Miyakogusa Predicted Gene

Lj2g3v1987530.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1987530.1 Non Chatacterized Hit- tr|I1J9N5|I1J9N5_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,96.99,0,seg,NULL; no
description,NULL; REGULATOR OF NONSENSE TRANSCRIPTS 1,NULL; DNA2/NAM7
HELICASE FAMILY,N,CUFF.38272.1
         (2088 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP063495 similar to UniRef100_A7PCF0 Cluster: Chromosom...   765   0.0  
gnl|LJGI|BP063265 homologue to UniRef100_A7PCF0 Cluster: Chromos...   670   0.0  

>gnl|LJGI|BP063495 similar to UniRef100_A7PCF0 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (9%)
          Length = 517

 Score =  765 bits (386), Expect = 0.0
 Identities = 388/389 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggattcacagcagaacaacaatctcttcgacaccgcttcgcaacccgacaccgccaac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atggattcacagcagaacaacaatctcttcgacaccgcttcgcaacccgacaccgccaac 188

                                                                       
Query: 61  gacgcttacactttcctcgaattcaacactcagggagaagatttcgactacccggagttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 gacgcttacactttcctcgaattcaacactcagggagaagatttcgactacccggagttt 248

                                                                       
Query: 121 cgcgacccgattaggtcaccggtggcatggcctacaccgtccgattcgctggctgacccg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 cgcgacccgattaggtcaccggtggcatggcctacaccgtccgattcgctggctgacccg 308

                                                                       
Query: 181 tctgagcgaggtggagccgggtcggaccaacagtctgatgcctcgcctgtttcggtggct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tctgagcgaggtggagccgggtcggaccaacagtctgatgcctcgcctgtttcggtggct 368

                                                                       
Query: 241 cctggaagcgcgaccaaggggcggtctgggagcagcggtgggagtagccaggtggtggat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 cctggaagcgcgaccaaggggcggtctgggagcagcggtgggagtagccaggtggtggat 428

                                                                       
Query: 301 gcactggctgcggggatgagcgggttgaatttcgaggatactggggatgatgataattat 360
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 429 gcactggctgcggggatgagcgggttgaatttcgaggatactgnggatgatgataattat 488

                                        
Query: 361 gagtatggtaaaggggatttcactgaaca 389
           |||||||||||||||||||||||||||||
Sbjct: 489 gagtatggtaaaggggatttcactgaaca 517


>gnl|LJGI|BP063265 homologue to UniRef100_A7PCF0 Cluster: Chromosome chr2 scaffold_11,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_11, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (12%)
          Length = 497

 Score =  670 bits (338), Expect = 0.0
 Identities = 348/350 (99%), Gaps = 1/350 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1739 catctgataagagtgaacttcataagttacaacagctaaaggatgaacaaggagaacttt 1798
            |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 1    catctgataagagtgaacttcata-gttacaacagctaaaggatgaacaaggagaacttt 59

                                                                        
Query: 1799 ccagcagtgatgagaaaaaatacaaagcacttaagcgagcaaccgagagggagatttctc 1858
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60   ccagcagtgatgagaaaaaatacaaagcacttaagcgagcaaccgagagggagatttctc 119

                                                                        
Query: 1859 agagtgctgatgtgatctgctgtacatgtgttggtgctggagatcctcggcttgcaaact 1918
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120  agagtgctgatgtgatctgctgtacatgtgttggtgctggagatcctcggcttgcaaact 179

                                                                        
Query: 1919 ttaggttccgtcaggtacttattgacgagtccacccaagcaacagaacctgagtgcctca 1978
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180  ttaggttccgtcaggtacttattgacgagtccacccaagcaacagaacctgagtgcctca 239

                                                                        
Query: 1979 ttcctttggttcttggagcaaagcaggttgttcttgttggtgatcattgtcagcttggtc 2038
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240  ttcctttggttcttggagcaaagcaggttgttcttgttggtgatcattgtcagcttggtc 299

                                                              
Query: 2039 cagttattatgtgcaagaaagcagctcgtgctgggttagcacaatagctt 2088
            ||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 300  cagttattatgtgcaagaaagcagctcgtgctgggttagcacaatcgctt 349