Miyakogusa Predicted Gene
- Lj2g3v1984990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1984990.1 Non Chatacterized Hit- tr|I3SG06|I3SG06_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.09,0,Adap_comp_sub,Clathrin adaptor, mu subunit, C-terminal;
no description,NULL; MHD,Clathrin adaptor, m,CUFF.38233.1
(1320 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65601 homologue to UniRef100_A7PCC1 Cluster: Chromoso... 2609 0.0
gnl|LJGI|TC66743 homologue to UniRef100_A7PCC1 Cluster: Chromoso... 1055 0.0
gnl|LJGI|TC74197 homologue to UniRef100_A7PCC1 Cluster: Chromoso... 484 e-136
>gnl|LJGI|TC65601 homologue to UniRef100_A7PCC1 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), complete
Length = 1757
Score = 2609 bits (1316), Expect = 0.0
Identities = 1319/1320 (99%)
Strand = Plus / Plus
Query: 1 atgccggtggctgcttccgctatatacttcctcaacctccgcggagatgttctcatcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 146 atgccggtggctgcttccgctatatacttcctcaacctccgcggagatgttctcatcaat 205
Query: 61 cgcctctatcgagacgatgtcgggggaaatatggttgatgcttttcggacgcatataatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 cgcctctatcgagacgatgtcgggggaaatatggttgatgcttttcggacgcatataatg 265
Query: 121 caaaccaaagaactcggtacctgtcctgtgaagcagattggtggctgctctttcttttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 caaaccaaagaactcggtacctgtcctgtgaagcagattggtggctgctctttcttttac 325
Query: 181 atgaggatcagcaatgtctacatcgtcattgttgtcagcagcaatgctaatgtagcttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 atgaggatcagcaatgtctacatcgtcattgttgtcagcagcaatgctaatgtagcttgc 385
Query: 241 gctttcaagtttgttgttgaggctgttgcacttttcaaatcatattttggcggcgctttt 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 386 gctttcaagtttgttgttgaggctgttgcacttttcaaatcatattttggcggctctttt 445
Query: 301 gatgaggatgcaatccgcaataattttgtactcatttatgagcttctagatgaaatcatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 gatgaggatgcaatccgcaataattttgtactcatttatgagcttctagatgaaatcatg 505
Query: 361 gactttggctatcctcaaaatctttcaccggagatcttaaagctttatatcactcaggaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gactttggctatcctcaaaatctttcaccggagatcttaaagctttatatcactcaggaa 565
Query: 421 ggagtccgttccccattttcatcaaagcccgcagatagacctgttccgaatgcgacttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 ggagtccgttccccattttcatcaaagcccgcagatagacctgttccgaatgcgacttta 625
Query: 481 caagttactggtgctgttggttggcggagagaaggccttgcgtacaaaaagaatgaggtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 caagttactggtgctgttggttggcggagagaaggccttgcgtacaaaaagaatgaggtc 685
Query: 541 ttcctagatatcgtggaaagtgtaaatcttcttatgtcttcaaaaggtgtcgttctgcgt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 ttcctagatatcgtggaaagtgtaaatcttcttatgtcttcaaaaggtgtcgttctgcgt 745
Query: 601 tgtgatgtgacggggaagattcttatgaagtgctttctttctggaatgcctgatttgaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 tgtgatgtgacggggaagattcttatgaagtgctttctttctggaatgcctgatttgaag 805
Query: 661 ttgggtttgaatgataagattggtcttgagaaagagtcacagattaaatcccgtcctaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ttgggtttgaatgataagattggtcttgagaaagagtcacagattaaatcccgtcctaca 865
Query: 721 aaaagtggtaaaactattgagcttgatgatgtcactttccatcaatgtgtaaatttgacg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 aaaagtggtaaaactattgagcttgatgatgtcactttccatcaatgtgtaaatttgacg 925
Query: 781 aggttcaactcagagaaaactgttagttttgtgccacctgatggtgaatttgaactaatg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 926 aggttcaactcagagaaaactgttagttttgtgccacctgatggtgaatttgaactaatg 985
Query: 841 aagtatcgtatcactgaaggtgttaatcttcccttcaaagttttgcctaccatcaaggaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986 aagtatcgtatcactgaaggtgttaatcttcccttcaaagttttgcctaccatcaaggaa 1045
Query: 901 ctaggccgaacacggatggaagtaaatgttaaggtaaagagtgtctttggtgcaaagatg 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1046 ctaggccgaacacggatggaagtaaatgttaaggtaaagagtgtctttggtgcaaagatg 1105
Query: 961 tttgcactaggggttgttgtcaaaattcctgtgccaaaacaaacagcaaaaacgaatttc 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1106 tttgcactaggggttgttgtcaaaattcctgtgccaaaacaaacagcaaaaacgaatttc 1165
Query: 1021 acagtcacatctggccgtgcgaaatataatgcatctattgattgtttggtttggaagata 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1166 acagtcacatctggccgtgcgaaatataatgcatctattgattgtttggtttggaagata 1225
Query: 1081 agaaaatttcctgggcaaactgagcctaccttgagtgcagaagttgagcttatttccacg 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1226 agaaaatttcctgggcaaactgagcctaccttgagtgcagaagttgagcttatttccacg 1285
Query: 1141 atgacagaaaagaaatcttggactaggccaccaattcagatggagtttcaggttcccatg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1286 atgacagaaaagaaatcttggactaggccaccaattcagatggagtttcaggttcccatg 1345
Query: 1201 ttcacggcatctggtttacgtgttcgtttcctgaaggtctgggagaagagcggatacaac 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1346 ttcacggcatctggtttacgtgttcgtttcctgaaggtctgggagaagagcggatacaac 1405
Query: 1261 accgtggagtgggttcgttatattacaaaagcaggatcatatgagattaggtgctagaca 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1406 accgtggagtgggttcgttatattacaaaagcaggatcatatgagattaggtgctagaca 1465
>gnl|LJGI|TC66743 homologue to UniRef100_A7PCC1 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (43%)
Length = 791
Score = 1055 bits (532), Expect = 0.0
Identities = 572/579 (98%), Gaps = 6/579 (1%)
Strand = Plus / Plus
Query: 1 atgccggtggctgcttccgctatatacttcctcaacctccgcggagatgttctcatcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 atgccggtggctgcttccgctatatacttcctcaacctccgcggagatgttctcatcaat 278
Query: 61 cgcctctatcgagacgatgtcgggggaaatatggttgatgcttttcggacgcatataatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 cgcctctatcgagacgatgtcgggggaaatatggttgatgcttttcggacgcatataatg 338
Query: 121 caaaccaaagaactcggtacctgtcctgtgaagcagattggtggctgctctttcttttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 caaaccaaagaactcggtacctgtcctgtgaagcagattggtggctgctctttcttttac 398
Query: 181 atgaggatcagcaatgtctacatcgtcattgttgtcagcagcaatgctaatgtagcttgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 399 atgaggatcagcaatgtctacatcgtcattgttgtcagcagcaatgctaatgtagcttgc 458
Query: 241 gctttcaagtttgttgttgaggctgttgcacttttcaaatcatattttggcggcgctttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gctttcaagtttgttgttgaggctgttgcacttttcaaatcatattttggcggcgctttt 518
Query: 301 gatgaggatgcaatccgcaataattttgtactcatttatgagcttctagatgaaatcatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gatgaggatgcaatccgcaataattttgtactcatttatgagcttctagatgaaatcatg 578
Query: 361 gactttggctatcctcaaaatctttcaccggagatcttaaagctttatatcactcaggaa 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 579 gactttggctatcctcaaaatctttcaccggagatcttaaagctttatatcactca-gaa 637
Query: 421 ggagtccgttccccattttcatcaaagcccgcagatagacctgttccgaatgcgacttta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ggagtccgttccccattttcatcaaagcccgcagatagacctgttccgaatgcgacttta 697
Query: 481 caagttactggtgctgttggttggcggagagaaggccttgcgtacaaaaagaatgaggtc 540
| ||||||||||||||||||||||||||||||| ||||||||||||||| |||| |||
Sbjct: 698 c-agttactggtgctgttggttggcggagagaa-gccttgcgtacaaaa--gatga-gtc 752
Query: 541 ttcctagatatcgtggaaagtgtaaatcttcttatgtct 579
|||||||||||||||||||||||||||||||||||||||
Sbjct: 753 ttcctagatatcgtggaaagtgtaaatcttcttatgtct 791
>gnl|LJGI|TC74197 homologue to UniRef100_A7PCC1 Cluster: Chromosome chr2 scaffold_11,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr2 scaffold_11, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (19%)
Length = 737
Score = 484 bits (244), Expect = e-136
Identities = 244/244 (100%)
Strand = Plus / Plus
Query: 1077 gataagaaaatttcctgggcaaactgagcctaccttgagtgcagaagttgagcttatttc 1136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 gataagaaaatttcctgggcaaactgagcctaccttgagtgcagaagttgagcttatttc 186
Query: 1137 cacgatgacagaaaagaaatcttggactaggccaccaattcagatggagtttcaggttcc 1196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 187 cacgatgacagaaaagaaatcttggactaggccaccaattcagatggagtttcaggttcc 246
Query: 1197 catgttcacggcatctggtttacgtgttcgtttcctgaaggtctgggagaagagcggata 1256
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 catgttcacggcatctggtttacgtgttcgtttcctgaaggtctgggagaagagcggata 306
Query: 1257 caacaccgtggagtgggttcgttatattacaaaagcaggatcatatgagattaggtgcta 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 caacaccgtggagtgggttcgttatattacaaaagcaggatcatatgagattaggtgcta 366
Query: 1317 gaca 1320
||||
Sbjct: 367 gaca 370