Miyakogusa Predicted Gene
- Lj2g3v1983990.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1983990.1 tr|I3S9H6|I3S9H6_LOTJA Branched-chain-amino-acid
aminotransferase OS=Lotus japonicus PE=2 SV=1,98.54,0,BRANCHED-CHAIN
AMINO ACID AMINOTRANSFERASE,Branched-chain amino acid aminotransferase
II; SUBGROUP I,CUFF.38194.1
(1236 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66883 similar to UniRef100_Q9SNY8 Cluster: Branched-c... 1281 0.0
gnl|LJGI|TC79702 922 0.0
gnl|LJGI|TC74143 similar to UniRef100_A7QZI3 Cluster: Chromosome... 636 0.0
gnl|LJGI|BP060715 58 1e-07
gnl|LJGI|AV414233 weakly similar to UniRef100_Q54H37 Cluster: G-... 54 2e-06
gnl|LJGI|TC77803 similar to UniRef100_A7QY41 Cluster: Chromosome... 54 2e-06
gnl|LJGI|TC70183 homologue to UniRef100_Q70I39 Cluster: Coatomer... 54 2e-06
gnl|LJGI|TC63407 homologue to UniRef100_Q70I39 Cluster: Coatomer... 54 2e-06
>gnl|LJGI|TC66883 similar to UniRef100_Q9SNY8 Cluster: Branched-chain amino acid
aminotransferase; n=1; Solanum tuberosum|Rep:
Branched-chain amino acid aminotransferase - Solanum
tuberosum (Potato), partial (37%)
Length = 742
Score = 1281 bits (646), Expect = 0.0
Identities = 660/662 (99%), Gaps = 2/662 (0%)
Strand = Plus / Plus
Query: 1 atggagtccagcgccgtccatgcagccaccattcgactcactcacccgatctcttcatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 83 atggagtccagcgccgtccatgcagccaccattcgactcactcacccgatctcttcatca 142
Query: 61 cgcccttttctctcccacccattcaaaccctccaatctcaatctcaatctcaatctcaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 cgcccttttctctcccacccattcaaaccctccaatctcaatctcaatctcaatctcaag 202
Query: 121 cttcaacacaagtttcctctcgcttctcacaatcccagtcttctccaaccactttccgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 cttcaacacaagtttcctctcgcttctcacaatcccagtcttctccaaccactttccgcc 262
Query: 181 actctttctgatgcccacagtgaaactgaaaacgtggagttagcggacttagattgggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 actctttctgatgcccacagtgaaactgaaaacgtggagttagcggacttagattgggac 322
Query: 241 aatctcggattcggacttcaaactactgattacatgtatgtcatgaagtgcccgcatggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 aatctcggattcggacttcaaactactgattacatgtatgtcatgaagtgcccgcatggt 382
Query: 301 gcagagggagttttctccaagggtgaactcaagcgctttgggaacattgaattgaacccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gcagagggagttttctccaagggtgaactcaagcgctttgggaacattgaattgaacccc 442
Query: 361 tccgccggagttttgaactatggccaggggttatttgagggcttgaaagcctaccggaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tccgccggagttttgaactatggccaggggttatttgagggcttgaaagcctaccggaaa 502
Query: 421 catgatggcaatatactcctcttccgtccacaagaaaatgccttgcggatgaggatgggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 catgatggcaatatactcctcttccgtccacaagaaaatgccttgcggatgaggatgggt 562
Query: 481 gcggagcggatgtgcatgccttcacctaccgtggagcagtttgtggaagctgtgaaggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gcggagcggatgtgcatgccttcacctaccgtggagcagtttgtggaagctgtgaaggag 622
Query: 541 actgttttagcaaataaacgttgggttccccctccaggtaaaggctccttgtatattaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 actgttttagcaaataaacgttgggttccccctccaggtaaaggctccttgtatattaga 682
Query: 601 ccattgctaatgggaagtggacctgtacttggtcttgcacctgctccggagtacaccttt 660
||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 683 ccattgctaatgggaagtgga-ctgtacttggtcttgca-ctgctccggagtacaccttt 740
Query: 661 ct 662
||
Sbjct: 741 ct 742
>gnl|LJGI|TC79702
Length = 580
Score = 922 bits (465), Expect = 0.0
Identities = 490/499 (98%), Gaps = 6/499 (1%)
Strand = Plus / Plus
Query: 1 atggagtccagcgccgtccatgcagccaccattcgactcactcacccgatctcttcatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 atggagtccagcgccgtccatgcagccaccattcgactcactcacccgatctcttcatca 141
Query: 61 cgcccttttctctcccacccattcaaaccctccaat------ctcaatctcaatctcaat 114
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 142 cgcccttttctctcccacccattcaaaccctccaatctcaatctcaatctcaatctcaat 201
Query: 115 ctcaagcttcaacacaagtttcctctcgcttctcacaatcccagtcttctccaaccactt 174
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 202 ctcaagcttcaacacaagtttcctctcgcttctcacaatcccagacttctccaaccactt 261
Query: 175 tccgccactctttctgatgcccacagtgaaactgaaaacgtggagttagcggacttagat 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tccgccactctttctgatgcccacagtgaaactgaaaacgtggagttagcggacttagat 321
Query: 235 tgggacaatctcggattcggacttcaaactactgattacatgtatgtcatgaagtgcccg 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgggacaatctcggattcggacttcaaactactgattacatgtatgtcatgaagtgcccg 381
Query: 295 catggtgcagagggagttttctccaagggtgaactcaagcgctttgggaacattgaattg 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 catggtgcagagggagttttctccaagggtgaactcaagcgctttgggaacattgaattg 441
Query: 355 aacccctccgccggagttttgaactatggccaggggttatttgagggcttgaaagcctac 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 aacccctccgccggagttttgaactatggccaggggttatttgagggcttgaaagcctac 501
Query: 415 cggaaacatgatggcaatatactcctcttccgtccacaagaaaatgccttgcggatgagg 474
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 502 cggaaacatgatggcaatatactcctctttcgtccacaagaaaatgccttgcggatgang 561
Query: 475 atgggtgcggagcggatgt 493
|||||||||||||||||||
Sbjct: 562 atgggtgcggagcggatgt 580
>gnl|LJGI|TC74143 similar to UniRef100_A7QZI3 Cluster: Chromosome chr7 scaffold_275,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_275, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (32%)
Length = 569
Score = 636 bits (321), Expect = 0.0
Identities = 321/321 (100%)
Strand = Plus / Plus
Query: 916 aacgtcatttcaactcctgctgttaaaggaactatcctacctggcattactcgaaaaagt 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aacgtcatttcaactcctgctgttaaaggaactatcctacctggcattactcgaaaaagt 60
Query: 976 ataattgatgttggtcgaagccaagggttccaggttgaggagcgactagtgtcagtggat 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ataattgatgttggtcgaagccaagggttccaggttgaggagcgactagtgtcagtggat 120
Query: 1036 gaattgctagatgctgatgaggttttctgcacgggaacagctgtggttgtatcacctgtt 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gaattgctagatgctgatgaggttttctgcacgggaacagctgtggttgtatcacctgtt 180
Query: 1096 ggcagtgtcacttatctcggcgatagggtatcatatagagacggtgttggagcggtttca 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ggcagtgtcacttatctcggcgatagggtatcatatagagacggtgttggagcggtttca 240
Query: 1156 cagcaactttatactgctcttacgagactacagatgggtcttgcggaggatgagatgaac 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 cagcaactttatactgctcttacgagactacagatgggtcttgcggaggatgagatgaac 300
Query: 1216 tggactgttgaactgagataa 1236
|||||||||||||||||||||
Sbjct: 301 tggactgttgaactgagataa 321
>gnl|LJGI|BP060715
Length = 323
Score = 58.0 bits (29), Expect = 1e-07
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 1208 agatgaactggactgttgaactgagataa 1236
|||||||||||||||||||||||||||||
Sbjct: 323 agatgaactggactgttgaactgagataa 295
>gnl|LJGI|AV414233 weakly similar to UniRef100_Q54H37 Cluster: G-protein-coupled
receptor (GPCR) family protein; n=1; Dictyostelium
discoideum|Rep:, partial (4%)
Length = 200
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 93 caatctcaatctcaatctcaatctcaa 119
|||||||||||||||||||||||||||
Sbjct: 94 caatctcaatctcaatctcaatctcaa 120
>gnl|LJGI|TC77803 similar to UniRef100_A7QY41 Cluster: Chromosome undetermined
scaffold_237, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_237,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (33%)
Length = 1139
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 93 caatctcaatctcaatctcaatctcaa 119
|||||||||||||||||||||||||||
Sbjct: 5 caatctcaatctcaatctcaatctcaa 31
>gnl|LJGI|TC70183 homologue to UniRef100_Q70I39 Cluster: Coatomer alpha subunit-like
protein; n=1; Lotus japonicus|Rep: Coatomer alpha
subunit-like protein - Lotus japonicus, partial (8%)
Length = 953
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 93 caatctcaatctcaatctcaatctcaa 119
|||||||||||||||||||||||||||
Sbjct: 47 caatctcaatctcaatctcaatctcaa 73
>gnl|LJGI|TC63407 homologue to UniRef100_Q70I39 Cluster: Coatomer alpha subunit-like
protein; n=1; Lotus japonicus|Rep: Coatomer alpha
subunit-like protein - Lotus japonicus, partial (32%)
Length = 1402
Score = 54.0 bits (27), Expect = 2e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 93 caatctcaatctcaatctcaatctcaa 119
|||||||||||||||||||||||||||
Sbjct: 44 caatctcaatctcaatctcaatctcaa 70