Miyakogusa Predicted Gene
- Lj2g3v1984620.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1984620.1 Non Chatacterized Hit- tr|C0JP22|C0JP22_LOTJA
Putative basic helix-loop-helix protein BHLH17 OS=Lotu,95.29,0,no
description,Helix-loop-helix domain; seg,NULL; HLH, helix-loop-helix
DNA-binding domain,Helix-loo,CUFF.38202.1
(1101 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67128 weakly similar to UniRef100_A7R3V3 Cluster: Chr... 2183 0.0
gnl|LJGI|BP068691 similar to UniRef100_A7QZG4 Cluster: Chromosom... 587 e-167
gnl|LJGI|AV772700 70 3e-11
gnl|LJGI|TC73883 similar to UniRef100_Q1PF17 Cluster: Basic heli... 58 1e-07
gnl|LJGI|TC71042 similar to UniRef100_O81348 Cluster: Symbiotic ... 56 5e-07
>gnl|LJGI|TC67128 weakly similar to UniRef100_A7R3V3 Cluster: Chromosome chr7
scaffold_572, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_572, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (71%)
Length = 1601
Score = 2183 bits (1101), Expect = 0.0
Identities = 1101/1101 (100%)
Strand = Plus / Plus
Query: 1 atggagaaactaaacacaccaacagaggcatcatcatcttgctggttatctgatttgcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 atggagaaactaaacacaccaacagaggcatcatcatcttgctggttatctgatttgcta 121
Query: 61 ttgcaggaaatggatgattgcaattttttccaacaatgcaatccgaacttgcttggcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ttgcaggaaatggatgattgcaattttttccaacaatgcaatccgaacttgcttggcgat 181
Query: 121 gaagagtttctttcacatgatatagtgagtgcttttcagagtgacaatttgcaacaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gaagagtttctttcacatgatatagtgagtgcttttcagagtgacaatttgcaacaacaa 241
Query: 181 caacaacctctgtcttctgagagttactcttcttaccctgtttcaaattctgagactgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caacaacctctgtcttctgagagttactcttcttaccctgtttcaaattctgagactgtg 301
Query: 241 tggaattcttccactgatgaaacgtgttttgagagacccgctaagcagcagaaaaccaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tggaattcttccactgatgaaacgtgttttgagagacccgctaagcagcagaaaaccaaa 361
Query: 301 cacgttttaccagatcaatccaactcttcttcaccttcttcacctacctctcagatcctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 cacgttttaccagatcaatccaactcttcttcaccttcttcacctacctctcagatcctg 421
Query: 361 tcctttgagaacacccatctttatggcttagattgtagcttgaacccgaatttgcagaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcctttgagaacacccatctttatggcttagattgtagcttgaacccgaatttgcagaac 481
Query: 421 gagggtgtttcagtttcaacaccccaactgcggaatgtgaattttccagcacaaaatcga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gagggtgtttcagtttcaacaccccaactgcggaatgtgaattttccagcacaaaatcga 541
Query: 481 aaagggtcaacacaaaatcaaaactttgaaaccataacaaaccctcaaggaaaaggtagc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aaagggtcaacacaaaatcaaaactttgaaaccataacaaaccctcaaggaaaaggtagc 601
Query: 541 aagaaatcacatggtcaggatcacatcatagctgagagaaggcgtagagagaagctcagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aagaaatcacatggtcaggatcacatcatagctgagagaaggcgtagagagaagctcagc 661
Query: 601 cagagcttaattgctcttgcagcccttattcctggtttaaagaagatggacaaggcttca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cagagcttaattgctcttgcagcccttattcctggtttaaagaagatggacaaggcttca 721
Query: 661 gtccttggagacgctatcaagtacgtgaaagtgcttaaagagcgtttgaggttactggaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 gtccttggagacgctatcaagtacgtgaaagtgcttaaagagcgtttgaggttactggaa 781
Query: 721 gaacagaacaagaacagagcaatggaatctgtggtggtggttaacaaaccacaaatcagc 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 gaacagaacaagaacagagcaatggaatctgtggtggtggttaacaaaccacaaatcagc 841
Query: 781 aacgatgataattcatcatcctcatgcgatgatggtaccattattgggagtgaagaagct 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 aacgatgataattcatcatcctcatgcgatgatggtaccattattgggagtgaagaagct 901
Query: 841 ctcccccatgttgaagcaagagtgtcagagaaggacgtgctcctccgattacactgcaaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 ctcccccatgttgaagcaagagtgtcagagaaggacgtgctcctccgattacactgcaaa 961
Query: 901 aagcaaaaggggcttttgctgaaaatattgtttgagattcaaaaccttcatctctttgtc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 962 aagcaaaaggggcttttgctgaaaatattgtttgagattcaaaaccttcatctctttgtc 1021
Query: 961 gtcaatagcagtgtccttccttttggagattccatccttgacattacaattgttgctcag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1022 gtcaatagcagtgtccttccttttggagattccatccttgacattacaattgttgctcag 1081
Query: 1021 atgggagcagaatacaacttgaccataaacgaactagtaaaaaatttgcgagtggctgca 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1082 atgggagcagaatacaacttgaccataaacgaactagtaaaaaatttgcgagtggctgca 1141
Query: 1081 ttgagatccatgtcttcataa 1101
|||||||||||||||||||||
Sbjct: 1142 ttgagatccatgtcttcataa 1162
>gnl|LJGI|BP068691 similar to UniRef100_A7QZG4 Cluster: Chromosome chr7 scaffold_275,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_275, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 500
Score = 587 bits (296), Expect = e-167
Identities = 326/336 (97%)
Strand = Plus / Minus
Query: 685 gtgaaagtgcttaaagagcgtttgaggttactggaagaacagaacaagaacagagcaatg 744
||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||
Sbjct: 500 gtgaaagtgcttaaagagcgtttgaggttactggaagaacagaaccagcacagagccatg 441
Query: 745 gaatctgtggtggtggttaacaaaccacaaatcagcaacgatgataattcatcatcctca 804
||||||||| ||||||||||||| | |||||||||||||||||||||||||||||||||
Sbjct: 440 gaatctgtgttggtggttaacaaccaccaaatcagcaacgatgataattcatcatcctca 381
Query: 805 tgcgatgatggtaccattattgggagtgaagaagctctcccccatgttgaagcaagagtg 864
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 380 tgcgatgatggtaccattattgggagtgaagaagctctcccccatcttgaagcaagagtg 321
Query: 865 tcagagaaggacgtgctcctccgattacactgcaaaaagcaaaaggggcttttgctgaaa 924
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 320 tcagagaaggacgtgctcctccgattacactgccaaaagcaaaaggggcttttgctgaaa 261
Query: 925 atattgtttgagattcaaaaccttcatctctttgtcgtcaatagcagtgtccttcctttt 984
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atattgtttgagattcaaaaccttcatctctttgtcgtcaatagcagtgtccttcctttt 201
Query: 985 ggagattccatccttgacattacaattgttgctcag 1020
||||||||||||||||||||||| ||||||||||||
Sbjct: 200 ggagattccatccttgacattaccattgttgctcag 165
>gnl|LJGI|AV772700
Length = 508
Score = 69.9 bits (35), Expect = 3e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 1065 tttgcgagtggctgcattgagatccatgtcttcat 1099
|||||||||||||||||||||||||||||||||||
Sbjct: 508 tttgcgagtggctgcattgagatccatgtcttcat 474
>gnl|LJGI|TC73883 similar to UniRef100_Q1PF17 Cluster: Basic helix-loop-helix family
protein; n=2; Arabidopsis thaliana|Rep: Basic
helix-loop-helix family protein - Arabidopsis thaliana
(Mouse-ear cress), partial (14%)
Length = 644
Score = 58.0 bits (29), Expect = 1e-07
Identities = 83/101 (82%)
Strand = Plus / Plus
Query: 559 gatcacatcatagctgagagaaggcgtagagagaagctcagccagagcttaattgctctt 618
|||||||| || |||||||||| | | ||||| ||| | |||||| || |||||||||
Sbjct: 540 gatcacataattgctgagagaaagaggagagaaaagattagccagcagttcattgctctt 599
Query: 619 gcagcccttattcctggtttaaagaagatggacaaggcttc 659
||||||||||||| || || || |||||||| ||||||||
Sbjct: 600 tcagcccttattccaggcttcaaaaagatggataaggcttc 640
>gnl|LJGI|TC71042 similar to UniRef100_O81348 Cluster: Symbiotic ammonium
transporter; n=1; Glycine max|Rep: Symbiotic ammonium
transporter - Glycine max (Soybean), partial (50%)
Length = 1031
Score = 56.0 bits (28), Expect = 5e-07
Identities = 110/136 (80%), Gaps = 1/136 (0%)
Strand = Plus / Plus
Query: 555 tcaggatcacatcatagctgagagaaggcgtagagagaagctcagccagagcttaattgc 614
|||||| ||||| |||||||| |||| ||| ||||||||||||||||| || |||||
Sbjct: 453 tcaggaccacattatagctgaaagaaagcggcgagagaagctcagccagcagttcattgc 512
Query: 615 tcttgcagcccttattcctggtttaaagaagatggac-aaggcttcagtccttggagacg 673
||| | |||||| | ||||| || | ||||||||| || ||||| || ||||||||
Sbjct: 513 tctatctgcccttgtccctggactacaaaagatggacaaaagcttctgttcttggagata 572
Query: 674 ctatcaagtacgtgaa 689
||||||||||| ||||
Sbjct: 573 ctatcaagtacctgaa 588