Miyakogusa Predicted Gene

Lj2g3v1984720.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj2g3v1984720.1 Non Chatacterized Hit- tr|O49683|O49683_ARATH
Putative uncharacterized protein AT4g17840
OS=Arabidop,57.28,3e-18,seg,NULL; coiled-coil,NULL,CUFF.38235.1
         (316 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC71662 similar to UniRef100_A7PC94 Cluster: Chromosome...   293   3e-79
gnl|LJGI|TC61697 homologue to UniRef100_A7PC94 Cluster: Chromoso...   293   3e-79

>gnl|LJGI|TC71662 similar to UniRef100_A7PC94 Cluster: Chromosome chr2 scaffold_11,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr2 scaffold_11, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (76%)
          Length = 1359

 Score =  293 bits (148), Expect = 3e-79
 Identities = 148/148 (100%)
 Strand = Plus / Plus

                                                                        
Query: 169  acgaataacattcttgctcccattatcacacatggcatatactccacagttatattggga 228
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1045 acgaataacattcttgctcccattatcacacatggcatatactccacagttatattggga 1104

                                                                        
Query: 229  catggcctttggaagataaacgaccaccggcgaagactacgtcaaagaatccaacagctc 288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1105 catggcctttggaagataaacgaccaccggcgaagactacgtcaaagaatccaacagctc 1164

                                        
Query: 289  aaatctgaagaacaaaattccaagtaga 316
            ||||||||||||||||||||||||||||
Sbjct: 1165 aaatctgaagaacaaaattccaagtaga 1192



 Score =  117 bits (59), Expect = 4e-26
 Identities = 59/59 (100%)
 Strand = Plus / Plus

                                                                       
Query: 11   tatattcaccacttctggaaggactactagctctctacctaggatttgagtggatccaa 69
            |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 986  tatattcaccacttctggaaggactactagctctctacctaggatttgagtggatccaa 1044


>gnl|LJGI|TC61697 homologue to UniRef100_A7PC94 Cluster: Chromosome chr2 scaffold_11,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr2 scaffold_11, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (47%)
          Length = 761

 Score =  293 bits (148), Expect = 3e-79
 Identities = 148/148 (100%)
 Strand = Plus / Plus

                                                                       
Query: 169 acgaataacattcttgctcccattatcacacatggcatatactccacagttatattggga 228
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 acgaataacattcttgctcccattatcacacatggcatatactccacagttatattggga 451

                                                                       
Query: 229 catggcctttggaagataaacgaccaccggcgaagactacgtcaaagaatccaacagctc 288
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 catggcctttggaagataaacgaccaccggcgaagactacgtcaaagaatccaacagctc 511

                                       
Query: 289 aaatctgaagaacaaaattccaagtaga 316
           ||||||||||||||||||||||||||||
Sbjct: 512 aaatctgaagaacaaaattccaagtaga 539



 Score =  117 bits (59), Expect = 4e-26
 Identities = 59/59 (100%)
 Strand = Plus / Plus

                                                                      
Query: 11  tatattcaccacttctggaaggactactagctctctacctaggatttgagtggatccaa 69
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 tatattcaccacttctggaaggactactagctctctacctaggatttgagtggatccaa 391