Miyakogusa Predicted Gene
- Lj2g3v1979690.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj2g3v1979690.1 tr|F2D2B0|F2D2B0_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,28.99,0.0000000000001,DUF2215,Transmembrane protein 194;
seg,NULL; FAMILY NOT NAMED,NULL,CUFF.38136.1
(1476 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80584 weakly similar to UniRef100_A7QZB9 Cluster: Chr... 1699 0.0
gnl|LJGI|FS323590 weakly similar to UniRef100_A7QZB9 Cluster: Ch... 1273 0.0
gnl|LJGI|BW598867 weakly similar to UniRef100_A7QZB9 Cluster: Ch... 176 3e-43
>gnl|LJGI|TC80584 weakly similar to UniRef100_A7QZB9 Cluster: Chromosome chr7
scaffold_270, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_270, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (37%)
Length = 1016
Score = 1699 bits (857), Expect = 0.0
Identities = 860/861 (99%)
Strand = Plus / Plus
Query: 616 attctatatcagggcatgaaacttcttccaactggtcggaagagttcccttgctatattt 675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 attctatatcagggcatgaaacttcttccaactggtcggaagagttcccttgctatattt 61
Query: 676 ttatattcatctgctgttggtttcggtggttttctcctccgttatgttcctgacttaatc 735
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 62 ttatattcatctgctgttggtttcggtggttttctcctccgtcatgttcctgacttaatc 121
Query: 736 cgttcagtacttacggagctaggaattgatcaagacatgtataatcctttggcaatattt 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 cgttcagtacttacggagctaggaattgatcaagacatgtataatcctttggcaatattt 181
Query: 796 ctgctgacttttgtcgcaatagccggagcctggatggggttctgggttgtccataagctt 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ctgctgacttttgtcgcaatagccggagcctggatggggttctgggttgtccataagctt 241
Query: 856 gtcctaaccgaagatggatcagttgacataagcactgctcagtttgttgcatgggccata 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtcctaaccgaagatggatcagttgacataagcactgctcagtttgttgcatgggccata 301
Query: 916 aggattttggcagtcattatgattcttcagagttctatggatcctctgttgggaacattg 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aggattttggcagtcattatgattcttcagagttctatggatcctctgttgggaacattg 361
Query: 976 gcaatattttgtggatcattcatccctttgttgaagagggtgcttagattcagactcgtt 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcaatattttgtggatcattcatccctttgttgaagagggtgcttagattcagactcgtt 421
Query: 1036 cgtcgcatgcgcaggagtttgtttaaatcacctaagaaaaacaggagatctcaggtttct 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 cgtcgcatgcgcaggagtttgtttaaatcacctaagaaaaacaggagatctcaggtttct 481
Query: 1096 gattcaccaccttttcataattctcatgatgaacatgagtacaagatgcaaactaaagag 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gattcaccaccttttcataattctcatgatgaacatgagtacaagatgcaaactaaagag 541
Query: 1156 gactctctgcttcttcggccaaaacctaaaagcttcaccttcacctcttgcaaaccttcc 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 gactctctgcttcttcggccaaaacctaaaagcttcaccttcacctcttgcaaaccttcc 601
Query: 1216 gaacgaggcttctctaggacaccacctaaaatggtgacagaggagttacacccgtccatc 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gaacgaggcttctctaggacaccacctaaaatggtgacagaggagttacacccgtccatc 661
Query: 1276 atacataccacgcctgagagacgaaaatattcagcagcagaatgggacgcgttcacaaag 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 atacataccacgcctgagagacgaaaatattcagcagcagaatgggacgcgttcacaaag 721
Query: 1336 aagtccactgaaaaagcattggaagaacttgttgcttctcctgattttggcaaatggctg 1395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 aagtccactgaaaaagcattggaagaacttgttgcttctcctgattttggcaaatggctg 781
Query: 1396 tccaacaatgcagataggataagtgtaactcccagcaccaaaacggaacagcggcgcagg 1455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 tccaacaatgcagataggataagtgtaactcccagcaccaaaacggaacagcggcgcagg 841
Query: 1456 tgggtgttgtggtcttgaaac 1476
|||||||||||||||||||||
Sbjct: 842 tgggtgttgtggtcttgaaac 862
>gnl|LJGI|FS323590 weakly similar to UniRef100_A7QZB9 Cluster: Chromosome chr7
scaffold_270, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_270, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (35%)
Length = 662
Score = 1273 bits (642), Expect = 0.0
Identities = 642/642 (100%)
Strand = Plus / Plus
Query: 1 atggcgatggcgcgcacccactcttcacgttctgcttggattcttcgcctgttctttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 atggcgatggcgcgcacccactcttcacgttctgcttggattcttcgcctgttctttctt 80
Query: 61 tgtgcttctgcaattcttgcattcgccgatgaacgttccttgtctcttgatcataatact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 tgtgcttctgcaattcttgcattcgccgatgaacgttccttgtctcttgatcataatact 140
Query: 121 acgctgctgcggctatccaatggcttgcctgttcgaaactctcctggtactaagattggt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 acgctgctgcggctatccaatggcttgcctgttcgaaactctcctggtactaagattggt 200
Query: 181 tctactgtgcttgttgaaagagttcatatacatggactaccaaggtttacgaaccttggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctactgtgcttgttgaaagagttcatatacatggactaccaaggtttacgaaccttggg 260
Query: 241 aaattttcccactctgttaaagtgaaggtgttgcctgcaagttcagatgttcgcgtccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaattttcccactctgttaaagtgaaggtgttgcctgcaagttcagatgttcgcgtccca 320
Query: 301 aatatagaggtttgcttccataggaatgcatctcttgcagctgggatgtgcccacaaagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatatagaggtttgcttccataggaatgcatctcttgcagctgggatgtgcccacaaagc 380
Query: 361 caatgggagaaagttaccaagggttattgggctagatcaatgtctccttttgaccacaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatgggagaaagttaccaagggttattgggctagatcaatgtctccttttgaccacaag 440
Query: 421 ctcctagacataaggactgctggttcaacactggaaaattttaaggtgtccactgatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcctagacataaggactgctggttcaacactggaaaattttaaggtgtccactgatgaa 500
Query: 481 gaattttttgcttatcgtgttgtattgttagtattgggcattattttgatgagcacagca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaattttttgcttatcgtgttgtattgttagtattgggcattattttgatgagcacagca 560
Query: 541 gcttttgtcagcaaatcattagtattttattatagcagtgcaatggcaattgggataatt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcttttgtcagcaaatcattagtattttattatagcagtgcaatggcaattgggataatt 620
Query: 601 cttgtggtattgattattctatatcagggcatgaaacttctt 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 cttgtggtattgattattctatatcagggcatgaaacttctt 662
>gnl|LJGI|BW598867 weakly similar to UniRef100_A7QZB9 Cluster: Chromosome chr7
scaffold_270, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr7 scaffold_270, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 422
Score = 176 bits (89), Expect = 3e-43
Identities = 110/117 (94%)
Strand = Plus / Plus
Query: 628 ggcatgaaacttcttccaactggtcggaagagttcccttgctatatttttatattcatct 687
||||||||||||||||| ||||||| |||||||||||||||||||||||||| |||||||
Sbjct: 293 ggcatgaaacttcttcctactggtctgaagagttcccttgctatatttttatcttcatct 352
Query: 688 gctgttggtttcggtggttttctcctccgttatgttcctgacttaatccgttcagta 744
|||||||| |||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 353 gctgttggcttcggtggttttctcctctgttatgttcctgacttaatttgttcagta 409