Miyakogusa Predicted Gene

Lj2g3v1985380.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1985380.1 Non Chatacterized Hit- tr|F7FFK3|F7FFK3_MONDO
Uncharacterized protein OS=Monodelphis domestica
GN=SL,33.33,2.1,seg,NULL,NODE_53400_length_515_cov_139.867966.path1.1
         (330 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74500 similar to UniRef100_Q77IW3 Cluster: ORF91; n=3...   646   0.0  
gnl|LJGI|TC71851 similar to UniRef100_Q28QG6 Cluster: Biopolymer...   194   2e-49

>gnl|LJGI|TC74500 similar to UniRef100_Q77IW3 Cluster: ORF91; n=3;
           Nucleopolyhedrovirus|Rep: ORF91 - Helicoverpa zea SNPV,
           partial (20%)
          Length = 1020

 Score =  646 bits (326), Expect = 0.0
 Identities = 329/330 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgttaccgtcctccccgcctacctccacccaccggccgccgccgtcgcacctttctgca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atgttaccgtcctccccgcctacctccacccaccggccgccgccgtcgcacctttctgca 300

                                                                       
Query: 61  gccttgtgcctctaccgtcgtctctgtgtctctaccaccgcttcctccgccgctgtcatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gccttgtgcctctaccgtcgtctctgtgtctctaccaccgcttcctccgccgctgtcatc 360

                                                                       
Query: 121 ttcatatgttgttggctttgttctgaagaccaccttcgcctgtttttcacccctgttttg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ttcatatgttgttggctttgttctgaagaccaccttcgcctgtttttcacccctgttttg 420

                                                                       
Query: 181 cttctccttgttgctgcctctggtgccacgaccgtgacctccaccaccatccaccaactg 240
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cttctccttgttgctgcctttggtgccacgaccgtgacctccaccaccatccaccaactg 480

                                                                       
Query: 241 cggcttccatcgctcataacagtttcttggtctcatcctttctttcctccagatctggtt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 cggcttccatcgctcataacagtttcttggtctcatcctttctttcctccagatctggtt 540

                                         
Query: 301 tgtttgctgcggggcttgcccctgacttaa 330
           ||||||||||||||||||||||||||||||
Sbjct: 541 tgtttgctgcggggcttgcccctgacttaa 570


>gnl|LJGI|TC71851 similar to UniRef100_Q28QG6 Cluster: Biopolymer transport protein
           ExbD/TolR; n=1; Jannaschia sp. CCS1|Rep: Biopolymer
           transport protein ExbD/TolR - Jannaschia sp. (strain
           CCS1), partial (16%)
          Length = 543

 Score =  194 bits (98), Expect = 2e-49
 Identities = 98/98 (100%)
 Strand = Plus / Plus

                                                                       
Query: 233 accaactgcggcttccatcgctcataacagtttcttggtctcatcctttctttcctccag 292
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   accaactgcggcttccatcgctcataacagtttcttggtctcatcctttctttcctccag 60

                                                 
Query: 293 atctggtttgtttgctgcggggcttgcccctgacttaa 330
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 61  atctggtttgtttgctgcggggcttgcccctgacttaa 98