Miyakogusa Predicted Gene

Lj2g3v1988820.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1988820.1 Non Chatacterized Hit- tr|B9RUR3|B9RUR3_RICCO
ATP-dependent helicase, putative OS=Ricinus communis
G,47.32,0,DEAD-like helicases superfamily,Helicase, superfamily 1/2,
ATP-binding domain; helicase superfamily ,CUFF.38275.1
         (2916 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC79348 similar to UniRef100_A7PJT0 Cluster: Chromosome...    54   5e-06
gnl|LJGI|TC61565 weakly similar to UniRef100_A7QNP3 Cluster: Chr...    54   5e-06

>gnl|LJGI|TC79348 similar to UniRef100_A7PJT0 Cluster: Chromosome chr12 scaffold_18,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr12 scaffold_18, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 548

 Score = 54.0 bits (27), Expect = 5e-06
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 439 gaagaagaagaagaaggtggtggtgatggtg 469
           ||||||||||||||||||||||||| |||||
Sbjct: 59  gaagaagaagaagaaggtggtggtggtggtg 89


>gnl|LJGI|TC61565 weakly similar to UniRef100_A7QNP3 Cluster: Chromosome undetermined
           scaffold_133, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_133,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (82%)
          Length = 2098

 Score = 54.0 bits (27), Expect = 5e-06
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 439 gaagaagaagaagaaggtggtggtgatggtg 469
           ||||||||||||||||||||||||| |||||
Sbjct: 75  gaagaagaagaagaaggtggtggtggtggtg 105