Miyakogusa Predicted Gene
- Lj2g3v1981870.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1981870.1 tr|C6FDB1|C6FDB1_9CONI Phloem protein (Fragment)
OS=Pseudotsuga macrocarpa PE=4 SV=1,40.83,2e-18,seg,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY NOT NAMED,NULL,CUFF.38155.1
(1273 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC74636 similar to UniRef100_A7NUB5 Cluster: Chromosome... 1350 0.0
gnl|LJGI|TC79429 similar to UniRef100_A7NUB5 Cluster: Chromosome... 1063 0.0
gnl|LJGI|TC64808 weakly similar to UniRef100_Q9SY57 Cluster: Pro... 62 9e-09
>gnl|LJGI|TC74636 similar to UniRef100_A7NUB5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 849
Score = 1350 bits (681), Expect = 0.0
Identities = 690/693 (99%)
Strand = Plus / Plus
Query: 1 atggaactgcaatttcgattaccagaattgcaattagttgaaaagggttttgattacatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 atggaactgcaatttcgattaccagaattgcaattagttgaaaagggttttgattacatc 216
Query: 61 cgtaaaaggaagaaatggatcttcatttccgttgcattagggttctgcgcttacagtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 cgtaaaaggaagaaatggatcttcatttccgttgcattagggttctgcgcttacagtgct 276
Query: 121 tatcacgctccctccatagctcgcaagagaaggaagctttccaagcttctcggtgccttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tatcacgctccctccatagctcgcaagagaaggaagctttccaagcttctcggtgccttg 336
Query: 181 ttttctgtagcagaagccgtagcagaatccgcagacaccatcggagttatctccagagac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ttttctgtagcagaagccgtagcagaatccgcagacaccatcggagttatctccagagac 396
Query: 241 atgaaggagtttctgcaatctgattcggatcaagtgccaaagagcctcaaccaaatttcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 atgaaggagtttctgcaatctgattcggatcaagtgccaaagagcctcaaccaaatttcc 456
Query: 301 aaggtagctcgctctcagcacttctccgattctcttaccaccgtcacccatgccgtaact 360
|||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 457 aaggtagctcgctctcagcaattctccgattctcttaccaccgtaacccatgccgtaact 516
Query: 361 gtaggtgtcttgcgcggtaaccaatccgcgaaccggaccggcgccgagcaaactggcgcc 420
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gtaggtgtattgcgcggtaaccaatccgcgaaccggaccggcgccgagcaaactggcgcc 576
Query: 421 ggttcgagcgtcgtggatggtgttcttgacaagctgttaacaccggaggggtcagggttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ggttcgagcgtcgtggatggtgttcttgacaagctgttaacaccggaggggtcagggttt 636
Query: 481 gcttctgtggttcttggaagctttgctaggaacctggttctggcgttttattgttcagat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 gcttctgtggttcttggaagctttgctaggaacctggttctggcgttttattgttcagat 696
Query: 541 ggtgttcaatctcatgacgaattcggcggagaatccaattcaagcggtgtgggaaatgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 ggtgttcaatctcatgacgaattcggcggagaatccaattcaagcggtgtgggaaatgct 756
Query: 601 tcctccaattcagattctgttcctgcatgggttgatgctgtttgtgatgaaaggtgcggg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 tcctccaattcagattctgttcctgcatgggttgatgctgtttgtgatgaaaggtgcggg 816
Query: 661 gaattgattgggaattgcgttcaattgttcgtg 693
|||||||||||||||||||||||||||||||||
Sbjct: 817 gaattgattgggaattgcgttcaattgttcgtg 849
>gnl|LJGI|TC79429 similar to UniRef100_A7NUB5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 1142
Score = 1063 bits (536), Expect = 0.0
Identities = 551/556 (99%)
Strand = Plus / Plus
Query: 718 gacaagactatgcatatcaacacctatgatcaattctttgctggtttaactaaccccaag 777
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gacaagactatgcatatcaacacctatgatcaattctttgctggtttaactaaccccaag 60
Query: 778 catgaggatagtgtgagagatatgttgatgtctgtttgtaatggtgctattgagagtttt 837
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 catgaggatagtgtgagagatatgttgatgtctgtttgtaatggtgctattgagagtttt 120
Query: 838 gttaaaacatctcaccatgtgttgacaagtgcaaaacccggtgatggttcaggttcagat 897
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gttaaaacatctcaccatgtgttgacaagtgcaaaacccggtgatggttcaggttcagat 180
Query: 898 tctaatttggatattggggaaactactccgaatcgtgtagagacatcaacaatggaatca 957
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctaatttggatattggggaaactactccgaatcgtgtagagacatcaacaatggaatca 240
Query: 958 aagggaggggatgtttgtgttgaggaaaataagagtggatgggtcagtaaggtttcatcc 1017
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aagggaggggatgtttgtgttgaggaaaataagagtggatgggtcagtaaggtttcatcc 300
Query: 1018 acattggcaattcccagcaataggaggcttgttcttgatgtgaccgggagggtgacgttt 1077
|||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acattggccattcccagccataggaggcttgttcttgatgtgaccgggagggtgacgttt 360
Query: 1078 gagacggttaggtctttcatggagtttgttttgaaaacattgtgtgcttctgtgagaaga 1137
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 361 gagacggttaggtctttcatggagtttgttttgaaaaccttgtgtgcttctgtgagaaga 420
Query: 1138 tgtgctcatagtgttcacgatgcagtacttgagattatgagatatgctgctgctaaattt 1197
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgtgctcatagtgttcactatgcagtacttgagattatgagatatgctgctgctaaattt 480
Query: 1198 tctgttattgcgacaatttgtatctcattgtgcctgcacgtaatggattgccctagggct 1257
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 tctgttattgcgaccatttgtatctcattgtgcctgcacgtaatggattgccctagggct 540
Query: 1258 ttggtgcctgcttaag 1273
||||||||||||||||
Sbjct: 541 ttggtgcctgcttaag 556
>gnl|LJGI|TC64808 weakly similar to UniRef100_Q9SY57 Cluster: Protein PHLOEM PROTEIN
2-LIKE A10; n=1; Arabidopsis thaliana|Rep: Protein
PHLOEM PROTEIN 2-LIKE A10 - Arabidopsis thaliana
(Mouse-ear cress), partial (67%)
Length = 1475
Score = 61.9 bits (31), Expect = 9e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 691 gtgagcaccgcggttgcggtttttcttgacaagactatgcatatcaacacctatgatcaa 750
|||||||| |||||||| |||||||| || ||||| ||| || |||||||||||||| |
Sbjct: 639 gtgagcactgcggttgctgtttttctggataagacgatggatgtcaacacctatgatgat 698
Query: 751 ttctttgctgg 761
|| ||||||||
Sbjct: 699 ttgtttgctgg 709
Score = 56.0 bits (28), Expect = 6e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 808 tctgtttgtaatggtgctattgagagttttgttaaaacatctcaccatgtgttgac 863
||||| |||||||||||| ||||||| ||||||| || |||||||| ||||||||
Sbjct: 756 tctgtgtgtaatggtgctgttgagagctttgttaggacttctcaccaggtgttgac 811