Miyakogusa Predicted Gene
- Lj2g3v1988690.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1988690.2 tr|G7JYP5|G7JYP5_MEDTR Lon protease homolog
OS=Medicago truncatula GN=MTR_5g013790 PE=3 SV=1,88.54,0,P-loop
containing nucleoside triphosphate hydrolases,NULL; Ribosomal protein
S5 domain 2-like,Riboso,CUFF.38269.2
(2583 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW596573 homologue to UniRef100_A5BU86 Cluster: Lon pro... 521 e-147
gnl|LJGI|TC66638 similar to UniRef100_A7PCG5 Cluster: Chromosome... 484 e-135
gnl|LJGI|AV418083 homologue to UniRef100_A5BU86 Cluster: Lon pro... 305 7e-82
gnl|LJGI|TC68476 similar to UniRef100_A7PCG4 Cluster: Chromosome... 252 1e-65
>gnl|LJGI|BW596573 homologue to UniRef100_A5BU86 Cluster: Lon protease homolog; n=1;
Vitis vinifera|Rep: Lon protease homolog - Vitis
vinifera (Grape), partial (17%)
Length = 478
Score = 521 bits (263), Expect = e-147
Identities = 399/447 (89%)
Strand = Plus / Plus
Query: 553 ccagttcataagttggctgatatatttgttgctagctttgagataagttttgaagaacag 612
|||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct: 28 ccagttcacaagttgtttgatatatttgttgctagttttgagataagttttgaagaacaa 87
Query: 613 ttatcaatgttagattccgttgatgctaaattgaggctttcaaaagcaactgaattggtt 672
|||| ||||| ||||| ||||| | ||| |||||||||| ||||||||||| || |||
Sbjct: 88 ctatctatgttggattcagttgaccccaaagtgaggctttctaaagcaactgagttagtt 147
Query: 673 gataggcacttacagtcaatacgtgtagctgaaaaaattacacaaaaggttgaaggacaa 732
|||||||| ||||||||||||||||||||||| |||||||| |||||||||||||| |||
Sbjct: 148 gataggcatttacagtcaatacgtgtagctgagaaaattactcaaaaggttgaagggcaa 207
Query: 733 ttgtcaaaatctcaaaaagaatttcttctgcgccagcagatgagggcaataaaagaggag 792
||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||
Sbjct: 208 ttgtcaaaatctcaaaaagaatttcttttgcgccagcagatgagggctataaaagaggag 267
Query: 793 cttggtgataatgatgatgatgaggatgacctggctgccctggaaagaaagatgcaaagt 852
|||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||
Sbjct: 268 cttggtgataatgatgatgatgaggatgacctagctgcccttgaaagaaagatgcaaagt 327
Query: 853 gcaggaatgccacagagtatctggaagcatgctcacagagagttaaggagactnnnnnnn 912
|||||||||||||||||| | ||||| ||||| ||||||||||| ||||| |
Sbjct: 328 gcaggaatgccacagagtgtatggaaacatgcacacagagagttgaggaggattaaaaag 387
Query: 913 ntgcagcctcagcaacctgggtatagtagttcacgggcttacctagatcttcttgctgac 972
|||||||||||||||||||||| | |||||||||| ||||||||| |||||||||||
Sbjct: 388 atgcagcctcagcaacctgggtacaacagttcacgggtttacctagagcttcttgctgat 447
Query: 973 ctgccatggcagaaggccagcgaagag 999
|| || |||||||||||||| ||||||
Sbjct: 448 cttccctggcagaaggccagtgaagag 474
>gnl|LJGI|TC66638 similar to UniRef100_A7PCG5 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (74%)
Length = 824
Score = 484 bits (244), Expect = e-135
Identities = 485/565 (85%), Gaps = 9/565 (1%)
Strand = Plus / Plus
Query: 22 agtgtgaagttggtggaacaagaactttggcagcgagaagataagggtttgattggcatc 81
||||||||||||||||||||||||||||||||| ||||||| ||||| ||||||||||||
Sbjct: 263 agtgtgaagttggtggaacaagaactttggcagagagaagagaaggggttgattggcatc 322
Query: 82 ttgccagtacgtgatgctgctgaaactgaagtaaagccagtgggtcccactatatctcaa 141
|||||||| ||||||||||||| ||||| | |||| | ||||||||||| ||||||||
Sbjct: 323 ttgccagttcgtgatgctgctgctgctgaaattaagcaactgggtcccactgtatctcaa 382
Query: 142 gatgg------tgatactctagaccagagctcaaaagttcatggtgcttcatctgattct 195
| || |||| ||||||||| ||||||||||| | | | |||||| ||||||
Sbjct: 383 ggtgcaggaactgattttctagaccaaagctcaaaagtaaaagacggttcatcagattct 442
Query: 196 cacaagcttgatgcaaaagctcaaaatgatgttgttcattggcataacaggggggtagct 255
|| ||| |||| | ||| || ||||||| |||||||||||||||||| |||||||||
Sbjct: 443 cataaggctgataccaaaaagcagaatgatggtgttcattggcataacagaggggtagct 502
Query: 256 gctcgagcattgcacttgtcaaggggagtggagaaaccaagtggaagggtgacatatata 315
||||||||||| || || ||||||||||||||||| ||||||||||| || ||||| |||
Sbjct: 503 gctcgagcattacatttatcaaggggagtggagaagccaagtggaagagtcacatacata 562
Query: 316 gttgttcttgaaggtctgtgcagatttagtgtccaagaactaagcacaagaggaacttac 375
|| |||||||||||| |||| |||||||| || | ||||||| ||||||||||| ||
Sbjct: 563 gtagttcttgaaggtttgtgtagatttagcgttgaggaactaaacacaagaggaatatat 622
Query: 376 catactgcaaggatctcttcccttgagatgaataagactgagatggaacaggtggagcat 435
|||||||||||||| ||||||||||||| |||||||||||||||||| || |||||
Sbjct: 623 catactgcaaggatttcttcccttgagac---taagactgagatggaacaagtagagcaa 679
Query: 436 gacccagatttcataatgttatctcgccaatttaaagcaactgcaatggagcttatttct 495
|| |||||||||||| |||| ||||||| ||| ||||||||||| |||||||||||||||
Sbjct: 680 gatccagatttcatattgttgtctcgccgattcaaagcaactgcgatggagcttatttct 739
Query: 496 gttctggagcagaaacaaaaaactggtggaaggacaaaagttcttttggagactgtccca 555
|||||||||| |||||||||||||||||||||||||||| | |||||||| | ||| |||
Sbjct: 740 gttctggagctgaaacaaaaaactggtggaaggacaaaactccttttggacaatgttcca 799
Query: 556 gttcataagttggctgatatatttg 580
||||| |||||||||||||||||||
Sbjct: 800 gttcacaagttggctgatatatttg 824
>gnl|LJGI|AV418083 homologue to UniRef100_A5BU86 Cluster: Lon protease homolog; n=1;
Vitis vinifera|Rep: Lon protease homolog - Vitis vinifera
(Grape), partial (10%)
Length = 281
Score = 305 bits (154), Expect = 7e-82
Identities = 244/274 (89%)
Strand = Plus / Plus
Query: 1363 tctgatgttcgcggagatccagcttcagcactgcttgaggttcttgatcctgaacaaaat 1422
|||||| |||| ||||| || ||||||||| |||| |||||||| ||||| |||||||||
Sbjct: 8 tctgatattcgtggagacccggcttcagcattgctagaggttctggatccagaacaaaat 67
Query: 1423 aaaacattcaacgatcactatttgaatgttccatttgatctatccaaggtaatttttgtg 1482
||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 68 aaaacattcaatgatcactatttaaatgttccatttgatctatccaaggtagtttttgtg 127
Query: 1483 gccaccgcaaatagggcgcagcaaattcctccaccacttcttgacaggatggaggtcatt 1542
|| |||||||||||| ||||| ||||| |||||||||||||| |||||||| || |||
Sbjct: 128 gctaccgcaaataggatgcagcctattcccccaccacttcttgataggatggaagtaatt 187
Query: 1543 gagcttcctggatatacacctgaggaaaagctcaaaatagccatgaagcatttgattcca 1602
|||||||||||||||||||||||||||||||| | ||||||||| ||||||||||||
Sbjct: 188 gagcttcctggatatacacctgaggaaaagctacagatagccatgcgtcatttgattcca 247
Query: 1603 agagttttggaccagcatggtttgagttctgagt 1636
|||||| | ||||||||||| ||||||||||||
Sbjct: 248 agagttctagaccagcatgggctgagttctgagt 281
>gnl|LJGI|TC68476 similar to UniRef100_A7PCG4 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 758
Score = 252 bits (127), Expect = 1e-65
Identities = 236/271 (87%), Gaps = 1/271 (0%)
Strand = Plus / Plus
Query: 2312 agaaaagagtgagatccgatacagctatgactggagagatgacattgaggggtctggtac 2371
|||||||||||||||| |||||||||||||||||||||||||| || |||||||| || |
Sbjct: 2 agaaaagagtgagatcagatacagctatgactggagagatgacgttaaggggtcttgttc 61
Query: 2372 tacccgtaggtggtatc-aaggataagatattagctgcccatcgatgtggtattaagaga 2430
|||| || |||||| || |||||||||||||||||||| ||||| | |||||||||||||
Sbjct: 62 tacctgttggtggtgtctaaggataagatattagctgcacatcgttatggtattaagaga 121
Query: 2431 gtcatcatacctgaaaggaacttgaaggacttggttgaagtaccatcctcggtgctcgtc 2490
|| ||| | |||||||||||||||||||||||||||||||||||||| || ||||| | |
Sbjct: 122 gttatccttcctgaaaggaacttgaaggacttggttgaagtaccatcatcagtgctggcc 181
Query: 2491 aatttggagatactacttgcaaaacgaatggaagacgtgctggagcaagctcttgaaggt 2550
||| ||||||| || |||||||| ||| ||||||| ||| | ||||| || |||| |||
Sbjct: 182 aatctggagattctgcttgcaaagcgagtggaagatgtgttagagcatgcatttgacggt 241
Query: 2551 gggtgcccctggagacaccagtcaaagttgt 2581
|||||||| |||||||| | ||||||||||
Sbjct: 242 gggtgcccttggagacagaactcaaagttgt 272