Miyakogusa Predicted Gene
- Lj2g3v1984100.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1984100.1 Non Chatacterized Hit- tr|A9NZ33|A9NZ33_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,52.08,2e-18,seg,NULL; ESSS,NADH:ubiquinone oxidoreductase, ESSS
subunit,CUFF.38189.1
(384 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS340886 similar to UniRef100_A7PWA1 Cluster: Chromosom... 753 0.0
gnl|LJGI|TC66169 similar to UniRef100_A7PWA1 Cluster: Chromosome... 252 1e-66
gnl|LJGI|TC63836 similar to UniRef100_A7PWA1 Cluster: Chromosome... 252 1e-66
>gnl|LJGI|FS340886 similar to UniRef100_A7PWA1 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 668
Score = 753 bits (380), Expect = 0.0
Identities = 383/384 (99%)
Strand = Plus / Plus
Query: 1 atgccaaccccaacaccgttaagcagcgcctccgccatgctccgccggcgtctcctccca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atgccaaccccaacaccgttaagcagcgcctccgccatgctccgccggcgtctcctccca 120
Query: 61 tcacttcgaacccgcggcggttcctcctcccggtggacgagtgcaggccatgaggagcat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tcacttcgaacccgcggcggttcctcctcccggtggacgagtgcaggccatgaggagcat 180
Query: 121 ccgaaggggtacctcttcaaccggactccactagcaccgtgggagtctcgctcatgggaa 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 acgaaggggtacctcttcaaccggactccactagcaccgtgggagtctcgctcatgggaa 240
Query: 181 gattgggaactcccctgctacatcaccagcttcctcaccatcgtgatcttgggcgttggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gattgggaactcccctgctacatcaccagcttcctcaccatcgtgatcttgggcgttggt 300
Query: 241 ctcaacgccaagcccgatttgaccatggaaacctgggcccacgagaaagctcttgaacgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctcaacgccaagcccgatttgaccatggaaacctgggcccacgagaaagctcttgaacgc 360
Query: 301 ctcaggatggagaacaacctcaccgctggatccactgaattgctgaataatcaggattgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctcaggatggagaacaacctcaccgctggatccactgaattgctgaataatcaggattgc 420
Query: 361 aaggatgaacaaggggaagagtga 384
||||||||||||||||||||||||
Sbjct: 421 aaggatgaacaaggggaagagtga 444
>gnl|LJGI|TC66169 similar to UniRef100_A7PWA1 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 695
Score = 252 bits (127), Expect = 1e-66
Identities = 279/330 (84%), Gaps = 6/330 (1%)
Strand = Plus / Plus
Query: 3 gccaaccccaacaccgttaagcagcgcctccgccatgctccgccggcgtctcctcccatc 62
|||||||||||| |||||||||||||||||||| |||||||||||||| ||| | || ||
Sbjct: 127 gccaaccccaacgccgttaagcagcgcctccgcgatgctccgccggcgcctctttccgtc 186
Query: 63 acttcgaacccgcggcggt------tcctcctcccggtggacgagtgcaggccatgagga 116
|| ||||| |||||||| |||||||||||||||||||| || ||||| |||||
Sbjct: 187 gctccgaacacgcggcggcgggtcgtcctcctcccggtggacgagcgcgggccacgagga 246
Query: 117 gcatccgaaggggtacctcttcaaccggactccactagcaccgtgggagtctcgctcatg 176
|||||| ||||||| | |||||| ||||| || | | |||| | || |||||| ||
Sbjct: 247 gcatcccaaggggttacccttcaatcggacaccgccaccaccaggagaatctcgcaagtg 306
Query: 177 ggaagattgggaactcccctgctacatcaccagcttcctcaccatcgtgatcttgggcgt 236
||||||||||||||| || |||||||||||||||||||||||||||||||| | |||||
Sbjct: 307 ggaagattgggaacttccatgctacatcaccagcttcctcaccatcgtgattctcggcgt 366
Query: 237 tggtctcaacgccaagcccgatttgaccatggaaacctgggcccacgagaaagctcttga 296
||||||||| || ||||||||||||||||| ||||||||||| || |||||||| |||||
Sbjct: 367 tggtctcaatgctaagcccgatttgaccatcgaaacctgggcacatgagaaagcccttga 426
Query: 297 acgcctcaggatggagaacaacctcaccgc 326
|| ||||||||||||| || |||| ||||
Sbjct: 427 gcgtctcaggatggagagcagcctcgccgc 456
>gnl|LJGI|TC63836 similar to UniRef100_A7PWA1 Cluster: Chromosome chr8 scaffold_34,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_34, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (72%)
Length = 719
Score = 252 bits (127), Expect = 1e-66
Identities = 279/330 (84%), Gaps = 6/330 (1%)
Strand = Plus / Plus
Query: 3 gccaaccccaacaccgttaagcagcgcctccgccatgctccgccggcgtctcctcccatc 62
|||||||||||| |||||||||||||||||||| |||||||||||||| ||| | || ||
Sbjct: 88 gccaaccccaacgccgttaagcagcgcctccgcgatgctccgccggcgcctctttccgtc 147
Query: 63 acttcgaacccgcggcggt------tcctcctcccggtggacgagtgcaggccatgagga 116
|| ||||| |||||||| |||||||||||||||||||| || ||||| |||||
Sbjct: 148 gctccgaacacgcggcggcgggtcgtcctcctcccggtggacgagcgcgggccacgagga 207
Query: 117 gcatccgaaggggtacctcttcaaccggactccactagcaccgtgggagtctcgctcatg 176
|||||| ||||||| | |||||| ||||| || | | |||| | || |||||| ||
Sbjct: 208 gcatcccaaggggttacccttcaatcggacaccgccaccaccaggagaatctcgcaagtg 267
Query: 177 ggaagattgggaactcccctgctacatcaccagcttcctcaccatcgtgatcttgggcgt 236
||||||||||||||| || |||||||||||||||||||||||||||||||| | |||||
Sbjct: 268 ggaagattgggaacttccatgctacatcaccagcttcctcaccatcgtgattctcggcgt 327
Query: 237 tggtctcaacgccaagcccgatttgaccatggaaacctgggcccacgagaaagctcttga 296
||||||||| || ||||||||||||||||| ||||||||||| || |||||||| |||||
Sbjct: 328 tggtctcaatgctaagcccgatttgaccatcgaaacctgggcacatgagaaagcccttga 387
Query: 297 acgcctcaggatggagaacaacctcaccgc 326
|| ||||||||||||| || |||| ||||
Sbjct: 388 gcgtctcaggatggagagcagcctcgccgc 417