Cluster: Chromosome undetermined
scaffold_279, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_279,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (61%)
Length = 779
Score = 1172 bits (591), Expect = 0.0
Identities = 594/595 (99%)
Strand = Plus / Plus
Query: 172 aaatccaaaatcaacttccacctcaaaaccctaaacccccaattctaccaaatcccctcc 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aaatccaaaatcaacttccacctcaaaaccctaaacccccaattctaccaaatcccctcc 244
Query: 232 gaaatcaccgccgatctccccgcccaccaccgccactccctctacacctccggcaacgcc 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gaaatcaccgccgatctccccgcccaccaccgccactccctctacacctccggcaacgcc 304
Query: 292 ttcttcatcaccgctaggatcctcatcgtcgacctcttaaccaacagactccctacctcc 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 ttcttcatcaccgctaggatcctcatcgtcgacctcttaaccaacagactccctacctcc 364
Query: 352 aaaatcgccgggatcgtcctcctcaacgcgcattccatctccgagacttccactgaagcg 411
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 365 aaaatcgccgggatcgtcctcctcaacgcacattccatctccgagacttccactgaagcg 424
Query: 412 ttcattgttagaatcttccggtcactcaatcgcgatgcgtacgtccgtgctttctctgat 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ttcattgttagaatcttccggtcactcaatcgcgatgcgtacgtccgtgctttctctgat 484
Query: 472 aagcctcacgcgatggtatcaggtttcgcgaaggcggagaggaccatgaagtgtttgttc 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 aagcctcacgcgatggtatcaggtttcgcgaaggcggagaggaccatgaagtgtttgttc 544
Query: 532 ctgcggaggctgcatctctggccgaggtttcaggtgtatgtgtcgcaggaattggagagg 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ctgcggaggctgcatctctggccgaggtttcaggtgtatgtgtcgcaggaattggagagg 604
Query: 592 gacccgccggatgtggtggatataagggtgccgatgactaggtatatggtggggattcag 651
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gacccgccggatgtggtggatataagggtgccgatgactaggtatatggtggggattcag 664
Query: 652 aaggctattattgaggtcatggacgcgtgcttgaaggagatgaggaagaccaataaggtt 711
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 aaggctattattgaggtcatggacgcgtgcttgaaggagatgaggaagaccaataaggtt 724
Query: 712 gacattgaggatttgacggtggagaatggcttgttcaagtcatttgatgagattg 766
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 gacattgaggatttgacggtggagaatggcttgttcaagtcatttgatgagattg 779
Score = 103 bits (52), Expect = 6e-21
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 1 atggttcaattccaggagcacataatcacagagcttctagaagactccaatggcgg 56
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14 atggttcaattcccggagcacataatcacagagcttctagaagactccaatggcgg 69