Miyakogusa Predicted Gene
- Lj2g3v1988760.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1988760.1 tr|A9SJC1|A9SJC1_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_165246,25,8e-18,
,CUFF.38273.1
(1074 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60313 similar to UniRef100_A7PCG6 Cluster: Chromosome... 2111 0.0
gnl|LJGI|TC65121 similar to UniRef100_Q9LPJ1 Cluster: F6N18.11; ... 537 e-152
gnl|LJGI|BP049150 446 e-124
gnl|LJGI|TC73451 similar to UniRef100_A7PCG6 Cluster: Chromosome... 278 7e-74
>gnl|LJGI|TC60313 similar to UniRef100_A7PCG6 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (51%)
Length = 1269
Score = 2111 bits (1065), Expect = 0.0
Identities = 1068/1069 (99%)
Strand = Plus / Plus
Query: 6 ggcgccgaacaacacgaaggatctaacccaagccaccgctatggctttaaaccctccaaa 65
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 38 ggcgccgaacaacacgaaggatctaacccaagccaccgctatggctttaaaccctccaaa 97
Query: 66 atcccaacgtggactaaacaagccaaagtgcaaacagtgtggcaacgttgctcgctctag 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 atcccaacgtggactaaacaagccaaagtgcaaacagtgtggcaacgttgctcgctctag 157
Query: 126 gtgtccttatgaacaatgcaagaggtgctgttcaagaaatgaaaatccatgtcatattca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 gtgtccttatgaacaatgcaagaggtgctgttcaagaaatgaaaatccatgtcatattca 217
Query: 186 tgtgaagacgaattcaactttgccggacaagctgccatcttcttttggtgctccacttga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 tgtgaagacgaattcaactttgccggacaagctgccatcttcttttggtgctccacttga 277
Query: 246 tcagcaatccttagagacatctcaatcagcaactgcaagtagagttgcatcactccgaca 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 tcagcaatccttagagacatctcaatcagcaactgcaagtagagttgcatcactccgaca 337
Query: 306 actttccaacaattttgcgcagttcaataatttgaacatttcacttcgttcaaagaagcc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 actttccaacaattttgcgcagttcaataatttgaacatttcacttcgttcaaagaagcc 397
Query: 366 actgacaataaaggatgctgcaactataaatgaatggcgactttccaagttaaaggaata 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 actgacaataaaggatgctgcaactataaatgaatggcgactttccaagttaaaggaata 457
Query: 426 caaggagcgaaatattgacgtggaaaatgaaacttttgaccgttacatgcaaaatgtaga 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 caaggagcgaaatattgacgtggaaaatgaaacttttgaccgttacatgcaaaatgtaga 517
Query: 486 actactggaagaagtgttgtctgtgaaatctgtggaaaacaatatgacttctgcatcaga 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 actactggaagaagtgttgtctgtgaaatctgtggaaaacaatatgacttctgcatcaga 577
Query: 546 gtctcctactacttccatggaaaacaacaatgagatgatgaccacggggttgaaattaca 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 gtctcctactacttccatggaaaacaacaatgagatgatgaccacggggttgaaattaca 637
Query: 606 cctaagatcaaactctttcagaagtgatagtctgagaatgagaatacaacaatttgtaga 665
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 638 cctaagatcaaactctttcagaagtgatagtctgagaacgagaatacaacaatttgtaga 697
Query: 666 taagggattacacaggcttgagaagtttgcagtggatgatgacatcaataaaccaattga 725
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 taagggattacacaggcttgagaagtttgcagtggatgatgacatcaataaaccaattga 757
Query: 726 tgaagaacctagtgaagtttctaaaaggccaaaaagttgtagtgatgaaaggttatctgc 785
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 tgaagaacctagtgaagtttctaaaaggccaaaaagttgtagtgatgaaaggttatctgc 817
Query: 786 tataagtgatcttattgataaaatcaacaaagccaggagtgaggaggatttgaactcttg 845
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 818 tataagtgatcttattgataaaatcaacaaagccaggagtgaggaggatttgaactcttg 877
Query: 846 cttggagatgaagtcccaactcttcaatttggaagtggactctggctcaatagaaattct 905
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 878 cttggagatgaagtcccaactcttcaatttggaagtggactctggctcaatagaaattct 937
Query: 906 agaccatgaaacacctgagaatgaaattgctaaaagcgaatccacttcagcagaagaatt 965
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 938 agaccatgaaacacctgagaatgaaattgctaaaagcgaatccacttcagcagaagaatt 997
Query: 966 ggattattcttcaccgaaattggttgtaactgctgaagttgatcaagatactctaaacac 1025
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 998 ggattattcttcaccgaaattggttgtaactgctgaagttgatcaagatactctaaacac 1057
Query: 1026 tgtagacaggtacttatcttcccttgagcagcatgtagaggagttatga 1074
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1058 tgtagacaggtacttatcttcccttgagcagcatgtagaggagttatga 1106
>gnl|LJGI|TC65121 similar to UniRef100_Q9LPJ1 Cluster: F6N18.11; n=1; Arabidopsis
thaliana|Rep: F6N18.11 - Arabidopsis thaliana (Mouse-ear
cress), partial (13%)
Length = 844
Score = 537 bits (271), Expect = e-152
Identities = 274/275 (99%)
Strand = Plus / Plus
Query: 1 atggcggcgccgaacaacacgaaggatctaacccaagccaccgctatggctttaaaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 atggcggcgccgaacaacacgaaggatctaacccaagccaccgctatggctttaaaccct 101
Query: 61 ccaaaatcccaacgtggactaaacaagccaaagtgcaaacagtgtggcaacgttgctcgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 ccaaaatcccaacgtggactaaacaagccaaagtgcaaacagtgtggcaacgttgctcgc 161
Query: 121 tctaggtgtccttatgaacaatgcaagaggtgctgttcaagaaatgaaaatccatgtcat 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 162 tctaggtgtccttatgaacagtgcaagaggtgctgttcaagaaatgaaaatccatgtcat 221
Query: 181 attcatgtgaagacgaattcaactttgccggacaagctgccatcttcttttggtgctcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 attcatgtgaagacgaattcaactttgccggacaagctgccatcttcttttggtgctcca 281
Query: 241 cttgatcagcaatccttagagacatctcaatcagc 275
|||||||||||||||||||||||||||||||||||
Sbjct: 282 cttgatcagcaatccttagagacatctcaatcagc 316
>gnl|LJGI|BP049150
Length = 505
Score = 446 bits (225), Expect = e-124
Identities = 225/225 (100%)
Strand = Plus / Minus
Query: 850 gagatgaagtcccaactcttcaatttggaagtggactctggctcaatagaaattctagac 909
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gagatgaagtcccaactcttcaatttggaagtggactctggctcaatagaaattctagac 446
Query: 910 catgaaacacctgagaatgaaattgctaaaagcgaatccacttcagcagaagaattggat 969
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 catgaaacacctgagaatgaaattgctaaaagcgaatccacttcagcagaagaattggat 386
Query: 970 tattcttcaccgaaattggttgtaactgctgaagttgatcaagatactctaaacactgta 1029
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tattcttcaccgaaattggttgtaactgctgaagttgatcaagatactctaaacactgta 326
Query: 1030 gacaggtacttatcttcccttgagcagcatgtagaggagttatga 1074
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gacaggtacttatcttcccttgagcagcatgtagaggagttatga 281
>gnl|LJGI|TC73451 similar to UniRef100_A7PCG6 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 712
Score = 278 bits (140), Expect = 7e-74
Identities = 373/450 (82%), Gaps = 3/450 (0%)
Strand = Plus / Plus
Query: 64 aaatcccaacgtggactaaacaagccaaagtgcaaacagtgtggcaacgttgctcgctct 123
||||||||||| || | |||||||| |||||||| ||||||||||| || ||||| |||
Sbjct: 170 aaatcccaacgcggccataacaagcccaagtgcaagcagtgtggcaatgtcgctcgttct 229
Query: 124 aggtgtccttatgaacaatgcaagaggtgctgttcaagaaatgaaaatccatgtcatatt 183
||||| |||||||| |||||||| |||||| | |||||| |||| ||||||||||||
Sbjct: 230 aggtgcccttatgagtgttgcaagagttgctgtgccagaaatcaaaacccatgtcatatt 289
Query: 184 catgtg---aagacgaattcaactttgccggacaagctgccatcttcttttggtgctcca 240
|||||| || | ||||||||| | || || ||| |||||||||| || ||| |||
Sbjct: 290 catgtgttaaaagcaaattcaactgttcctgaaaagacgccatcttctggtgctgcccca 349
Query: 241 cttgatcagcaatccttagagacatctcaatcagcaactgcaagtagagttgcatcactc 300
||||||||||||||||| || | |||| ||| ||| ||| |||||| |||||| ||
Sbjct: 350 cttgatcagcaatccttggaactacctcattcaacaaatgctggtagagctgcatctctt 409
Query: 301 cgacaactttccaacaattttgcgcagttcaataatttgaacatttcacttcgttcaaag 360
|||||||||||||| | |||||| |||||||| |||||| || ||||||||||||||||
Sbjct: 410 cgacaactttccaatagttttgctcagttcaacaatttgcacctttcacttcgttcaaaa 469
Query: 361 aagccactgacaataaaggatgctgcaactataaatgaatggcgactttccaagttaaag 420
||||||||||||| ||||||||||| |||| || || ||| || || |||||||||||
Sbjct: 470 aagccactgacaagaaaggatgctgaggctatcaacgagtggagatttgccaagttaaag 529
Query: 421 gaatacaaggagcgaaatattgacgtggaaaatgaaacttttgaccgttacatgcaaaat 480
||||||||||||||||| || || || || |||||| |||||||||| ||||||||||||
Sbjct: 530 gaatacaaggagcgaaacatcgaagtagagaatgaagcttttgaccggtacatgcaaaat 589
Query: 481 gtagaactactggaagaagtgttgtctgtg 510
||||| | ||||||||||| ||| |||||
Sbjct: 590 gtagatttgctggaagaagtattggctgtg 619